Identifiers and Description
Gene Model Identifier
TTHERM_00780750Standard Name
RFC4 (Replication factor C subunit 4)Aliases
PreTt01287 | 130.m00097 | 3738.m00033Description
Subunit of Replication factor C (RF-C), which acts as a clamp loader of the proliferating cell nuclear antigen (PCNA)Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- DNA replication factor C complex (IEA) | GO:0005663
Molecular Function
- ATP binding (IEA) | GO:0005524
- DNA clamp loader activity (IEA) | GO:0003689
Biological Process
- DNA replication (IEA) | GO:0006260
Domains
- ( PF04548 ) AIG1 family
- ( PF00004 ) ATPase, AAA family
- ( PF08542 ) Replication factor C
- ( TIGR02881 ) stage V sporulation protein K
- ( PF01078 ) Magnesium chelatase, subunit ChlI
- ( PF06144 ) DNA polymerase III, delta subunit
- ( PF08718 ) Glycolipid transfer protein (GLTP)
- ( TIGR00678 ) DNA polymerase III, delta' subunit
- ( TIGR02397 ) DNA polymerase III, subunit gamma
- ( TIGR02928 ) orc1/cdc6 family replication initiation protein
- ( PF07726 ) ATPase family associated with various
- ( PF07728 ) ATPase family associated with various
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.3%
TetraMine Data
TTHERM_00780750
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_18674.1 9.997093137033517e-262 ATPase, AAA family protein (32
4 aa)
Oxytricha Contig3514.0.g13 6.996820840887259e-117 Replication factor C C-termina
l domain
WormBase WBGene00004338 5.001313616964319e-114 locus:rfc-2 status:Confirmed
UniProt:O44175 protein_id
:CCD63484.1
DictyBase DDB_G0291868 1.9999366565375063e-113 rfc2 on chromosome: 6 position
850606 to 851622
SGD YOL094C 1.9994050701445255e-104 RFC4 Subunit of heteropentamer
ic Replication factor C (RF-C)
, which is a DNA binding prote
in and ATPase that acts as a c
lamp loader of the proliferati
ng cell nuclear antigen (PCNA)
processivity factor for DNA p
olymerases delta and epsilon
Stentor Coeruleus SteCoe_4442 6.991989996645917e-56
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00780750(coding)
ATGGCAAGTAAAGAAATATGGCTTGAGAAGTATCGTCCTCGTACATTAGATGAAGTTTAA
GGTAATGAAGATGCCTTGATCAAGTTAAGAACAATTGCAGAGGAAGGTAACGTCCCAAAT
ATGATATTAGTTGGTCCTCCTGGTATTGGTAAAACTAGTTCAGTACTTTGTTTAGCAAGA
ACACTACTTGCAGATGTATTTGATTCCTGTGCTCTTGAAATGAATGCTTCTGACGAAAGA
GGTATTGATGTTGTCAGAGAAAAAATAAAGAGTTTTGCATAAAAAAAGGTAAATTTAAAG
CCTGGTCTTCATAAAATAATTATTCTTGATGAAGCTGATTCATTAACTGAAGGAGCTTAA
CAGGCTTTAAGAATGATTATTAGTGATTTTGCTGATACTACTAGATTTGTATTAAGTTGT
AATGATAGTTCAAAATTAATTGATGCTATTCAAAGTAGATGTGCTATTTTAAGATTTACT
AAGTTAACTGACGAATAAATATTAAGAAGACTTGAAGAAATTGTAGAAAAAGAAAATATC
AAAATAGATAAGGGAGGTAAAGAAGCTCTACTCTTTACATGTGAAGGAGATATGAGATAA
GCAATTAACAATTTATAAGCTACCTACACTGCTTTCAAACTTGTAAATAAAGAAAATGTC
CTTAAGGTTTGTGATGTCCCAAATGTTGAAGTCCTTTAACAAGTTATTGCAGAATGTGTT
AATGGAAACTTCCATGCTGCTTAAAAGAAACTTTATCCACTATGGGAAGAAGGATATACT
GCTTACGATTTAGTTAACAATTTATATAAACTTATCCAAACTCAAGATATGGATAAATAG
CTTCAATATGAATTTATGAGAGAAATGGCTTTCCTTAAGATGAAAGTTCTTGAAGGCTTG
CCAACATTCTTGCAGATTTCTGGATATCTTGCTAAAATATCTTCTATTGCAAACTCCAAA
AAATGA>TTHERM_00780750(protein)
MASKEIWLEKYRPRTLDEVQGNEDALIKLRTIAEEGNVPNMILVGPPGIGKTSSVLCLAR
TLLADVFDSCALEMNASDERGIDVVREKIKSFAQKKVNLKPGLHKIIILDEADSLTEGAQ
QALRMIISDFADTTRFVLSCNDSSKLIDAIQSRCAILRFTKLTDEQILRRLEEIVEKENI
KIDKGGKEALLFTCEGDMRQAINNLQATYTAFKLVNKENVLKVCDVPNVEVLQQVIAECV
NGNFHAAQKKLYPLWEEGYTAYDLVNNLYKLIQTQDMDKQLQYEFMREMAFLKMKVLEGL
PTFLQISGYLAKISSIANSKK>TTHERM_00780750(gene)
ATGGCAAGTAAAGAAATATGGCTTGAGAAGTACTTTTTTAGCATTAATTAGAATTAGCAT
TGAAAATTAATAATTAATTGCTATATTTTAACTGCCATTAAATAAATAATATAATATACT
TATTAGGTATCGTCCTCGTACATTAGATGAAGTTTAAGGTAATGAAGATGCCTTGATCAA
GTTAAGAACAATTGCAGAGGAAGGTAACGTCCCAAATATGATATTAGTTGGTCCTCCTGG
TATTGGTAAAACTAGTTCAGTACTTTGTTTAGCAAGAACACTACTTGCAGATGTATTTGA
TTCCTGTGCTCTTGAAATGAATGCTTCTGACGAAAGAGGTATTGATGTTGTCAGAGAAAA
AATAAAGAGTTTTGCATAAAAAAAGGTAAATTTAAAGCCTGGTCTTCATAAAATAATTAT
TCTTGATGAAGCTGATTCATTAACTGAAGGAGCTTAACAGGTAATTAGGATTATTTTCAT
TTTTTTATTTTCCCTCTCTTTTTTGTTTTTTAAACAAGTGCGCCAAAAGGAAAATGGCTC
TGAGCATTAGAATATTTGATTAATATAAACAAATTAAGAGATAGTTTAATTTTTTTCTTT
ATAATTTATAGGCTTTAAGAATGATTATTAGTGATTTTGCTGATACTACTAGATTTGTAT
TAAGTTGTAATGATAGTTCAAAATTAATTGATGCTATTCAAAGTAGATGTGCTATTTTAA
GATTTACTAAGTTAACTGACGAATAAATATTAAGAAGACTTGAAGAAATTGTAGAAAAAG
AAAATATCAAAATAGATAAGGGAGGTAAAGAAGCTCTACTCTTTACATGTGAAGGAGATA
TGAGATAAGCAATTAACAATTTATAAGCTACCTACACTGCTTTCAAACTTGTAAATAAAG
AAAATGTCCTTAAGGTTTGTGATGTCCCAAATGTTGAAGTCCTTTAACAAGTTATTGCAG
AATGTGTTAATGGAAACTTCCATGCTGCTTAAAAGAAACTTTATCCACTATGGGAAGAAG
GATATACTGCTTACGATTTAGTTAACAATTTATATAAACTTATCCAAACTCAAGATATGG
ATAAATAGCTTCAATATGAATTTATGAGAGAAATGGCTTTCCTTAAGATGAAAGTTCTTG
AAGGCTTGCCAACATTCTTGCAGATTTCTGGATATCTTGCTAAAATATCTTCTATTGCAA
ACTCCAAAAAATGA