Identifiers and Description
Gene Model Identifier
TTHERM_00939110Standard Name
RFC1 (Homolog of Replication factor C subunit 1)Aliases
PreTt03760 | 170.m00089Description
RFC1 BRCT domain protein; BRCA1 C Terminus (BRCT) domain; AAA+ ATpase with a BRCT domain at the N-terminus (Cryptosporidium parvum)Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- DNA replication factor C complex (IEA) | GO:0005663
- intracellular (IEA) | GO:0005622
Molecular Function
- ATP binding (IEA) | GO:0005524
- DNA clamp loader activity (IEA) | GO:0003689
Biological Process
- DNA replication (IEA) | GO:0006260
Domains
- ( PF03047 ) COMC family
- ( PF00004 ) ATPase, AAA family
- ( PF08243 ) SPT2 chromatin protein
- ( PF04702 ) Vicilin N terminal region
- ( PF00533 ) BRCA1 C Terminus (BRCT) domain
- ( PF03215 ) Rad17 cell cycle checkpoint protein
- ( PF08519 ) Replication factor RFC1 C terminal
- ( TIGR02397 ) DNA polymerase III, subunit gamma
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.7%
TetraMine Data
TTHERM_00939110
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_19334.1 9.997093137033517e-262 BRCT domain-containing protein
(1154 aa)
Oxytricha Contig2682.0.g45 1.9999788875029746e-125 Replication factor RFC1 C term
inal domain
WormBase WBGene00004337 1.999618694399617e-70 locus:rfc-1 status:Confirmed
UniProt:Q18841 protein_id
:CAA99812.1
SGD YOR217W 7.000846320060671e-65 RFC1 Subunit of heteropentamer
ic Replication factor C (RF-C)
, which is a DNA binding prote
in and ATPase that acts as a c
lamp loader of the proliferati
ng cell nuclear antigen (PCNA)
processivity factor for DNA p
olymerases delta and epsilon
DictyBase DDB_G0285961 2.998990600740728e-62 rfc1 on chromosome: 4 position
3845828 to 3850119
Stentor Coeruleus SteCoe_1680 7.667648073722e-53
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00939110(coding)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAACTAAGGAAATAAAGCATGAA
GAACCTAAAAAATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAA
AGAAATTTTAGTTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAG
TAGAAAAAAGAAGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACT
GAAGAATTATCTGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAA
AATAAATCTTCCAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAA
GCGAAAGACGTAAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGAT
CCCAAGTAATCAAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGT
ATTAATGATGAAGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGG
AGCCAAAAAAAAATAAAATGA>TTHERM_00939110(protein)
MKKNNQSNSLLKYFSKQDTKTVNNSQNSSKDKDKEKDSKEKTKESSSKTQYKQTKEIKHE
EPKKQEQNKKQNEQKEEKEKRNFSQDIKNTRSTPIKKVQEQKKEEIKSSKNKMNVENSGT
EELSATESLTEPALSENEEKNKSSNQNKGRNVSSDNKQQQAKDVKMNQSQTRSNDNKKVD
PKQSSKKPQKKNETDDDDYGINDEEEDLPKNSKQKKLVQGSQKKIK>TTHERM_00939110(gene)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAAGTAAATTATTTTTTTAATGA
TGATATTCTTCTACTATTTTGAAATAAAGCTAAGGAAATAAAGCATGAAGAACCTAAAAA
ATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAAAGAAATTTTAG
TTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAGTAGAAAAAAGA
AGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACTGAAGAATTATC
TGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAAAATAAATCTTC
CAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAAGCGAAAGACGT
AAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGATCCCAAGTAATC
AAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGTATTAATGATGA
AGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGGAGCCAAAAAAA
AATAAAATGA