Identifiers and Description
Gene Model Identifier
TTHERM_00008800Standard Name
REX4 (RNA exonuclease REX4)Aliases
PreTt11690 | 1.m00738Description
REX4 RNA exonuclease 1 DEDDh 3-prime-5-prime exonuclease domain proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
Molecular Function
- exonuclease activity (IEA) | GO:0004527
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10%
TetraMine Data
TTHERM_00008800
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_02853.1 6.001622120184464e-159 exonuclease (374 aa)
SGD YOL080C 3.998097515166115e-39 REX4 Putative RNA exonuclease
possibly involved in pre-rRNA
processing and ribosome assemb
ly
Oxytricha Contig15694.0.g12 1.0000633497921574e-36 Exonuclease
WormBase WBGene00012465 2.998800627344286e-26 status:Confirmed UniProt:Q9X
XI3 protein_id:CAA19458.1
DictyBase DDB_G0291590 2.000769134519826e-18 rexo1 on chromosome: 6 positio
n 580025 to 582109
Stentor Coeruleus SteCoe_19045 0.000000000000001713908431542013
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00008800(coding)
ATGGTTGACTAAGTAGAAGATTTAGAATTAATCAAAAAGGAGAAAGATTCTTAATTAAAG
ATACTTGAATCCCTTGATTTTAGTTGTTACAACTCTAATAAAGATGATTTAGAAGAGCAA
TTTGGTGGATAGGTGAAAAAAAAGTTCAAAAATTAATTTGGAGATGCCAAAAATGTTCAT
TAGAAAGATAGAAAATTTAATAAAGTTTAGAAAACTGAATAGAAAAATGAATAATAAACA
GATGAATAATAGAAAGATAATCAGGAAAATGGGGAAGAAGTAAAATAATAGAAATAAATT
AGAAATGTAAAATAAAAAGCTCCATAGGAAGTTTCTAGTAATTGGAAAAAGTTTATGAGT
AGTCAACCTACTCAAAGCAATGACAATGAAGACAATAGCTCTAAAAAATAAATAACCAAT
AAAAAAAGTTAGTCAAGTGAAAGCTCGGGTAATTAATAAAATGTATTTAAGTCCTTAGAA
CCTTAAAAAGATGGATATAAAGGAGTAACTCCCATAGTTGCAATAGATTGTGAAATGGTT
CAGTGCGAAGCTAGCCAAAAAGACGGCTTTCCTACTTAAGAACTGGCTAGAGTATCTATA
GTAAATTATAATGGACATGTTCTTTTAGATACCTATGTAAGACCTCAAAAGAAAATTAAA
AATTATTTGACTAAAGTTAGTGGTATCACATTTACTCACATAAAAAATGCTCCTACTTAT
CCAGAGGTTAAAAACAAAATATTTGAGATACTTAAAGACAAAATTATAGTAGGTCATTCA
GTATAGCATGATTTGAGTTCCATCAAATTTGAGCCTCCCAAAGATAAAATGATCAGAGAT
ATCTCAAATTATAAAGAACTTAAGTAATCAGGAAAAAAGGTTTCTCTTAAAAAGATGGTT
AAATAAGAATTAGGAATTACCTTCCAAGAAGGCTCTCACGACTCTATTTCTGATGCAAGA
GCAGCTTTGTTGATATATAAAAAATATTAAAAGCAAATAGACTAAGAACAAGGCAAGAAA
TGA>TTHERM_00008800(protein)
MVDQVEDLELIKKEKDSQLKILESLDFSCYNSNKDDLEEQFGGQVKKKFKNQFGDAKNVH
QKDRKFNKVQKTEQKNEQQTDEQQKDNQENGEEVKQQKQIRNVKQKAPQEVSSNWKKFMS
SQPTQSNDNEDNSSKKQITNKKSQSSESSGNQQNVFKSLEPQKDGYKGVTPIVAIDCEMV
QCEASQKDGFPTQELARVSIVNYNGHVLLDTYVRPQKKIKNYLTKVSGITFTHIKNAPTY
PEVKNKIFEILKDKIIVGHSVQHDLSSIKFEPPKDKMIRDISNYKELKQSGKKVSLKKMV
KQELGITFQEGSHDSISDARAALLIYKKYQKQIDQEQGKK>TTHERM_00008800(gene)
ATGGTTGACTAAGTAGAAGATTTAGAATTAATCAAAAAGGAGAAAGATTCTTAATTAAAG
ATACTTGAATCCCTTGATTTTAGTTGTTACAACTCTAATAAAGATGATTTAGAAGAGCAA
TTTGGTGGATAGGTGAAAAAAAAGTTCAAAAATTAATTTGGAGATGCCAAAAATGTTCAT
TAGAAAGATAGAAAATTTAATAAAGTTTAGAAAACTGAATAGAAAAATGAATAATAAACA
GATGAATAATAGAAAGATAATCAGGAAAATGGGGAAGAAGTAAAATAATAGAAATAAATT
AGAAATGTAAAATAAAAAGCTCCATAGGAAGTTTCTAGTAATTGGAAAAAGTTTATGAGT
AGTCAACCTACTCAAAGCAATGACAATGAAGACAATAGCTCTAAAAAATAAATAACCAAT
AAAAAAAGTTAGTCAAGTGAAAGCTCGGGTAATTAATAAAATGTATTTAAGTCCTTAGAA
CCTTAAAAAGATGGATATAAAGGAGTAACTCCCATAGTTGCAATAGATTGTGAAATGGTT
CAGTGCGAAGCTAGCCAAAAAGACGGCTTTCCTACTTAAGAACTGGCTAGAGTATCTATA
GTAAATTATAATGGACATGTTCTTTTAGATACCTATGTAAGACCTCAAAAGAAAATTAAA
AATTATTTGACTAAAGTTAGTGGTATCACATTTACTCACATAAAAAATGCTCCTACTTAT
CCAGAGGTTAAAAACAAAATATTTGAGATACTTAAAGACAAAATTATAGTAGGTCATTCA
GTATAGCATGATTTGAGTTCCATCAAATTTGAGCCTCCCAAAGATAAAATGATCAGAGAT
ATCTCAAATTATAAAGAACTTAAGTAATCAGGAAAAAAGGTTTCTCTTAAAAAGATGGTT
AAATAAGAATTAGGAATTACCTTCCAAGAAGGCTCTCACGACTCTATTTCTGATGCAAGA
GCAGCTTTGTTGATATATAAAAAATATTAAAAGCAAATAGACTAAGAACAAGGCAAGAAA
TGA