Identifiers and Description

Gene Model Identifier

TTHERM_00008800

Standard Name

REX4 (RNA exonuclease REX4)

Aliases

PreTt11690 | 1.m00738

Description

REX4 RNA exonuclease 1 DEDDh 3-prime-5-prime exonuclease domain protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• exonuclease activity (IEA) | GO:0004527

Domains

• ( PF00929 ) exonuclease
• ( PF06519 ) TolA protein
• ( TIGR01406 ) DNA polymerase III, epsilon subunit
• ( PF08555 ) Eukaryotic family of unknown function

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00008800

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02853.1	6.001622120184464e-159	exonuclease (374 aa)
SGD	YOL080C	3.998097515166115e-39	REX4 Putative RNA exonuclease possibly involved in pre-rRNA processing and ribosome assemb ly
Oxytricha	Contig15694.0.g12	1.0000633497921574e-36	Exonuclease
WormBase	WBGene00012465	2.998800627344286e-26	status:Confirmed UniProt:Q9X XI3 protein_id:CAA19458.1
DictyBase	DDB_G0291590	2.000769134519826e-18	rexo1 on chromosome: 6 positio n 580025 to 582109
Stentor Coeruleus	SteCoe_19045	0.000000000000001713908431542013

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00008800(coding)
ATGGTTGACTAAGTAGAAGATTTAGAATTAATCAAAAAGGAGAAAGATTCTTAATTAAAG
ATACTTGAATCCCTTGATTTTAGTTGTTACAACTCTAATAAAGATGATTTAGAAGAGCAA
TTTGGTGGATAGGTGAAAAAAAAGTTCAAAAATTAATTTGGAGATGCCAAAAATGTTCAT
TAGAAAGATAGAAAATTTAATAAAGTTTAGAAAACTGAATAGAAAAATGAATAATAAACA
GATGAATAATAGAAAGATAATCAGGAAAATGGGGAAGAAGTAAAATAATAGAAATAAATT
AGAAATGTAAAATAAAAAGCTCCATAGGAAGTTTCTAGTAATTGGAAAAAGTTTATGAGT
AGTCAACCTACTCAAAGCAATGACAATGAAGACAATAGCTCTAAAAAATAAATAACCAAT
AAAAAAAGTTAGTCAAGTGAAAGCTCGGGTAATTAATAAAATGTATTTAAGTCCTTAGAA
CCTTAAAAAGATGGATATAAAGGAGTAACTCCCATAGTTGCAATAGATTGTGAAATGGTT
CAGTGCGAAGCTAGCCAAAAAGACGGCTTTCCTACTTAAGAACTGGCTAGAGTATCTATA
GTAAATTATAATGGACATGTTCTTTTAGATACCTATGTAAGACCTCAAAAGAAAATTAAA
AATTATTTGACTAAAGTTAGTGGTATCACATTTACTCACATAAAAAATGCTCCTACTTAT
CCAGAGGTTAAAAACAAAATATTTGAGATACTTAAAGACAAAATTATAGTAGGTCATTCA
GTATAGCATGATTTGAGTTCCATCAAATTTGAGCCTCCCAAAGATAAAATGATCAGAGAT
ATCTCAAATTATAAAGAACTTAAGTAATCAGGAAAAAAGGTTTCTCTTAAAAAGATGGTT
AAATAAGAATTAGGAATTACCTTCCAAGAAGGCTCTCACGACTCTATTTCTGATGCAAGA
GCAGCTTTGTTGATATATAAAAAATATTAAAAGCAAATAGACTAAGAACAAGGCAAGAAA
TGA

>TTHERM_00008800(protein)
MVDQVEDLELIKKEKDSQLKILESLDFSCYNSNKDDLEEQFGGQVKKKFKNQFGDAKNVH
QKDRKFNKVQKTEQKNEQQTDEQQKDNQENGEEVKQQKQIRNVKQKAPQEVSSNWKKFMS
SQPTQSNDNEDNSSKKQITNKKSQSSESSGNQQNVFKSLEPQKDGYKGVTPIVAIDCEMV
QCEASQKDGFPTQELARVSIVNYNGHVLLDTYVRPQKKIKNYLTKVSGITFTHIKNAPTY
PEVKNKIFEILKDKIIVGHSVQHDLSSIKFEPPKDKMIRDISNYKELKQSGKKVSLKKMV
KQELGITFQEGSHDSISDARAALLIYKKYQKQIDQEQGKK

>TTHERM_00008800(gene)
ATGGTTGACTAAGTAGAAGATTTAGAATTAATCAAAAAGGAGAAAGATTCTTAATTAAAG
ATACTTGAATCCCTTGATTTTAGTTGTTACAACTCTAATAAAGATGATTTAGAAGAGCAA
TTTGGTGGATAGGTGAAAAAAAAGTTCAAAAATTAATTTGGAGATGCCAAAAATGTTCAT
TAGAAAGATAGAAAATTTAATAAAGTTTAGAAAACTGAATAGAAAAATGAATAATAAACA
GATGAATAATAGAAAGATAATCAGGAAAATGGGGAAGAAGTAAAATAATAGAAATAAATT
AGAAATGTAAAATAAAAAGCTCCATAGGAAGTTTCTAGTAATTGGAAAAAGTTTATGAGT
AGTCAACCTACTCAAAGCAATGACAATGAAGACAATAGCTCTAAAAAATAAATAACCAAT
AAAAAAAGTTAGTCAAGTGAAAGCTCGGGTAATTAATAAAATGTATTTAAGTCCTTAGAA
CCTTAAAAAGATGGATATAAAGGAGTAACTCCCATAGTTGCAATAGATTGTGAAATGGTT
CAGTGCGAAGCTAGCCAAAAAGACGGCTTTCCTACTTAAGAACTGGCTAGAGTATCTATA
GTAAATTATAATGGACATGTTCTTTTAGATACCTATGTAAGACCTCAAAAGAAAATTAAA
AATTATTTGACTAAAGTTAGTGGTATCACATTTACTCACATAAAAAATGCTCCTACTTAT
CCAGAGGTTAAAAACAAAATATTTGAGATACTTAAAGACAAAATTATAGTAGGTCATTCA
GTATAGCATGATTTGAGTTCCATCAAATTTGAGCCTCCCAAAGATAAAATGATCAGAGAT
ATCTCAAATTATAAAGAACTTAAGTAATCAGGAAAAAAGGTTTCTCTTAAAAAGATGGTT
AAATAAGAATTAGGAATTACCTTCCAAGAAGGCTCTCACGACTCTATTTCTGATGCAAGA
GCAGCTTTGTTGATATATAAAAAATATTAAAAGCAAATAGACTAAGAACAAGGCAAGAAA
TGA