Identifiers and Description
Gene Model Identifier
TTHERM_00421200Standard Name
REX1 (RNA exonuclease REX1)Aliases
PreTt07244 | 46.m00299 | 3679.m00149 | RNH70Description
REX1 exonucleaseGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
Molecular Function
- nucleic acid binding (IEA) | GO:0003676
- 3'-5' exonuclease activity (IEA) | GO:0008408
Biological Process
- nucleobase-containing compound metabolic process (IEA) | GO:0006139
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.8%
TetraMine Data
TTHERM_00421200
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10952.1 9.997093137033517e-262 exonuclease (584 aa)
SGD YGR276C 1.9994920269952867e-34 RNH70 3-5 exoribonuclease; req
uired for maturation of 3 ends
of 5S rRNA and tRNA-Arg3 from
dicistronic transcripts
DictyBase DDB_G0291590 9.99723014177113e-33 rexo1 on chromosome: 6 positio
n 580025 to 582109
WormBase WBGene00015462 2.0008113830639685e-30 status:Confirmed UniProt:O16
312 protein_id:CCD63091.1
Oxytricha Contig22416.0.g98 2.000769134519826e-18 Exonuclease
Stentor Coeruleus SteCoe_36101 0.0000000000006914400106940203
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00421200(coding)
ATGGAAAAACCAAGCTAATAAGGAACATATGTTTCAATATTCTAGTAACTACAAAGCTAA
AAAAGCTAGACAACAGGAAGCTCATCAATATTTAGTGGCTTAATGAAAACATAGTCTAGT
GATATTATATAAACATCTTCATAAAAGTCTAGCAAAAAAAATAAAAAACCTAACTTATAA
GATTTAGAATAAAGCTCAACTACTCTGAAAAAGATACAAACTAGTTAAGATCAGGCACCA
AAAGATGAATGTGAAATATCTTAGGAATCAATCAATAATAAATAAACAAGCAAATAGGAG
ATAAAAAATAAAATTGAAATAGTTGATCATGCTAAACCCCGCAAATAAACATCAACAAGA
GTATTTTAAAGTTTACTGTAATGGTTATTTACTAAATAAGGAATAAATCCACTTTGGATT
ATGATAGAAGATAGACACCTAATTTAGAATTTTGTATATATTACATTAACTGTACCTCCT
GATTTTGAAAAGCGCTTGTTAGCTAAATAGGATTTTCCTTTTTTAGGTTAATATTATGAT
TAGAAAAATATTGCAGTTTTTAAAGAAAGAACAGTTCAAAATGAAGATAATTATTGGCAT
TCCCTATTCTAAACAAAGTTAACAGAAGATATTTCTCTTCCACTCTTTAACAAAAATACA
GTCTCTCCCTAATAATAAATAAACTAAGAGTAGTATTAAGCAATGACTTATGAAGAAAAA
CTATATTATAAATATTCATAATTTTGTCATTCTAAATAGACTCTTAAGAATAATTTGTAT
CCTACTGAGAGTGAAGACTTTCCTAATTATGTTAGCTCAACTGAGAGTACATTAAAATTT
GACACAGTTAAATTTGAAAACAAAATTCTTGGATTAGATTGTGAAATGGTTTCAACTGAG
TATGGTTTAGAGCTTGCAAGAATAAGTTTAGTTAATTTCGATGGTGAAGTTTTGATAGAC
TAACTGGTAAAAACGCCAAATAGGATTATAAATTATAACACTTAATATAGTGGAATAACA
TAAGAAATGTTAAAAGATGTAAAAGTAGATTTACAGTAAGCACAGAAACTACTATTTTAG
TATGTTTGCTAAGACACCATTCTCATAGGACATTCTTTAGAGAATGATTTAGTAGCTATG
CAAGTAATTCATAACAAGGTTATAGACACAAGTATATTATTTTTGACAAAGAATGAAAGA
AAGCTAAAATTAAAGGATTTGGCCTAAAAATTTTTGAATTGCAAAATTTAGTAAGGTTCT
CACTGTCCTTCAGAAGATGCAAAAAGTGCATTAAGCTTAGCAAAATTGAGAATTGAAATA
TTAGAAAAGTTTGATAATTCTAAAATAATAAGTGGAACCAGCTAAATTACACTAGATTTA
CTCGATTAAATTATAAAAACAAATAACACTATTTTAATCTTAGACGAAACTGACTAATTA
ATGAGGTTACTTTAATATGGAGTACATTATGATGAGTTAAAGCAAAATAGTAACGAATAA
AGATTAGATAAAATTGTTAAATGGGTGAAGAAGAAAAAGAAAGAAAATTGCATCATTCCA
AGAATAATAATGACATAATTAATAAAAGAGAAAAAATAAATGAGCTATAAAGACTTAGAT
AGTAAATTCAAAGAAATAGTAGATAACTCTCCTTAAAATTCAGTATTTGCTTTCAATTTT
GAAATAGAAGATGATAAATCTTTAAACAACAGTTTAAATGTATCTAACCCATTTTGCATA
TTTGTGTCCATTTGA>TTHERM_00421200(protein)
MEKPSQQGTYVSIFQQLQSQKSQTTGSSSIFSGLMKTQSSDIIQTSSQKSSKKNKKPNLQ
DLEQSSTTLKKIQTSQDQAPKDECEISQESINNKQTSKQEIKNKIEIVDHAKPRKQTSTR
VFQSLLQWLFTKQGINPLWIMIEDRHLIQNFVYITLTVPPDFEKRLLAKQDFPFLGQYYD
QKNIAVFKERTVQNEDNYWHSLFQTKLTEDISLPLFNKNTVSPQQQINQEQYQAMTYEEK
LYYKYSQFCHSKQTLKNNLYPTESEDFPNYVSSTESTLKFDTVKFENKILGLDCEMVSTE
YGLELARISLVNFDGEVLIDQLVKTPNRIINYNTQYSGITQEMLKDVKVDLQQAQKLLFQ
YVCQDTILIGHSLENDLVAMQVIHNKVIDTSILFLTKNERKLKLKDLAQKFLNCKIQQGS
HCPSEDAKSALSLAKLRIEILEKFDNSKIISGTSQITLDLLDQIIKTNNTILILDETDQL
MRLLQYGVHYDELKQNSNEQRLDKIVKWVKKKKKENCIIPRIIMTQLIKEKKQMSYKDLD
SKFKEIVDNSPQNSVFAFNFEIEDDKSLNNSLNVSNPFCIFVSI>TTHERM_00421200(gene)
ATGGAAAAACCAAGCTAATAAGGAACATATGTTTCAATATTCTAGTAACTACAAAGCTAA
AAAAGCTAGACAACAGGAAGCTCATCAATATTTAGTGGCTTAATGAAAACATAGTCTAGT
GATATTATATAAACATCTTCATAAAAGTCTAGCAAAAAAAATAAAAAACCTAACTTATAA
GATTTAGGTAGAAATAAGTTAAAAATATAACGAAATTAATATATCTTTTTAAAATATATA
AGAATAAAGCTCAACTACTCTGAAAAAGATACAAACTAGTTAAGATCAGGCACCAAAAGA
TGAATGTGAAATATCTTAGGAATCAATCAATAATAAATAAACAAGCAAATAGGAGATAAA
AAATAAAATTGAAATAGTTGATCATGCTAAACCCCGCAAATAAACATCAACAAGAGTATT
TTAAAGTTTACTGTAATGGTTATTTACTAAATAAGGAATAAATCCACTTTGGATTATGAT
AGAAGTAAATCATATTCGAGAGTTAATTTTTATTTACTTATTAATTCTTAATATCTAAAG
GATAGACACCTAATTTAGAATTTTGTATATATTACATTAACTGTACCTCCTGATTTTGAA
AAGCGCTTGTTAGCTAAATAGGATTTTCCTTTTTTAGGTTAATATTATGATTAGAAAAAT
ATTGCAGTTTTTAAAGAAAGAACAGTTCAAAATGAAGATAATTATTGGCATTCCCTATTC
TAAACAAAGTTAACAGAAGATATTTCTCTTCCACTCTTTAACAAAAATACAGTCTCTCCC
TAATAATAAATAAACTAAGAGTAGTATTAAGCAATGACTTATGAAGAAAAACTATATTAT
AAATATTCATAATTTTGTCATTCTAAATAGACTCTTAAGAATAATTTGTATCCTACTGAG
AGTGAAGACTTTCCTAATTATGTTAGCTCAACTGAGAGTACATTAAAATTTGACACAGTT
AAATTTGAAAACAAAATTCTTGGATTAGATTGTGAAATGGTATTCGAAAATTATTATTAA
TAATAAATAAATAAATATTAAAGTGGGTTAATTAAATATTAGGTTTCAACTGAGTATGGT
TTAGAGCTTGCAAGAATAAGTTTAGTTAATTTCGATGGTGAAGTTTTGATAGACTAACTG
GTAAAAACGCCAAATAGGATTATAAATTATAACACTTAATATAGTGGAATAACATAAGAA
ATGTTAAAAGATGTAAAAGTAGATTTACAGTAAGCACAGAAACTACTATTTTAGTATGTT
TGCTAAGACACCATTCTCATAGGACATTCTTTAGAGAATGATTTAGTAGCTATGCAAGTA
TTTATTTAGTTATTTTTTAGGTCATAATTATATATAAATAATCTCATGAAAAAATTAAAG
GTAATTCATAACAAGGTTATAGACACAAGTATATTATTTTTGACAAAGAATGAAAGAAAG
CTAAAATTAAAGGATTTGGCCTAAAAATTTTTGAATTGCAAAATTTAGTAAGGTTCTCAC
TGTCCTTCAGAAGATGCAAAAAGTGCATTAAGCTTAGCAAAATTGAGAATTGAAATATTA
GAAAAGTTTGATAATTCTAAAATAATAAGTGGAACCAGCTAAATTACACTAGATTTACTC
GATTAAATTATAAAAACAAATAACACTATTTTAATCTTAGACGAAACTGACTAATTAATG
AGGTTACTTTAATATGGAGTACATTATGATGAGTTAAAGCAAAATAGTAACGAATAAAGT
ATTTTACACTAATTAATTAATGATATAAGCTAAATAAAATTTTATTTTAAATTAGGATTA
GATAAAATTGTTAAATGGGTGAAGAAGAAAAAGAAAGAAAATTGCATCATTCCAAGAATA
ATAATGACATAATTAATAAAAGAGAAAAAATAAATGAGCTATAAAGACTTAGATAGTAAA
TTCAAAGAAATAGTAGATAACTCTCCTTAAAATTCAGGTATATAAATCCATATCTGATTC
ATTCATTAAATCTTAATTTTATTCTAAAAAATAGTATTTGCTTTCAATTTTGAAATAGAA
GATGATAAATCTTTAAACAACAGTTTAAATGTATCTAACCCATTTTGCATATTTGTGTCC
ATTTGA