Gene Model Identifier
TTHERM_00094000
Standard Name
RDN2
Aliases
PreTt16555 | 6.m00629 | 3836.m02213
Description
Nucleotidyltransferase; exhibits RNA terminal uridine transferase activity in vitro; involved in 23-24 nt small RNA metabolism
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Cellular Component
( PF03828 ) PAP/25A associated domain
( PF01909 ) Nucleotidyltransferase domain
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00094000
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No Data fetched for StockID
(v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_02566.1 2.0004485223439647e-69 hypothetical protein (538 aa)
DictyBase DDB_G0268914 0.00000000000009996062864481225 DDB_G0268914 on chromosome: 1
Oxytricha Contig10883.0.g40 0.000000000004997916451710233 Nucleotidyltransferase domain
WormBase WBGene00001596 0.0000000039998859049333245 locus:gld-2 Poly(A) RNA poly
No Data fetched for General Information
Ref:22706992 : Talsky KB, Collins K (2012) Strand-asymmetric endogenous Tetrahymena small RNA production requires a previously uncharacterized uridylyltransferase protein partner. RNA (New York, N.Y.) 18(8):1553-62Ref:20622019 : Talsky KB, Collins K (2010) Initiation by a eukaryotic RNA-dependent RNA polymerase requires looping of the template end and is influenced by the template-tailing activity of an associated uridyltransferase. The Journal of biological chemistry 285(36):27614-23Ref:19656801 : Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32Ref:19451546 : Lee SR, Talsky KB, Collins K (2009) A single RNA-dependent RNA polymerase assembles with mutually exclusive nucleotidyl transferase subunits to direct different pathways of small RNA biogenesis. RNA (New York, N.Y.) 15(7):1363-74
>TTHERM_00094000(coding)ATG GAA GGC GAT TTC TTT TAG CAA ACA TTT CTA AAA TAT ATA AAG TAT AGA CCA AGC AAG AAT ATA AAT GTG CAT TAG TAT TTA TTG AAG AAA TTA GAA GTT GAG TAA TTA AGT TAA AGT TAA TTA TTA AGC TTA AAA AAT AGT TTA GAT GAT TTT ATT CGT AAA TAT AAT TTT CAT AAT GAT GAA TGG ATT CTA ATT AGT CTA ATT GAA AAT TTA GCA CAT TCA GAC TTA TTA TTT TCA AGC GAT ACT GAA AAA TAT ATT TTA ATT ATT AAG AAA AGA TTC TAC CTC AAT TTA CTG AAT AAA CTT GAG AAT AAT ATT TCA AGT AAA TTT GAT CTT TAG GAG CTC TAG AAG TGT TTA AAG TCA TTT TAC TTA AGC TAT AAA AAT AAT GTT TAT GAT TTG TTT TTA AAT GCT TCA AAT GAT ATT TAA ATA ATA AAG TAG ATA GAT AGC AAC CTA GGA GAA AAA TTA AAA AAA ATT GAA AAG CAT GTA TCT GAG ATT TTA AAG AGG CTT AAA AGT AAT GAA TCG TAG TAA ATG TCT ATT AAT TAG AAT GAG TAG AAC ATC TAA TAA AAT AAA GAA AAT ATT AAT GAA ATA ACC AGT AGC AAT TAA TTA GAA ATT TTA TTA AAT TAA ATT TAT AAG TAA GAA AAG ATC AGT ATT TAG TTT AAT GAA GAA TTA CTT AAT CAA GAA GTC AAT ATG GTA AAT TAA ATT GTG AGT GAG ATG AAT TTA AAT AAA ATT ATT GGG CTA TAA AAT GTG TAT GTT CAT CCG TAT GGG TCA GTT GTT AGT GGG TTT GGT TAG AAT GAT AGT GAC ATT GAT ATA AGC ATA AAT ACA GAT TGC TAT TTA GAT GAA AGA GTA TTT CTT TCT CTT ATT TAT GAT TTC ATG AAA AAT TAT TTG CAT AAA TAT AAA ATC AAA TAT TAA AAA CTT GAA TTA AAA TTA GAT GCG CGT ATT CCT TTA ATA ACT CTT GTT AAA CAG AAA GAT AAT GTT AAT TTG AAA AGT AAT ACA GTT TCA ATA GAC ATA TGT ATA AAT AAT CTA CTA GGA TGC GCA AAT TCA AAA ATG CTA AAA GTT ATA TCT TAG ATT CAT CCC TTA GTA AAG TAG CTA GGA ATA ATC ATT AAA TAT TGG GCG AAG TAG AAT GGT CTT ATA AGC AAA AAA ACT CTT AGT TCA TAT GCA TTT ATC CTC ATA ATG ATC TGC TTT TTA TAG AGA AAG AAG CTA ATT GAT CCT TAT TTT TAA GAG AAA GTT TAA AAA AGA TAA AGT GAT CCA AAA TAT TCT ACT TTG ATT AAG AGG ACA AAG GAA ACT GAT TAG GAA TTT TAA ACA AAC CTT TAT TAT GTG CAA GAT CCC TCG CAT TTA CAG AAA TCT CTA AAA AAG TAT AAA GAA AAC AAT CCA AAC TAA AAA ACT TTA TTA GAC ATG AAT CTT GCA AGC TTA TTC AGT GAG TTT ATT GAA TAT TAC TCA GAC ACC ACT GAT GAG AAT AGA AGA TAT ATA GAT ATT ATG AAT AAT TAT ATA GTA AAA TCA TAT AAT AAA AAT TTA TTC TTT TAT ATT ATT GAC CCA TTT GAT AAT TAT CAT AAC CCA GGA GAA AGA AGC AGA GTA GAG AAT ATA GAT GAT AAC ATA TTT ATA AAT AGA TTT AGG TTT GCT AAG TAA AAA TTG CAA GAC AAA CAA TAT TCG CAA ATA TTT GAA TTA AAA TTT CAA TGA >TTHERM_00094000(protein)M E G D F F Q Q T F L K Y I K Y R P S K N I N V H Q Y L L K K L E V E Q L S Q S Q L L S L K N S L D D F I R K Y N F H N D E W I L I S L I E N L A H S D L L F S S D T E K Y I L I I K K R F Y L N L L N K L E N N I S S K F D L Q E L Q K C L K S F Y L S Y K N N V Y D L F L N A S N D I Q I I K Q I D S N L G E K L K K I E K H V S E I L K R L K S N E S Q Q M S I N Q N E Q N I Q Q N K E N I N E I T S S N Q L E I L L N Q I Y K Q E K I S I Q F N E E L L N Q E V N M V N Q I V S E M N L N K I I G L Q N V Y V H P Y G S V V S G F G Q N D S D I D I S I N T D C Y L D E R V F L S L I Y D F M K N Y L H K Y K I K Y Q K L E L K L D A R I P L I T L V K Q K D N V N L K S N T V S I D I C I N N L L G C A N S K M L K V I S Q I H P L V K Q L G I I I K Y W A K Q N G L I S K K T L S S Y A F I L I M I C F L Q R K K L I D P Y F Q E K V Q K R Q S D P K Y S T L I K R T K E T D Q E F Q T N L Y Y V Q D P S H L Q K S L K K Y K E N N P N Q K T L L D M N L A S L F S E F I E Y Y S D T T D E N R R Y I D I M N N Y I V K S Y N K N L F F Y I I D P F D N Y H N P G E R S R V E N I D D N I F I N R F R F A K Q K L Q D K Q Y S Q I F E L K F Q >TTHERM_00094000(gene)ATG GAA GGC GAT TTC TTT TAG CAA ACA TTT CTA AAA TAT ATA AAG TAT AGA CCA AGC AAG AAT ATA AAT GTG CAT TAG TAT TTA TTG AAG AAA TTA GAA GTT GAG TAA TTA AGT TAA AGT TAA TTA TTA AGC TTA AAA AAT AGT TTA GAT GAT TTT ATT CGT AAA TAT AAT TTT CAT AAT GAT GAA TGG ATT CTA ATT AGT CTA ATT GAA AAT TTA GCA CAT TCA GAC TTA TTA TTT TCA AGC GAT ACT GAA AAA TAT ATT TTA ATT ATT AAG AAA AGA TTC TAC CTC AAT TTA CTG AAT AAA CTT GAG AAT AAT ATT TCA AGT AAA TTT GAT CTT TAG GAG CTC TAG AAG TGT TTA AAG TCA TTT TAC TTA AGC TAT AAA AAT AAT GTT TAT GAT TTG TTT TTA AAT GCT TCA AAT GAT ATT TAA ATA ATA AAG TAG ATA GAT AGC AAC CTA GGA GAA AAA TTA AAA AAA ATT GAA AAG CAT GTA TCT GAG ATT TTA AAG AGG CTT AAA AGT AAT GAA TCG TAG TAA ATG TCT ATT AAT TAG AAT GAG TAG AAC ATC TAA TAA AAT AAA GAA AAT ATT AAT GAA ATA ACC AGT AGC AAT TAA TTA GAA ATT TTA TTA AAT TAA ATT TAT AAG TAA GAA AAG ATC AGT ATT TAG TTT AAT GAA GAA TTA CTT AAT CAA GAA GTC AAT ATG GTA AAT TAA ATT GTG AGT GAG ATG AAT TTA AAT AAA ATT ATT GGG CTA TAA AAT GTG TAT GTT CAT CCG TAT GGG TCA GTT GTT AGT GGG TTT GGT TAG AAT GAT AGT GAC ATT GAT ATA AGC ATA AAT ACA GAT TGC TAT TTA GAT GAA AGA GTA TTT CTT TCT CTT ATT TAT GAT TTC ATG AAA AAT TAT TTG CAT AAA TAT AAA ATC AAA TAT TAA AAA CTT GAA TTA AAA TTA GAT GCG CGT ATT CCT TTA ATA ACT CTT GTT AAA CAG AAA GAT AAT GTT AAT TTG AAA AGT AAT ACA GTT TCA ATA GAC ATA TGT ATA AAT AAT CTA CTA GGA TGC GCA AAT TCA AAA ATG CTA AAA GTT ATA TCT TAG ATT CAT CCC TTA GTA AAG TAG CTA GGA ATA ATC ATT AAA TAT TGG GCG AAG TAG AAT GGT CTT ATA AGC AAA AAA ACT CTT AGT TCA TAT GCA TTT ATC CTC ATA ATG ATC TGC TTT TTA TAG AGA AAG AAG CTA ATT GAT CCT TAT TTT TAA GAG AAA GTT TAA AAA AGA TAA AGT GAT CCA AAA TAT TCT ACT TTG ATT AAG AGG ACA AAG GAA ACT GAT TAG GAA TTT TAA ACA AAC CTT TAT TAT GTG CAA GAT CCC TCG CAT TTA CAG AAA TCT CTA AAA AAG TAT AAA GAA AAC AAT CCA AAC TAA AAA ACT TTA TTA GAC ATG AAT CTT GCA AGC TTA TTC AGT GAG TTT ATT GAA TAT TAC TCA GAC ACC ACT GAT GAG AAT AGA AGA TAT ATA GAT ATT ATG AAT AAT TAT ATA GTA AAA TCA TAT AAT AAA AAT TTA TTC TTT TAT ATT ATT GAC CCA TTT GAT AAT TAT CAT AAC CCA GGA GAA AGA AGC AGA GTA GAG AAT ATA GAT GAT AAC ATA TTT ATA AAT AGA TTT AGG TTT GCT AAG TAA AAA TTG CAA GAC AAA CAA TAT TCG CAA ATA TTT GAA TTA AAA TTT CAA TGA
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Identifiers and Description
Gene Ontology Annotations 
Domains
Gene Expression Profile
Signal Peptide
Homologs (v.2006 protein sequences)
General Information 
Associated Literature 
Sequences
