Identifiers and Description
Gene Model Identifier
TTHERM_00773790Standard Name
RAD50 (Homolog of budding yeast Rad50)Aliases
PreTt04470 | 128.m00148 | 3676.m00073Description
RAD50 DNA repair protein RAD50 putative; Required for the formation and repair of meiotic double-strand breaksGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- membrane (IEA) | GO:0016020
- chromosome (IEA) | GO:0005694
Molecular Function
- ATP binding (IEA) | GO:0005524
Biological Process
- meiosis I (ISA) | GO:0007127 | Ref:18522989
Domains
- ( TIGR00606 ) rad50
- ( PF01576 ) Myosin tail
- ( PF02370 ) M protein repeat
- ( PF04702 ) Vicilin N terminal region
- ( PF00038 ) Intermediate filament protein
- ( PF02463 ) RecF/RecN/SMC N terminal domain
- ( PF08946 ) Osmosensory transporter coiled coil
- ( PF00005 ) ABC transporter, ATP-binding protein
- ( PF06696 ) Streptococcal surface antigen repeat
- ( TIGR02169 ) chromosome segregation protein SMC
- ( TIGR03185 ) DNA sulfur modification protein DndD
- ( PF02609 ) exodeoxyribonuclease VII, small subunit
- ( TIGR00611 ) DNA replication and repair protein
- ( TIGR01166 ) cobalt ABC transporter, ATP-binding protein
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.6%
TetraMine Data
TTHERM_00773790
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17705.1 9.997093137033517e-262 hypothetical protein (1304 aa)
Oxytricha Contig17805.0.g2 2.9989272749380808e-50 AAA domain
SGD YNL250W 1.000499495426459e-47 RAD50 Subunit of MRX complex,
with Mre11p and Xrs2p, involve
d in processing double-strand
DNA breaks in vegetative cells
, initiation of meiotic DSBs,
telomere maintenance, and nonh
omologous end joining
DictyBase DDB_G0292786 6.002397656030775e-43 rad50 on chromosome: 6 positio
n 2029933 to 2034102
WormBase WBGene00004296 6.99697739292434e-35 locus:rad-50 DNA repair prot
ein rad-50 status:Confirmed
UniProt:O44199 protein_id:
CAB01581.1
Stentor Coeruleus SteCoe_18411 4.248354255291589e-18
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00773790(coding)
ATGTCTTACTTAAAAAAGCTAGGAATTTACGGAATCAGAAGTTATGGGGATTAAAACAGT
GAAAAGTATGAAGAAATAGCCTTCTTTAAACCTTTAACTCTGATTTTAGGTAACAACGGA
GCTGGCAAGTCAACTATAATAGAATGCTTAAAACTAATCACTACTGGTTCTTTTCCTCCA
AACTCTGACAAAGGAAAAACATTTATTAAGGATCCAAGATTGATGGGTTCAAATGAGAGT
TAGGGGTCAATTTCGTTAATTTTCAAGGCTATTAATCAAAAATAAATATTAGTTAGAAGA
CTATTCTAGGTAAAAAAAGAAAAGAGTGGAAAATTTACATTTGATTCGAAAGATGCTACG
ATTAAAGTTAGAGATAAGAATACAGGAAAGGATATCTCTGTAGATCATAAATGTTTAGAA
ATTGAAAAATAAGTCCCACAGTTATTAGGTGTTAGTAAAGCTGTTTTTGAAAATGTTATC
TTTTGTCACTAAGATGAAAGTCTTTGGCCATTTGGTGACAGTGCAACATTAAAAAGTATT
TTCGATGAACTTTTCGATACTAAACAATTCACAAAACTTTAAGAAACTTTGCATAAGTAA
CAGAAAGAAATTAAAAAAGAAGCTTCAGAAACGAAAATTAATTTGTAGCACTACAAGCAA
AGATATGATGAGGCTGTTTCTCAGAAATAGTTGATTGCAAAAGAAGCAGAAGATTTACTC
TAAGCTACTGTAGATCTTGAAAAAATGAGAAACGAATATAATTTGTTTAATAAAGGAATT
GAAGATGAAGAAACAGTCAGAATAAGGATAGAAAACTTAAATAAAGATATTTGCAATTGT
AATTGGAACAAAAATGAAATGGAAAAATAGTAGAAATAAATATTAAGTAGCTGCAGTAGA
CACTATTTTTTAGGTGAAGATATTGATACACTAAAAAAAATATAAGATCATCTTAAGAAA
GAAAACTAAGATTTGAAGATAAAGAAAGAGGAAATTGAAGAAAGTATTGAAACAGAAAAA
AGGGATTTAGATAAGTTGAAGTATGAAATAGAAAATTTGAAATCATCAGATAAGAATACT
AAATAAGTTCATTAAGATCTCAAAAACATTAAATAAAAATTAAATGAAATTATGCATAAA
TCTATTGATTCTGATGAGATTATGCTGAAAGAGGCTAACCAATATAAAGATTAAATAGAA
TCAGAATATAAAACATTATCATTTTCTTTAAAAAACTCTGTACAGGAATATCAAGATACT
ATTCACTAAACATAGCAAAATTTACAAAAACTTTAAGTAAGGTAAGCTGAACTTAAAGAA
AAAAAAAAGCACTCTCAAAAGAGAATTGAATAGCTTTAAGAAGAAATTGGAAAACTAAAA
TCTTCAAACACTCAAAAAAATTTAGAAGAGTCAATTTAATTATTGGAGGTGTCTAAAAAA
AATAGTGAACAATATAACTTAAAGATATAAGAATACTAAGACTAAATAGATAATATTAGA
TAGCAAAATTCTGGATTAGCAAAATAAATTGAAATTATTAACTCATAGTCTAAAATGCAA
AGTAAATATTTAGAGCTAAAATAAATGACAAGCTAGTTTGATGAAATAAATAAAACTATG
GAGGTTTAGCAAAAAGAATACGAATAATATTAAATTTCACAAGACGAACATTTGAGTGAG
CAAAGAAAGTAATGCATGGGTGAAATAAGTAGCTTAAAGTAGCAAAAATCGAAACTTGAG
TCAGAAATTTCGAAATTAGAAGGTAGAATAGAGCTAAATGAAGACATAGAAACAGCTTTT
GAATTAAAACTAAATCAAATAACTTAAACTTTTAAAGAAAGTAATTTACTCGATATTATT
GCTTAAGACAATAATGCAGATTTTGATACAAAATACTAATCAATTAAAGAAGAAATAGAA
GAATTAAAAAATAGCATTATTGAAAAGCAAACTTGCTTATTAATTGATAAATAAGTTCTA
AATTATTGCACTGAGAAGAAAAAGTGCAAATTTTGTAAAAGTGATGTTAATGAAGATAAT
ATATCCAAAATAACTAAATCCTAAGAAGATAGATCAAGAAAAGCAGAAAAAGATATACAA
GAGCGTATTGCCCTTAAAGAATAAAAAATATTTGAGAAAAAATAATTGAAAAAACTCAAG
GAATAGTACGTTTAGTATAATGAATTGAGGGCTAAATAAAAAAAGAATAACTCTGAGATT
AAAGAGATATAAATTCAGGTTAAAGAACTACAAGAGCAATTATAAAATTTAGTCAATTAA
CTTATTAATAAAGAAGCTCAATTAGCTAAACTAGAAAAAGCACATACTATTTAAAGTGAA
ATCATTAAAACATAAAGATAAATTTATAACTTGAAGAATAAAATTCAGAAATTTTAAGTT
GAAAATCCTGAATTACTAAATATTGATAATTAAAATATTATACCACCAGAAAAAGTTGAA
GAAATCCATAAAAACTATAAGCAAAATAACTAAAGGTTAGAGTCTTTGAACAGCCTGCTT
ATTTAAGAAAATAACAAAAAAGCGAACTCTAATGCTAGTTTTCAATAAGCAGAAGTGTTA
AGAAAAAACTGCTAAAATAAGCTAAAAGAAGAACAAGAGCAAATTCAAAGAAACACAAAA
GATATTAAAGATTATGAATAATAAAATTAAACATCTCTCACTGAACTATAAAATATTGAA
AAAGATATAGAATCATAAAACAAATTATTATAAGAGCTTAAAAAAAATGTAAGTGAATAA
ACACAAGAGCTTTAGAAAGTTTAATAAACTTACGACTAATCCAAAATACTGATTGGCGAA
TACCTTCCTAAATACGAAAAGACCTATACAGAATATAAAGAACTTAAGCAAGCCAAAGGA
AAGTAAAAAAGTAAATTATAAGAAAATTAAATCGCTTAATTAGAAAAGGAGTATGCTATC
AAGGAAAAATCGAAATAATAAAATGAAGAAGAACTAGTAAAGATTATAGAGTAACTGAAA
GAACAGACTGAAGAATTTGACAATCTTACAAAAGGTATCTAATATCTAGAACTTGGTGTT
TCTATATCTTAGGTGGAAAAAGAGTTAGCTCAAAATGAACAACTTCTCAAAGAATAGTAA
GCAATTTTAGAGAAAATCTAACAATAAACGAGAGCAGGATATGATAAAATACAAAAAATA
AAAGCTTTTGAAGAAACCTGCAAATATAGAAAATAAGCTTTAGAAAAAAATTATGCAGAG
GCAATAGCCAGATATGATCAGGCTGAAGAAAGATATTGTAGAGCACTAGTTGAGTTAGAA
GTAAAAAATGGATTGCTAAAAGACATCTAAGAATACTTAGAGGAGCTTGATAAAACACTA
ATTAACTATCATAAGGATAAGATGGAATAAATTAATAAATGCATTGCAGATACTTGGAAA
AAAATTTATTAAGGCTAAGATATTGTTAAAGTTGAGATCAAAGCAGAAGAAGCAGAAGGA
AGAGGCAAAAAAATATATAACTATAGAATTGTTATGTTTATCTACGACGAAAAGGATAAA
GATCTCAAAGAGATAGATATGAAAGGCAGATGTAGTGCTGGTTAAAAAGTTCTTGCTTCA
ATCATTATTAGGTTAGCATTAGCTGAAGCATTTACTATGAATTGTGGTATCCTTGCACTT
GATGAGCCTACAACAAATCTTGATAAGCTTCATGCCTAAAAATTGGGAGAGCAACTATGT
GAACTTATAGAGTCCAGAAAAGGATAATCGTCTTTCCAACTTATCATAATTTCACATGAT
AAAGATTTTATTCATTTAATGTAGCAGAGATAACATTGTAGTGACTTCTACTACGTATAT
AAGGAAAATGGATGTTCTCTAATTGAAAGAAGAACTTATAAAAATGCTTTGATGAACAAG
TAAACAGATTGA>TTHERM_00773790(protein)
MSYLKKLGIYGIRSYGDQNSEKYEEIAFFKPLTLILGNNGAGKSTIIECLKLITTGSFPP
NSDKGKTFIKDPRLMGSNESQGSISLIFKAINQKQILVRRLFQVKKEKSGKFTFDSKDAT
IKVRDKNTGKDISVDHKCLEIEKQVPQLLGVSKAVFENVIFCHQDESLWPFGDSATLKSI
FDELFDTKQFTKLQETLHKQQKEIKKEASETKINLQHYKQRYDEAVSQKQLIAKEAEDLL
QATVDLEKMRNEYNLFNKGIEDEETVRIRIENLNKDICNCNWNKNEMEKQQKQILSSCSR
HYFLGEDIDTLKKIQDHLKKENQDLKIKKEEIEESIETEKRDLDKLKYEIENLKSSDKNT
KQVHQDLKNIKQKLNEIMHKSIDSDEIMLKEANQYKDQIESEYKTLSFSLKNSVQEYQDT
IHQTQQNLQKLQVRQAELKEKKKHSQKRIEQLQEEIGKLKSSNTQKNLEESIQLLEVSKK
NSEQYNLKIQEYQDQIDNIRQQNSGLAKQIEIINSQSKMQSKYLELKQMTSQFDEINKTM
EVQQKEYEQYQISQDEHLSEQRKQCMGEISSLKQQKSKLESEISKLEGRIELNEDIETAF
ELKLNQITQTFKESNLLDIIAQDNNADFDTKYQSIKEEIEELKNSIIEKQTCLLIDKQVL
NYCTEKKKCKFCKSDVNEDNISKITKSQEDRSRKAEKDIQERIALKEQKIFEKKQLKKLK
EQYVQYNELRAKQKKNNSEIKEIQIQVKELQEQLQNLVNQLINKEAQLAKLEKAHTIQSE
IIKTQRQIYNLKNKIQKFQVENPELLNIDNQNIIPPEKVEEIHKNYKQNNQRLESLNSLL
IQENNKKANSNASFQQAEVLRKNCQNKLKEEQEQIQRNTKDIKDYEQQNQTSLTELQNIE
KDIESQNKLLQELKKNVSEQTQELQKVQQTYDQSKILIGEYLPKYEKTYTEYKELKQAKG
KQKSKLQENQIAQLEKEYAIKEKSKQQNEEELVKIIEQLKEQTEEFDNLTKGIQYLELGV
SISQVEKELAQNEQLLKEQQAILEKIQQQTRAGYDKIQKIKAFEETCKYRKQALEKNYAE
AIARYDQAEERYCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWK
KIYQGQDIVKVEIKAEEAEGRGKKIYNYRIVMFIYDEKDKDLKEIDMKGRCSAGQKVLAS
IIIRLALAEAFTMNCGILALDEPTTNLDKLHAQKLGEQLCELIESRKGQSSFQLIIISHD
KDFIHLMQQRQHCSDFYYVYKENGCSLIERRTYKNALMNKQTD>TTHERM_00773790(gene)
ATGTCTTACTTAAAAAAGCTAGGAATTTACGGAATCAGAAGTTATGGGGATTAAAACAGT
GAAAAGTATGAAGAAATAGCCTTCTTTAAACCTTTAACTCTGATTTTAGGTAACAACGGA
GCTGGCAAGTCAGTAATATTTTTATTTTTTAATAATTTAACAAAGTTAACTTAAACTTAT
TTAGACTATAATAGAATGCTTAAAACTAATCACTACTGGTTCTTTTCCTCCAAACTCTGA
CAAAGGAAAAACATTTATTAAGGATCCAAGATTGATGGGTTCAAATGAGAGTTAGGGGTC
AATTTCGTTAATTTTCAAGGCTATTAATCAAAAATAAATATTAGTTAGAAGACTATTCTA
GGTAATTTTAAATAATAATTCTTAATCAACAACTAAAATAAGTATTTTATACAAGGTAAA
AAAAGAAAAGAGTGGAAAATTTACATTTGATTCGAAAGATGCTACGATTAAAGTTAGAGA
TAAGAATACAGGAAAGGATATCTCTGTAGATCATAAAGTATAAATAAAATATATAATTTT
GACTTATCTTATAAATAATTTTATTTATTTTTAAGTGTTTAGAAATTGAAAAATAAGTCC
CACAGTTATTAGGTGTTAGTAAAGCTGTTTTTGAAAATGTTATCTTTTGTCACTAAGATG
AAAGTCTTTGGCCATTTGGTGACAGTGCAACATTAAAAAGTATTTTCGATGAACTTTTCG
ATACTAAACAGTAATACAAATAAAAATAATTAATTTTTTTTTCTTTAATATTTCACAATC
TTAGAATATACTTAATTAAATAATAAAAAGATTCACAAAACTTTAAGAAACTTTGCATAA
GTAACAGAAAGAAATTAAAAAAGAAGCTTCAGAAACGAAAATTAATTTGTAGCACTACAA
GCAAAGATATGATGAGGCTGTTTCTCAGAAATAGTTGATTGCAAAAGAAGCAGAAGATTT
ACTCTAAGCTACTGTAGATCTTGAAAAAATGAGAAACGAATATAATTTGTTTAATGTAAT
TTATTTAAAATTTTAAAATAAGTAAAAAAGCTTTATTTTTGATTTTAGAAAGGAATTGAA
GATGAAGAAACAGTCAGAATAAGGATAGAAAACTTAAATAAAGATATTTGCAATTGTAAT
TGGAACAAAAATGAAATGGAAAAATAGTAGAAATAAATATTAAGTAGCTGCAGTAGACAC
TATTTTTTAGGTGAAGATATTGATACACTAAAAAAAATATAAGATCATCTTAAGAAAGAA
AACTAAGATTTGAAGATAAAGAAAGAGGAAATTGAAGAAAGTATTGAAACAGAAAAAAGG
GATTTAGATAAGTTGAAGTATGAAATAGAAAATTTGAAATCATCAGATAAGAATACTAAA
TAAGTTCATTAAGATCTCAAAAACATTAAATAAAAATTAAATGAAATTATGCATAAATCT
ATTGATTCTGATGAGATTATGCTGAAAGAGGCTAACCAATATAAAGATTAAATAGAATCA
GAATATAAAACATTATCATTTTCTTTAAAAAACTCTGTACAGGAATATCAAGATACTATT
CACTAAACATAGCAAAATTTACAAAAACTTTAAGTAAGGTAAGCTGAACTTAAAGAAAAA
AAAAAGCACTCTCAAAAGAGAATTGAATAGCTTTAAGAAGAAATTGGAAAACTAAAATCT
TCAAACACTCAAAAAAATTTAGAAGAGTCAATTTAATTATTGGAGGTGTCTAAAAAAAAT
AGTGAACAATATAACTTAAAGATATAAGAATACTAAGACTAAATAGATAATATTAGATAG
CAAAATTCTGGATTAGCAAAATAAATTGAAATTATTAACTCATAGTCTAAAATGCAAAGT
AAATATTTAGAGCTAAAATAAATGACAAGCTAGTTTGATGAAATAAATAAAACTATGGAG
GTTTAGCAAAAAGAATACGAATAATATTAAATTTCACAAGACGAACATTTGAGTGAGCAA
AGAAAGTAATGCATGGGTGAAATAAGTAGCTTAAAGTAGCAAAAATCGAAACTTGAGTCA
GAAATTTCGAAATTAGAAGGTAGAATAGAGCTAAATGAAGACATAGAAACAGCTTTTGAA
TTAAAACTAAATCAAATAACTTAAACTTTTAAAGAAAGTAATTTACTCGATATTATTGCT
TAAGACAATAATGCAGGTATTTAAAAAAAAAATATATAATTGTTTTCTAAAAAATAAATT
TTTTTACTATAGATTTTGATACAAAATACTAATCAATTAAAGAAGAAATAGAAGAATTAA
AAAATAGCATTATTGAAAAGCAAACTTGCTTATTAATTGATAAATAAGTTCTAAATTATT
GCACTGAGAAGAAAAAGTGCAAATTTTGTAAAAGTGATGTTAATGAAGATAATATATCCA
AAATAACTAAATCCTAAGAAGATAGATCAAGAAAAGCAGAAAAAGATATACAAGAGCGTA
TTGCCCTTAAAGAATAAAAAATATTTGAGAAAAAATAATTGAAAAAACTCAAGGAATAGT
ACGTTTAGTATAATGAATTGAGGGCTAAATAAAAAAAGAATAACTCTGAGATTAAAGAGA
TATAAATTCAGGTTAAAGAACTACAAGAGCAATTATAAAATTTAGTCAATTAACTTATTA
ATAAAGAAGCTCAATTAGCTAAACTAGAAAAAGCACATACTATTTAAAGTGAAATCATTA
AAACATAAAGATAAATTTATAACTTGAAGAATAAAATTCAGAAATTTTAAGTTGAAAATC
CTGAATTACTAAATATTGATAATTAAAATATTATACCACCAGAAAAAGTTGAAGAAATCC
ATAAAAACTATAAGCAAAATAACTAAAGGTTAGAGTCTTTGAACAGCCTGCTTATTTAAG
AAAATGTAATTTAATTATTATTTAATTTTAATTAAATATTATTAATTTATAGAACAAAAA
AGCGAACTCTAATGCTAGTTTTCAATAAGCAGAAGTGTTAAGAAAAAACTGCTAAAATAA
GCTAAAAGAAGAACAAGAGCAAATTCAAAGAAACACAAAAGATATTAAAGATTATGAATA
ATAAAATTAAACATCTCTCACTGAACTATAAAATATTGAAAAAGATATAGAATCATAAAA
CAAATTATTATAAGAGCTTAAAAAAAATGTAAGTGAATAAACACAAGAGCTTTAGAAAGT
TTAATAAACTTACGACTAATCCAAAATACTGATTGGCGAATACCTTCCTAAATACGAAAA
GACCTATACAGAATATAAAGAACTTAAGCAAGCCAAAGGAAAGTAAAAAAGTAAATTATA
AGAAAATTAAATCGCTTAATTAGAAAAGGAGTATGCTATCAAGGAAAAATCGAAATAATA
AAATGAAGAAGAACTAGTAAAGATTATAGAGTAACTGAAAGAACAGACTGAAGAATTTGA
CAATCTTACAAAAGGTATCTAATATCTAGAACTTGGTGTTTCTATATCTTAGGTGGAAAA
AGAGTTAGCTCAAAATGAACAACTTCTCAAAGAATAGTAAGCAATTTTAGAGAAAATCTA
ACAATAAACGAGAGCAGGATATGATAAAATACAAAAAATAAAAGCTTTTGAAGAAACCTG
CAAATATAGAAAATAAGCTTTAGAAAAAAATTATGTAAAACTTTTAAATTTTTAAATTAA
TAAAAAATTAAAATTATATATTAGGCAGAGGCAATAGCCAGATATGATCAGGCTGAAGAA
AGATATTGTAGAGCACTAGTTGAGTTAGAAGTAAAAAATGGATTGCTAAAAGACATCTAA
GAATACTTAGAGGAGCTTGATAAAACACTAATTAACTATCATAAGGATAAGATGGAATAA
ATTAATAAATGCATTGCAGATACTTGGAAAGTAAAAATACTAAAAGCAAATAATTTATTA
AATTTATTTTATTTTAGAAAATTTATTAAGGCTAAGATATTGTTAAAGTTGAGATCAAAG
CAGAAGAAGCAGAAGGAAGAGGCAAAAAAATATATAACTATAGAATTGTTATGTTTATCT
ACGAGTAAATAAATAAATAACTTACTTATTTACTTTCTTTCTTTATTCCTAATTTTTAAT
TTATAAAATATTTTAAAAAGCGAAAAGGATAAAGATCTCAAAGAGATAGATATGAAAGGC
AGATGTAGTGCTGGTTAAAAAGTTCTTGCTTCAATCATTATTAGGTTAGCATTAGCTGAA
GCATTTACTATGAATTGTGGTATCCTTGCACTTGATGAGCCTACAACAAATCTTGATAAG
CTTCATGCCTAAAGTAAATAATATTTTCGTTAACATTCTAAACTTATAAAATATTTTTTA
GAATTGGGAGAGCAACTATGTGAACTTATAGAGTCCAGAAAAGGATAATCGTCTTTCCAA
CTTATCATAATTTCACATGATAAAGATTTTATTCATTTAATGTAGCAGAGATAACATTGT
AGTGACTTCTACTACGTATATAAGGTAAATTTCATAATTTTATAATAAAACAAAATATTG
AATGATATTCTAATAAATATAAAATAAGGAAAATGGATGTTCTCTAATTGAAAGAAGAAC
TTATAAAAATGCTTTGATGAACAAGTAAACAGATTGA