Identifiers and Description
Gene Model Identifier
TTHERM_00437617Standard Name
RAD27 (5' to 3' exonuclease)Aliases
3708.m00952Description
flap endonuclease-1; flap endonuclease-1 PIN domain proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- nuclease activity (IEA) | GO:0004518
Biological Process
- DNA repair (IEA) | GO:0006281
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.5%
TetraMine Data
TTHERM_00437617
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_12460.1 9.997093137033517e-262 flap endonuclease-1 (387 aa)
Oxytricha Contig12777.0.g42 9.996261361959507e-120 XPG I-region
WormBase WBGene00000794 5.998625834015334e-112 locus:crn-1 Flap endonucleas
e 1 status:Confirmed UniPr
ot:Q9N3T2 protein_id:CCD7255
3.1
SGD YKL113C 2.000234809436283e-103 RAD27 5 to 3 exonuclease, 5 fl
ap endonuclease, required for
Okazaki fragment processing an
d maturation as well as for lo
ng-patch base-excision repair;
member of the S. pombe RAD2/F
EN1 family
DictyBase DDB_G0284987 1.9998944264638884e-101 repG on chromosome: 4 position
2762877 to 2764154
Stentor Coeruleus SteCoe_27474 1.5400882849875202e-51
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00437617(protein)
MGIHKLMDLLKEKAPGCIKTSDLKFYAGRMIACDASMAMYQFLATTSSASDFQIQNLTDK
DGNKTGHLVGLLNRTVMLIENGLKPVWVFDGKPPQFKSGELARRQKAKDEAAEKQKTAIE
TGDMQEALKQEQRNLHITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATV
TEDMDALTFATPFLLRNLNSKKEPITEINYEKMLQELKLSHNEFVDLCILCGCDYLGRIE
GVGPVNAFKLITEHKSLEKVLEHMEEVNKQSTKKQKYTVPSSYDYVSARDLFINPEVTDP
ETIQLEWKKPDVEELKKFLVEEKGFSEQRVTSQMEKVLNAKEHKGSQTRLNDFFKVQPKD
TSSTSKASKKPTNTKSANKKGGKK>TTHERM_00437617(coding)
ATGGGAATTCATAAATTGATGGATCTATTAAAGGAGAAAGCTCCTGGATGCATTAAGACA
TCAGATCTAAAATTCTATGCTGGCCGTATGATTGCATGTGATGCCTCTATGGCAATGTAT
TAATTTTTAGCAACTACAAGCAGTGCTTCTGATTTCTAGATATAAAATTTAACAGATAAA
GATGGCAATAAAACAGGACATTTAGTTGGTTTACTTAATAGAACTGTAATGCTTATCGAA
AATGGTCTCAAGCCAGTTTGGGTTTTCGATGGTAAACCTCCTTAATTCAAGAGTGGTGAA
CTTGCAAGAAGACAAAAAGCAAAAGACGAAGCTGCTGAAAAGTAAAAAACTGCTATAGAA
ACTGGTGATATGTAAGAAGCTTTAAAGCAAGAACAACGTAATTTGCATATTACAAAAGAA
ATGAAAGCTGATGCAATAAAATTACTTTAATTGGTTGGTGTTCCAGTGATTTTAGCCCCA
TGTGAAGCAGAAGCATAATGCGCTGCTTTGGCAAAAGCTAAGAAAGTTTTTGCTACTGTT
ACTGAAGATATGGATGCTCTCACTTTTGCTACACCTTTTCTCTTGAGAAATCTCAATAGT
AAAAAGGAACCAATTACAGAAATAAACTACGAAAAGATGCTATAAGAATTAAAGTTATCT
CATAATGAATTTGTTGATTTGTGTATCTTATGTGGATGCGATTATTTAGGACGTATAGAA
GGTGTTGGCCCAGTTAATGCTTTCAAACTTATAACAGAGCACAAATCTCTAGAGAAAGTT
CTTGAACACATGGAAGAAGTTAACAAACAAAGCACTAAAAAATAAAAATATACAGTACCA
AGTTCTTATGATTATGTATCAGCAAGAGATCTTTTTATTAATCCTGAAGTTACTGATCCA
GAGACTATTTAGCTTGAATGGAAGAAACCAGATGTAGAAGAATTAAAGAAATTTTTAGTA
GAAGAAAAAGGATTTAGCGAGTAAAGAGTTACCAGTTAGATGGAAAAAGTTTTAAATGCT
AAAGAACATAAAGGTTCTTAAACCAGACTGAATGATTTCTTTAAAGTATAGCCTAAAGAT
ACATCATCAACAAGTAAGGCATCTAAAAAGCCAACAAATACTAAAAGTGCAAATAAAAAG
GGAGGAAAAAAATGA>TTHERM_00437617(gene)
ATGGGAATTCATAAATTGATGGATCTATTAAAGGAGAAAGCTCCTGGATGCATTAAGACA
TCAGATCTAAAATTCTATGCTGGCCGTATGATTGCATGTGATGCCTCTATGGTAATCAAT
AACTAATTTAAGCATAATCTAATTATTTTATTCATATTTACTATAAATAGGCAATGTATT
AATTTTTAGCAACTACAAGCAGTGCTTCTGATTTCTAGATATAAAATTTAACAGATAAAG
ATGGCAATAAAACAGGACATTTAGTTGGTTTACTTAATAGAACTGTAATGCTTATCGAAA
ATGGTCTCAAGCCAGTTTGGGTTTTCGATGGTAAACCTCCTTAATTCAAGAGTGGTGAAG
TAATAAATAAATAAACAAATTCATTCAACATTTTTTAAAGATTGAACTTAATGAAATATT
TAAAAATATTTTTTATTTATAAGCTTGCAAGAAGACAAAAAGCAAAAGACGAAGCTGCTG
AAAAGTAAAAAACTGCTATAGAAACTGGTGATATGTAAGAAGCTTTAAAGCAAGAACAAC
GTAATTTGCATATTACAAAAGAAATGAAAGCTGATGCAATAAAATTACTTTAATTGGTTG
GTGTTCCAGTGATTTTAGCCCCATGTGAAGCAGAAGCATAATGCGCTGCTTTGGCAAAAG
CTAAGAAAGTTTTTGCTACTGTTACTGAAGATATGGATGCTCTCACTTTTGCTACACCTT
TTCTCTTGAGAAATCTCAATAGTAAAAAGGAACCAATTACAGAAATAAACTACGAAAAGA
TGCTATAAGAATTAAAGTTATCTCATAATGAATTTGTTGATTTGTGTATCTTATGTGGAT
GCGATTATTTAGGACGTATAGAAGGTGTTGGCCCAGTTAATGCTTTCAAACTTATAACAG
AGCACAAATCTCTAGAGAAAGTTCTTGAACACATGGAAGAAGTTAACAAACAAAGCACTA
AAAAATAAAAATATACAGTACCAAGTTCTTATGATTATGTATCAGCAAGAGATCTTTTTA
TTAATCCTGAAGTTACTGATCCAGAGACTATTTAGGTAAAATTGATCTTTTTTATGTAAA
TATTTATATATAAACTGTGTTTATTTATAAAAAGCTTGAATGGAAGAAACCAGATGTAGA
AGAATTAAAGAAATTTTTAGTAGAAGAAAAAGGATTTAGCGAGTAAAGAGTTACCAGTTA
GATGGAAAAAGTTTTAGTAAAATTATATTTTTTAAATTAAATAAAAATTTATTTTAAATT
AATCATAGAATGCTAAAGAACATAAAGGTTCTTAAACCAGACTGAATGATTTCTTTAAAG
TATAGCCTAAAGATACATCATCAACAAGTAAGGCATCTAAAAAGCCAACAAATACTAAAA
GTGCAAATAAAAAGGGAGGAAAAAAATGA