Identifiers and Description
Gene Model Identifier
TTHERM_00013290Standard Name
RAD23 (RADiation sensitive 23)Aliases
PreTt11835 | 1.m00883Description
RAD23 UV excision repair RAD23-like protein putative; UBA/TS-N domain containing protein; recognizes DNA damage in nucleotide excision repair; homolog of yeast RAD23Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- damaged DNA binding (IEA) | GO:0003684
Biological Process
- proteasome-mediated ubiquitin-dependent protein catabolic process (IEA) | GO:0043161
- nucleotide-excision repair (IEA) | GO:0006289
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.4%
TetraMine Data
TTHERM_00013290
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_02723.1 9.997093137033517e-262 UBA/TS-N domain-containing pro
tein (375 aa)
Oxytricha Contig21398.0.g83 5.0019039340728934e-39 Ubiquitin family
WormBase WBGene00013924 7.001072473260973e-36 locus:rad-23 status:Confirme
d UniProt:Q23451 protein_i
d:CAA93780.2
DictyBase DDB_G0286357 7.002785992501305e-33 rcbA on chromosome: 4 position
4412389 to 4414128
SGD YEL037C 4.000352986427571e-28 RAD23 Protein with ubiquitin-l
ike N terminus, subunit of Nuc
lear Excision Repair Factor 2
(NEF2) with Rad4p that binds d
amaged DNA; enhances protein d
eglycosylation activity of Png
1p; also involved, with Rad4p,
in ubiquitylated protein turn
over
Stentor Coeruleus SteCoe_24399 2.8625185805493937e-20
General Information
No Data fetched for General Information
Associated Literature
Sequences
>TTHERM_00013290(coding)
ATGAAGATCAACATTAAGACTTTAAAGGGCACTGATTTTTTTGATGTTAACCTTGAAGAA
ACTGCTACAGTTGCTGAATTGAAGGAGAAGATTGCTACTGAAAAGTAAAAGGAAAAAGAT
ACTATTAAGTTAGTTCATAAAGGTAAATAATTGACCGAAGACTCTAAGACTCTTGGCGAA
CTTGGTATTAAAGATAATGATTTTGTTATTCTCATGTTCTTTTAAAAGAAAGCAGAAAAA
GAAGATGCTCCATAATAAGCTTAATCTGATACCACTTCTACTACCTCCGCTGCCTCAACA
ACTGCTACTAACCCCACTACTGTTCCTAAGCCTGCTGTTTCCTAACCCGCTACAACATAA
TAAACAGGAAGTTAAGGAACAGGTAGTGATCTCCTTTAAGGTCCTGAATTGGAAGCCAAA
ATTAAAGAAATTGAATCAATGGGTTTTGAAAGACCTAAGGTTCTTTAAGCTTTGAAGGCC
GCTTATTACAATCCTGAAAGAGCAGTTGATTATTTACTCAGTGGTAATATTCCTAAAGAA
CCTAGTTAATAATAGAGTCCTTTACAAGGCTTACAAGGTCCTGGTGTTGAATAATTAGCT
TAATTAGCTTAAAATCCTCAATTCCAACACATTGCTTAAGCTATTCGTTAAAACCCTGCT
CTTCTCCAACCTGTCATGTAATAATTAGCTTAAACTAACCCTGATGTTGCCAGACTTTTA
CAATAAAACCCTCAAGCTTTCTTGCAACTCCTCCTTGCTGCCTCTGAAAACGAAGGTGGA
TAAACCTTACCTCCAAATGCCATCCAAGTCACTCCTGAAGAAAAAGCTGATATTGATGAC
ATTATTTCTATGGGTTTTGATAAAAATGACGCCTTAGAAGCATATATTACCTGCGACAAG
AACAAAGAATTAGCAATTAACTATCTTTTCGAAGCAAGGGAAAGCGGTACTCTTCTTTCT
GAACACATCCAAAAGGAAGAATTAGAAGCTGCATAATAATAATCATAAAACTAAAATTAA
TAACAATAAGGTAATAACCCAAATCAATAATAATAATAAGGTGGATAAGGTGAAGGTGGT
GATAATGATGATGAAGATGACGATGATTTTATGTATTAATGA>TTHERM_00013290(protein)
MKINIKTLKGTDFFDVNLEETATVAELKEKIATEKQKEKDTIKLVHKGKQLTEDSKTLGE
LGIKDNDFVILMFFQKKAEKEDAPQQAQSDTTSTTSAASTTATNPTTVPKPAVSQPATTQ
QTGSQGTGSDLLQGPELEAKIKEIESMGFERPKVLQALKAAYYNPERAVDYLLSGNIPKE
PSQQQSPLQGLQGPGVEQLAQLAQNPQFQHIAQAIRQNPALLQPVMQQLAQTNPDVARLL
QQNPQAFLQLLLAASENEGGQTLPPNAIQVTPEEKADIDDIISMGFDKNDALEAYITCDK
NKELAINYLFEARESGTLLSEHIQKEELEAAQQQSQNQNQQQQGNNPNQQQQQGGQGEGG
DNDDEDDDDFMYQ>TTHERM_00013290(gene)
ATGAAGATCAACATTAAGACTTTAAAGGGCACTGATTTTTTTGATGTTAACCTTGAAGAA
ACTGCTACAGTAAATTTATTAAAATGTTTTGTTTTAGGAGAGCTCGAATTCTTGTTGACA
TTTTAAGAATTAGCTAGATAAATACTTGTTTTCAACATATTTTATAATCTTGTTAGGTTG
CTGAATTGAAGGAGAAGATTGCTACTGAAAAGTAAAAGGAAAAAGATACTATTAAGTTAG
TTCATAAAGGTAAATAATTGACCGAAGACTCTAAGACTCTTGGCGAACTTGGTATTAAAG
ATAATGATTTTGTTATTCTCATGTTCTTTTAAAAGGTAATATTATCTTAGTTTTAAGATT
TCTTCAAAATGCGGCTATCTATTTATTTCTCTTTCTATGTGTGCTTTCTTTTAATCATGA
TTAAATTAGAAAAATTCTTCAAAAAATGAAGTAAAATCAATATTTTCTTTGTCGAATTGT
ACACAATTTAATGTGACATGACACTGAAATCATCTTAGTGACTGTTAAGCATTTTAATAG
ATGAATAATAGATAAAGTAGCATAGAAAGCAGAGAAAATTTTATGGCTAGCATTTAATGA
AAGAAAGAAAGAAAGAATGAAATTGCAATTATAATTTAAAAAATAATAAACTAAATATAA
CATTATTATAGAAAGCAGAAAAAGAAGATGCTCCATAATAAGCTTAATCTGATACCACTT
CTACTACCTCCGCTGCCTCAACAACTGCTACTAACCCCACTACTGTTCCTAAGCCTGCTG
TTTCCTAACCCGCTACAACATAATAAACAGGAAGTTAAGGAACAGGTAGTGATCTCCTTT
AAGGTCCTGAATTGGAAGCCAAAATTAAAGAAATTGAATCAATGGGTTTTGAAAGACCTA
AGGTTCTTTAAGCTTTGAAGGCCGCTTATTACAATCCTGAAAGAGCAGTTGATTATTTAC
TCAGTGGTAATATTCCTAAAGAACCTAGTTAATAATAGAGTCCTTTACAAGGCTTACAAG
GTCCTGGTGTTGAATAATTAGCTTAATTAGCTTAAAATCCTCAATTCCAACACATTGCTT
AAGCTATTCGTTAAAACCCTGCTCTTCTCCAACCTGTCATGTAATAATTAGCTTAAACTA
ACCCTGATGTTGCCAGACTTTTACAATAAAACCCTCAAGCTTTCTTGCAACTCCTCCTTG
CTGCCTCTGAAAACGAAGGTGGATAAAGTAATAATTTTAAATTGTTAATTTTTCATGGAC
TTTAAATGCTAAAATAATTGACAAAAGAAAGTCTTTTACTTTTCCATTAAAGACAAAAAG
AATATAAATTCTTGTATCTGTCTTTCTTTCTTTCTATCTATTTATCTTTCTATTGATTGA
TTTAAATAATCTGATCTGATTAAAGAAAATAGAAAAGAGCAGAATTGATTAGTTAGCATA
TCTTCTTCGTTTTTCTATTTATTTTTTAATAAAAATTAATCTTTAAAATTAATTAGCCTT
ACCTCCAAATGCCATCCAAGTCACTCCTGAAGAAAAAGCTGATATTGATGACATTATTTC
TATGGGTTTTGATAAAAATGACGCCTTAGAAGCATATATTACCTGCGACAAGAACAAAGA
ATTAGCAATTAACTATCTTTTCGAAGCAAGGGAAAGCGGTACTCTTCTTTGTAAGAAATA
TTAACTTTTTTTTTTTTAATTCAAGAAAGCAAGCAAGTTTAAAAAAGCAATTGTGTATAT
AAATAAATCATTAAATTAAAATAAGAAATAGTTGAAAAAAAAGATATTCATTCATCCATT
CACATAGTAAATATTCTAAATAAATTTTTATTTAATTAAATAGCTGAACACATCCAAAAG
GAAGAATTAGAAGCTGCATAATAATAATCATAAAACTAAAATTAATAACAATAAGGTAAT
AACCCAAATCAATAATAATAATAAGGTGGATAAGGTGAAGGTGGTGATAATGATGATGAA
GATGACGATGATTTTATGTATTAATGA