Identifiers and Description

Gene Model Identifier

TTHERM_01113100

Standard Name

RACK1 (Receptor for Activated C Kinase 1)

Aliases

PreTt01916 | 240.m00039

Description

Homolog of yeast ASC1

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00400 ) WD domain, G-beta repeat

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_01113100

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_19407.1	9.997093137033517e-262	hypothetical protein (345 aa)
Oxytricha	Contig1225.1.g107	1.99970314379378e-94	WD domain, G-beta repeat
DictyBase	DDB_G0275045	9.996373193201036e-79	gpbB on chromosome: 2 position 5266629 to 5267764
WormBase	WBGene00010556	4.001371804839974e-78	locus:rack-1 Guanine nucleot ide-binding protein subunit be ta-2-like 1 status:Confirmed UniProt:Q21215 protein_id :CAA93514.1
SGD	YMR116C	1.000296925633081e-74	ASC1 G-protein beta subunit an d guanine nucleotide dissociat ion inhibitor for Gpa2p; ortho log of RACK1 that inhibits tra nslation; core component of th e small (40S) ribosomal subuni t; represses Gcn4p in the abse nce of amino acid starvation
Stentor Coeruleus	SteCoe_13450	8.194012623990515e-40

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_01113100(coding)
ATGGCTGATAATTCATCTTTAGATATCCAAGTTGTCAAGAGAGGTATCCTCGAAGGTCAC
TCTGACTGGGTCACTTCCATCGTCGCTGGTTTCTCCCAAAAGGAAAACGAAGACTCCCCT
GTCTTGATCTCCGGTTCCAGAGATAAGACCGTCATGATCTGGAAATTGTACGAAGAAGAA
CAAAACGGTTACTTCGGTATCCCCCACAAGGCCCTCACTGGTCACAACCACTTCGTCTCC
GACTTGGCCCTCTCTCAAGAAAACTGCTTCGCCATCTCCTCTTCTTGGGATAAGACCCTC
AGATTGTGGGATTTAAGAACTGGTACCACCTACAAGAGATTCGTTGGTCACCAATCTGAA
GTCTACTCCGTTGCCTTCTCCCCTGATAACAGACAAATTCTCTCCGCTGGTGCCGAAAGA
GAAATCAAGCTCTGGAACATTCTCGGTGAATGCAAGTTCTCCTCTGCTGAAAAGGAAAAC
CACTCTGACTGGGTCTCCTGCGTTAGATACTCCCCCATCATGAAGTCTGCCAACAAGGTT
CAACCCTTCGCTCCTTACTTCGCCTCTGTCGGTTGGGACGGTAGATTGAAGGTCTGGAAC
ACCAACTTCCAAATCAGATACACCTTCAAGGCTCACGAATCCAACGTTAACCACTTATCC
ATCTCCCCCAACGGTAAGTACATCGCCACCGGTGGTAAGGATAAGAAGCTCTTGATCTGG
GATATCCTCAACCTCACCTATCCTCAAAGAGAATTCGACGCTGGTTCCACCATCAACCAA
ATCGCTTTCAACCCCAAGCTCTAATGGGTTGCCGTCGGTACCGACTAAGGTGTCAAGATC
TTCAACCTCATGACTCAATCCAAGGCTCCCGTCTGCACCATTGAAGCTGAACCCATCACC
AAGGCTGAAGGACAAAAGGGTAAGAATCCCCAATGTACCTCTTTGGCTTGGAACGCTTTG
GGTAAGAAATTATTCGCTGGTTTCACCGATGGTGTCATCAGAACTTTCTCTTTCGAAACC
TCTGCTAACTGA

>TTHERM_01113100(protein)
MADNSSLDIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEE
QNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE
VYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKV
QPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW
DILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPIT
KAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSAN

>TTHERM_01113100(gene)
ATGGCTGATAATTCATCTTTAGATATCCAAGTTGTCAAGAGAGGTATCCTCGAAGGTCAC
TCTGACTGGGTCACTTCCATCGTCGCTGGTTTCTCCCAAAAGGAAAACGAAGACTCCCCT
GTCTTGATCTCCGGTTCCAGAGATAAGACCGTCATGATCTGGAAATTGTACGAAGAAGAA
CAAAACGGTTACTTCGGTATCCCCCACAAGGCCCTCACTGGTCACAACCACTTCGTCTCC
GACTTGGCCCTCTCTCAAGAAAACTGCTTCGCCATCTCCTCTTCTTGGGATAAGACCCTC
AGATTGTGGGATTTAAGAACTGGTACCACCTACAAGAGATTCGTTGGTCACCAATCTGAA
GTCTACTCCGTTGCCTTCTCCCCTGATAACAGACAAATTCTCTCCGCTGGTGCCGAAAGA
GAAATCAAGCTCTGGAACATTCTCGGTGAATGCAAGTTCTCCTCTGCTGAAAAGGAAAAC
CACTCTGACTGGGTAAGAATATTTACATATTATTATAATAGAGCCAGAAAAAAAAACAAA
ATTTGCGGATATAATTCTAAATTATTTAGCTAGATTCTGACAAAAGTCTAAATAGCATAA
AAATGTGGGATTAATAGAAAATTGTAACACTCTAAGTACAATTACATAAAGGGATTAAAA
TATTTACATATAAGTGCTTTAAAATATAATTTATGATATTTATTTTTGGCAATAATTCAA
AATGTTATACAACTACGAGTAATTAAGGCTCGCTCCCATAATATAAAAACCACACAAATT
AAGAATGAAACTCAATTTTTAGAAGAATGATATACCTAGCTCCTTTTTATAATGGATTTA
GTTTAAAATTTAGAATTATAGGATCTTTTGAGCTTTTTTATGGCATTTAAAAAAATTATA
AATTTGTAAATTAATATTTTACTTACTTTTTTGTTAATATAAATTAGGTCTCCTGCGTTA
GATACTCCCCCATCATGAAGTCTGCCAACAAGGTTCAACCCTTCGCTCCTTACTTCGCCT
CTGTCGGTTGGGACGGTAGATTGAAGGTCTGGAACACCAACTTCCAAATCAGATACACCT
TCAAGGCTCACGAATCCAACGTTAACCACTTATCCATCTCCCCCAACGGTAAGTACATCG
CCACCGGTGGTAAGGATAAGAAGCTCTTGATCTGGGATATCCTCAACCTCACCTATCCTC
AAAGAGAATTCGACGCTGGTTCCACCATCAACCAAATCGCTTTCAACCCCAAGCTCTAAT
GGGTTGCCGTCGGTACCGACTAAGGTGTCAAGATCTTCAACCTCATGACTCAATCCAAGG
CTCCCGTCTGCACCATTGAAGCTGAACCCATCACCAAGGCTGAAGGACAAAGTAAAATAA
ACTTCTTTTTCTTCTTTTCAATTAATTTATTATAGAAATTCAATTATAATTTATTAACTT
AATTTTTATTAATTTACAGAGGGTAAGAATCCCCAATGTACCTCTTTGGCTTGGAACGCT
TTGGGTAAGAAATTATTCGCTGGTTTCACCGATGGTGTCATCAGAACTTTCTCTTTCGAA
ACCTCTGCTAACTGA