Identifiers and Description
Gene Model Identifier
TTHERM_01113100Standard Name
RACK1 (Receptor for Activated C Kinase 1)Aliases
PreTt01916 | 240.m00039Description
Homolog of yeast ASC1Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00400 ) WD domain, G-beta repeat
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_01113100
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_19407.1 9.997093137033517e-262 hypothetical protein (345 aa)
Oxytricha Contig1225.1.g107 1.99970314379378e-94 WD domain, G-beta repeat
DictyBase DDB_G0275045 9.996373193201036e-79 gpbB on chromosome: 2 position
5266629 to 5267764
WormBase WBGene00010556 4.001371804839974e-78 locus:rack-1 Guanine nucleot
ide-binding protein subunit be
ta-2-like 1 status:Confirmed
UniProt:Q21215 protein_id
:CAA93514.1
SGD YMR116C 1.000296925633081e-74 ASC1 G-protein beta subunit an
d guanine nucleotide dissociat
ion inhibitor for Gpa2p; ortho
log of RACK1 that inhibits tra
nslation; core component of th
e small (40S) ribosomal subuni
t; represses Gcn4p in the abse
nce of amino acid starvation
Stentor Coeruleus SteCoe_13450 8.194012623990515e-40
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_01113100(coding)
ATGGCTGATAATTCATCTTTAGATATCCAAGTTGTCAAGAGAGGTATCCTCGAAGGTCAC
TCTGACTGGGTCACTTCCATCGTCGCTGGTTTCTCCCAAAAGGAAAACGAAGACTCCCCT
GTCTTGATCTCCGGTTCCAGAGATAAGACCGTCATGATCTGGAAATTGTACGAAGAAGAA
CAAAACGGTTACTTCGGTATCCCCCACAAGGCCCTCACTGGTCACAACCACTTCGTCTCC
GACTTGGCCCTCTCTCAAGAAAACTGCTTCGCCATCTCCTCTTCTTGGGATAAGACCCTC
AGATTGTGGGATTTAAGAACTGGTACCACCTACAAGAGATTCGTTGGTCACCAATCTGAA
GTCTACTCCGTTGCCTTCTCCCCTGATAACAGACAAATTCTCTCCGCTGGTGCCGAAAGA
GAAATCAAGCTCTGGAACATTCTCGGTGAATGCAAGTTCTCCTCTGCTGAAAAGGAAAAC
CACTCTGACTGGGTCTCCTGCGTTAGATACTCCCCCATCATGAAGTCTGCCAACAAGGTT
CAACCCTTCGCTCCTTACTTCGCCTCTGTCGGTTGGGACGGTAGATTGAAGGTCTGGAAC
ACCAACTTCCAAATCAGATACACCTTCAAGGCTCACGAATCCAACGTTAACCACTTATCC
ATCTCCCCCAACGGTAAGTACATCGCCACCGGTGGTAAGGATAAGAAGCTCTTGATCTGG
GATATCCTCAACCTCACCTATCCTCAAAGAGAATTCGACGCTGGTTCCACCATCAACCAA
ATCGCTTTCAACCCCAAGCTCTAATGGGTTGCCGTCGGTACCGACTAAGGTGTCAAGATC
TTCAACCTCATGACTCAATCCAAGGCTCCCGTCTGCACCATTGAAGCTGAACCCATCACC
AAGGCTGAAGGACAAAAGGGTAAGAATCCCCAATGTACCTCTTTGGCTTGGAACGCTTTG
GGTAAGAAATTATTCGCTGGTTTCACCGATGGTGTCATCAGAACTTTCTCTTTCGAAACC
TCTGCTAACTGA>TTHERM_01113100(protein)
MADNSSLDIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEE
QNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE
VYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKV
QPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW
DILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPIT
KAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSAN>TTHERM_01113100(gene)
ATGGCTGATAATTCATCTTTAGATATCCAAGTTGTCAAGAGAGGTATCCTCGAAGGTCAC
TCTGACTGGGTCACTTCCATCGTCGCTGGTTTCTCCCAAAAGGAAAACGAAGACTCCCCT
GTCTTGATCTCCGGTTCCAGAGATAAGACCGTCATGATCTGGAAATTGTACGAAGAAGAA
CAAAACGGTTACTTCGGTATCCCCCACAAGGCCCTCACTGGTCACAACCACTTCGTCTCC
GACTTGGCCCTCTCTCAAGAAAACTGCTTCGCCATCTCCTCTTCTTGGGATAAGACCCTC
AGATTGTGGGATTTAAGAACTGGTACCACCTACAAGAGATTCGTTGGTCACCAATCTGAA
GTCTACTCCGTTGCCTTCTCCCCTGATAACAGACAAATTCTCTCCGCTGGTGCCGAAAGA
GAAATCAAGCTCTGGAACATTCTCGGTGAATGCAAGTTCTCCTCTGCTGAAAAGGAAAAC
CACTCTGACTGGGTAAGAATATTTACATATTATTATAATAGAGCCAGAAAAAAAAACAAA
ATTTGCGGATATAATTCTAAATTATTTAGCTAGATTCTGACAAAAGTCTAAATAGCATAA
AAATGTGGGATTAATAGAAAATTGTAACACTCTAAGTACAATTACATAAAGGGATTAAAA
TATTTACATATAAGTGCTTTAAAATATAATTTATGATATTTATTTTTGGCAATAATTCAA
AATGTTATACAACTACGAGTAATTAAGGCTCGCTCCCATAATATAAAAACCACACAAATT
AAGAATGAAACTCAATTTTTAGAAGAATGATATACCTAGCTCCTTTTTATAATGGATTTA
GTTTAAAATTTAGAATTATAGGATCTTTTGAGCTTTTTTATGGCATTTAAAAAAATTATA
AATTTGTAAATTAATATTTTACTTACTTTTTTGTTAATATAAATTAGGTCTCCTGCGTTA
GATACTCCCCCATCATGAAGTCTGCCAACAAGGTTCAACCCTTCGCTCCTTACTTCGCCT
CTGTCGGTTGGGACGGTAGATTGAAGGTCTGGAACACCAACTTCCAAATCAGATACACCT
TCAAGGCTCACGAATCCAACGTTAACCACTTATCCATCTCCCCCAACGGTAAGTACATCG
CCACCGGTGGTAAGGATAAGAAGCTCTTGATCTGGGATATCCTCAACCTCACCTATCCTC
AAAGAGAATTCGACGCTGGTTCCACCATCAACCAAATCGCTTTCAACCCCAAGCTCTAAT
GGGTTGCCGTCGGTACCGACTAAGGTGTCAAGATCTTCAACCTCATGACTCAATCCAAGG
CTCCCGTCTGCACCATTGAAGCTGAACCCATCACCAAGGCTGAAGGACAAAGTAAAATAA
ACTTCTTTTTCTTCTTTTCAATTAATTTATTATAGAAATTCAATTATAATTTATTAACTT
AATTTTTATTAATTTACAGAGGGTAAGAATCCCCAATGTACCTCTTTGGCTTGGAACGCT
TTGGGTAAGAAATTATTCGCTGGTTTCACCGATGGTGTCATCAGAACTTTCTCTTTCGAA
ACCTCTGCTAACTGA