Identifiers and Description

Gene Model Identifier

TTHERM_01164180

Standard Name

RAB6D

Aliases

PreTt18022 | 260.m00029 | 3796.m00127

Description

Rab VI family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_01164180

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_20825.11.999658401959794e-176Ras family protein (262 aa)
DictyBaseDDB_G02680681.0002758036576784e-62rab6 on chromosome: 1 position
1398472 to 1399280
SGDYLR262C2.0002571866765887e-62YPT6 Rab family GTPase, Ras-li
ke GTP binding protein involve
d in the secretory pathway, re
quired for fusion of endosome-
derived vesicles with the late
Golgi, maturation of the vacu
olar carboxypeptidase Y; has s
imilarity to the human GTPase,
Rab6
WormBaseWBGene000042699.000460706442912e-62locus:rab-6.1 Ras-related pr
otein Rab-6.1 status:Confirm
ed UniProt:P34213 protein_
id:CAA77590.1
OxytrichaContig5831.0.g61.9999167998962255e-60Ras family
Stentor CoeruleusSteCoe_61772.1705220113036395e-29

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01164180(coding)
ATGCATACAAACGATAGCAGTAGAATGACTTCTAATTTCTCGAATACATCGAGAGTTAAG
CACAAAATTATCTTTTTAGGTGATCAACATGTCGGAAAAACATGTATTATTGAACGTTTT
ATGTATGATGTATTTGACGAAAAGCCTCATCCTACTGTAGGTGTAGATTTTCTTGCAAAG
ACTCTACATATTGATGATAAGAGTATTAGACTTTCATTGTGGGATACTGCAGGATAGGAA
AGATTCAGAAGTCTTATCCCAAGTTATTTAAGAGATGCCACATGCGCAGTAATCGTATTT
GATGTTACTAACAAAGAAAGTTTTAGTAATGTAGATAGATGGATTAAGGACTATAAAGAC
AACAGAGGTAGCGAAGCACCATGCGTTTTAGTAGCAAATAAAATTGATTTAAAACTAACA
AGGGAAGTTTAATTAGCTGATTTAGAAAAGAAAGCAAAGGAAAATAATATGAAATTTTAC
GAAATATCTGCAAAAACGGGTGAAAATGTTGCTAATATGTTTAAGGATATGGCTATTTCT
CTTTAGCCTGTAGAAAATAGTATTCTTTCTCCTAACGCAGATAATCTAAATAATTAAAAA
AAAGATTACTAGTTTGCAAATCAAAATAAATAGCCCTCTACAGGTAACACAGGAGCTCCA
GCTTAGCCTGCTACAAAAGCAAGTACTTAATAAACATAAGCGAATTAAAACTTTACGTTG
AAAAACGATAAGCCCCTTTTAAATGGATAAAATTAGTAGAGTGGTGGTAATACAGGTGGT
TCTGGAAAATGCTGCTGA


>TTHERM_01164180(protein)
MHTNDSSRMTSNFSNTSRVKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAK
TLHIDDKSIRLSLWDTAGQERFRSLIPSYLRDATCAVIVFDVTNKESFSNVDRWIKDYKD
NRGSEAPCVLVANKIDLKLTREVQLADLEKKAKENNMKFYEISAKTGENVANMFKDMAIS
LQPVENSILSPNADNLNNQKKDYQFANQNKQPSTGNTGAPAQPATKASTQQTQANQNFTL
KNDKPLLNGQNQQSGGNTGGSGKCC


>TTHERM_01164180(gene)
ATGCATACAAACGATAGCAGTAGAATGACTTCTAATTTCTCGAATACATCGAGAGTTAAG
CACAAAATTATCTTTTTAGGTGATCAACATGTCGGAAAAACATGTATTATTGAACGTTTT
ATGTATGATGTATTTGACGAAAAGCCTCATGTAAATTAACATAATTTAGCATAAGTTCAA
TTCAAAGACAGATAAAAACCAATAACTATTAATTATAAAAAAAGCCTACTGTAGGTGTAG
ATTTTCTTGCAAAGACTCTACATATTGATGATAAGAGTATTAGACTTTCATTGTGGGATA
CTGCAGGATAGGAAAGATTCAGAAGTCTTATCCCAAGTTATTTAAGAGATGCCACATGCG
CAGTAATCGTATTTGATGTTACTAGTAAATTATTTAAAAAGATAAACATTAATACATGAA
GATTTTTCAAGAAATAGTATAATTGATATACTTTAAAATTATTTTTTTATCAGAATAAAT
ACGTCTTCAATTAAATAATATATTTATATGAAACATGAAAAATCTTAATTATTCAACTAC
TATAAAAACAACTTTTTTAATAATTTTTTATTAAAAGACAAAGAAAGTTTTAGTAATGTA
GATAGATGGATTAAGGACTATAAAGACAACAGAGGTAGCGAAGCACCATGCGTTTTAGTA
GCAAATAAAATTGATTTAAAACTAAGTAAGCAGAATTAATATTTAATTGTTATGATATAT
TTAAAGCAAAGAAGGAATGCATAAAATTTAAATTCATAAAACGAAAAAAATGACTTTAAA
TCCTTAATTTTAAATTTTAATTTATAAAAATAGCAAGGGAAGTTTAATTAGCTGATTTAG
AAAAGAAAGCAAAGGAAAATAATATGAAATTTTACGAAATATCTGCAAAAACGGGTGAAA
ATGTTGCTAATATGTTTAAGGATATGGCTATTTCTCTTTAGCCTGTAGAAAATAGTATTC
TTTCTCCTAACGCAGATAATCTAAATAATTGTAAATTTATAAAAAAAGATGTAAGCAAAA
TCATAAATTTATTTTAAAATTTGTAAAATAGAAAAAAAAGATTACTAGTTTGCAAATCAA
AATAAATAGCCCTCTACAGGTAACACAGGAGCTCCAGCTTAGCCTGCTACAAAAGCAAGT
ACTTAATAAACATAAGCGAATTAAAACTTTACGTTGAAAAACGATAAGCCCCTTTTAAAT
GGATAAAATTAGTAGAGTGGTGGTAATACAGGTGGTTCTGGAAAATGCTGCTGA