Identifiers and Description

Gene Model Identifier

TTHERM_00290900

Standard Name

RAB69

Aliases

PreTt26022 | 26.m00374 | 3688.m00166

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( TIGR00650 ) GTP-binding conserved hypothetical protein

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00290900

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_09381.18.001138423028812e-95Ras family protein (400 aa)
WormBaseWBGene000042692.00017271388466e-38locus:rab-6.1 Ras-related pr
otein Rab-6.1 status:Confirm
ed UniProt:P34213 protein_
id:CAA77590.1
OxytrichaContig15751.0.0.g873.9997566980151843e-38Ras family
DictyBaseDDB_G02719841.999002769139511e-37rab5A on chromosome: 2 positio
n 1113320 to 1114208
SGDYLR262C3.0001084582952455e-37YPT6 Rab family GTPase, Ras-li
ke GTP binding protein involve
d in the secretory pathway, re
quired for fusion of endosome-
derived vesicles with the late
Golgi, maturation of the vacu
olar carboxypeptidase Y; has s
imilarity to the human GTPase,
Rab6
Stentor CoeruleusSteCoe_101891.5628821893349888e-18

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00290900(coding)
ATGGCATCGAGAAGAGATAATAAAATTCTAGAAAGCAAGGTTATACTTCTTGGAGAATAA
AGAGTAGGTAAATCAAGTATAATTAATAGATTCATAAATGACTAGTTTGATCCAGATTCT
AAACCAACTTCTATCGGAGGAAATCAATAGGCTTATTCAGATAAAATAATTTAAGTTTTC
AATGGAGGCAAAATTAAAATAAATTTATGGGATACAGCTGGGCAAGAGATATTTTCTTCT
ATTGTTTCTGTATACTATAAGTCTGCTTAAGCTGCTATAGTTGTGTTTGATCTTACTGAT
AGAAGCACAATAAATAAGGCACACAAATGGATTTAGGAAGTACAAAATAATAATGAAAAA
AACGATTGCAAAATTATTTTGGTTGGTAATAAATATGATAAAAATAATGAAAGGTAGATT
AAAACTGAAGAAGGATAAGAAATTGCAAAACAATATAAAATTAAGTATTATGAAACTTCT
GCTAAAAATTCTTATAATATAAAGGAGCTCTTCTCAGATTTAGCTGAAGAACTCTACACT
GACAATAAGAATGCTACTAAAAAACCATCTAGAATTACAATTGATAATTTTAAAAAATAA
AAAGATACAAAATCTAAAGAAGATAGCAGCTGTTCATGCTGA


>TTHERM_00290900(protein)
MASRRDNKILESKVILLGEQRVGKSSIINRFINDQFDPDSKPTSIGGNQQAYSDKIIQVF
NGGKIKINLWDTAGQEIFSSIVSVYYKSAQAAIVVFDLTDRSTINKAHKWIQEVQNNNEK
NDCKIILVGNKYDKNNERQIKTEEGQEIAKQYKIKYYETSAKNSYNIKELFSDLAEELYT
DNKNATKKPSRITIDNFKKQKDTKSKEDSSCSC


>TTHERM_00290900(gene)
ATGGCATCGAGAAGAGATAATAAAATTCTAGAAAGCAAGGTTATACTTCTTGGAGAATGT
ATGTCATTTTGTTTATTTGCTCTAAAAATAATCAAGCCTTTAAAACTATTTTGTTAAACT
TATTAATAAATTATATTGTATGATAAATAGAAAGAGTAGGTAAATCAAGTATAATTAATA
GATTCATAAATGACTAGTTTGATCCAGATTCTAAACCAACTTCTATCGGAGGAAATCAAT
AGGCTTATTCAGATAAAATAATTTAAGTTTTCAATGGAGGCAAAATTAAAATAAATTTAT
GGGTAAATTATTCTTAATTTATTTTAATTCTTAGTTTTAGGATTAGCTATTTAAAGATTA
TTCATTTACGCACACCACCAATCTAATAAACTATTTAAAGAATAATTGAAAATTAAATTT
AAAAACTGATATAATAAAGGATACAGCTGGGCAAGAGATATTTTCTTCTATTGTTTCTGT
ATACTATAAGTCTGCTTAAGCTGCTATAGTTGTGTTTGATCTTACTGATAGAAGCACAAT
AAATAAGGTAATTATTTTTAAGAATAACAAAATGAGGATAGAAACTAATTACTTTAGCAT
AAATAAATAATCAAGTTTTATTTGCACAACATTCATGCATCTTTTTAAAAGAATAAAGAA
TTTATGTATTATTTATTAAATTAATTAGGCACACAAATGGATTTAGGAAGTACAAAATAA
TAATGAAAAAAACGATTGCAAAATTATTTTGGTTGGTAATAAATATGATAAAAATAATGA
AAGGTAGATTAAAACTGAAGAAGGATAAGAAATTGCAAAACAATATAAAATTAAGTATTA
TGAAACTTCTGCTAAAAATTCTTATAATATAAAGGAGCTCTTCTCAGATTTAGCTGAAGG
TATTCTTAAATATTTCTTTTTCTATACTTACAGAAATTTTTACTTGATTAGGAATTAAAA
TTAATAATATTATTAAAATACTTAATTAAAAAAACTAACTAAAAACAGACAGACAGATGA
TAATAAATAGTATCATCTTAACTAATATTTATTTTTTATCCAAATTATTTGATAAGAAAA
TCAACTCTCTAAGATAAAAAATTGGTAATTTACTAAAAAAACAGATTCAAAAATAGTAAA
AAACAAATTATTTTTTAGCATACAAAGAAAAAAGCAAGTATTATTTGTTTAAAAAAGAAA
AAAACAAGTTTAAATAAAAATGCAAGTAAGTTAGTAATTTAATTGTAAATAATATTTTTT
ATAGTCTTGAGGAAAGTTAAAAAGATTAAAAATTAAATATTTTAAAGTAGATTGATAACT
AAGAGAGAATGATTTATGATAAATAAGATTGAAGATATATTTTGCTTTATTAAAAAAAAT
AAATTTAATTTTAAGTTAATTTACATTTTAAAAAATAGAACTCTACACTGACAATAAGAA
TGCTACTAAAAAACCATCTAGAATTACAATTGATAATTTTAAAAAATAAAAAGATACAAA
ATCTAAAGAAGATAGCAGCTGTTCATGCTGA