Identifiers and Description

Gene Model Identifier

TTHERM_00637520

Standard Name

RAB68 (RAB)

Aliases

PreTt19755 | 91.m00170

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00071 ) Ras family
• ( PF08477 ) Miro-like protein
• ( PF00025 ) ADP-ribosylation factor family
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.6%

TetraMine Data

TTHERM_00637520

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_40856.1	2.000319284850678e-127	Ras family protein (218 aa)
DictyBase	DDB_G0277101	4.000054831110256e-33	rab11C on chromosome: 2 positi on 7509311 to 7510238
SGD	YER031C	4.001033848388204e-30	YPT31 Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediate s intra-Golgi traffic or the b udding of post-Golgi vesicles from the trans-Golgi
Oxytricha	Contig9955.0.g63	8.00089003463867e-30	Ras family
WormBase	WBGene00004274	2.000130478826482e-26	locus:rab-11.1 status:Confir med UniProt:O01803 protein _id:CCD71701.1
Stentor Coeruleus	SteCoe_34725	0.00000000000003442477108469977

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00637520(coding)
ATGGCTGAAAGAAATAAATAAGAACCATTATAATTTAAAATATTTATTGTAGGTGATGCT
CAAGTTGGAAAGACTTATGTTGTAAATAAAATAATATAAAAATCTAGAAATTCTACTAAG
TATAAGCCTACTTATGGATTCAACTACCATATTTGGGAGCATGAGATCCATGAGAATAGA
CATGTAGTATTTTAACTTTGGGACACAGCTGGCTAAGAAAAATACAGAGGCATTACAAAA
GAGCACTACAAAAGTGGAGTTGGTGCTATAATAGTTTATGATATAACTAAAGAAGATTCA
TTTTGTAATGTAAAAAATTGGATAGAGGAGATTAAGAGCAATTGCATAGAGCAAGAAGAA
GAAGATCCATATATAATTGTAATTGGGAACAAAAAAGATCTAAAAAGTTAAAGAAAAGTT
GGGTATGAAGAGGCTTACTAAATTGTTAAGAAAGAAGATAAAGATATAGATATTTTTGAA
ATATCAACAGTTTCAGCAGATCCTGTTGATACTTCATATTTTGAAAAAGTAATCAACCAT
TTTTTTAAAAAAATATATGAAAGACTCAAAAAAAGAGGAATTCTATCTGATAATGATCCT
AATATTAGATTGGCTGATACACAAGTATAAACAAGTAAATCGTGTTGTTGTTGTTGA

>TTHERM_00637520(protein)
MAERNKQEPLQFKIFIVGDAQVGKTYVVNKIIQKSRNSTKYKPTYGFNYHIWEHEIHENR
HVVFQLWDTAGQEKYRGITKEHYKSGVGAIIVYDITKEDSFCNVKNWIEEIKSNCIEQEE
EDPYIIVIGNKKDLKSQRKVGYEEAYQIVKKEDKDIDIFEISTVSADPVDTSYFEKVINH
FFKKIYERLKKRGILSDNDPNIRLADTQVQTSKSCCCC

>TTHERM_00637520(gene)
ATTTTTTTTTGATTGAAATTAATTAAGTTATCTATCTTAATAACCTCTTAGCGTATCTAA
AAATAAGTTGAAACCAATGGCTGAAAGAAATAAATAAGAACCATTATAATTTAAAAGTAT
ATTACTAAGATAATTTCTATGATTAAAAATAAATTTGCTATAAATGTTTAGTATTTATTG
TAGGTGATGCTCAAGTTGGAAAGACTTATGTTGTAAATAAGTAAACATTTATTTATATTT
TGCTTTAAATTATGCCCACTCTTTTTAGAATAATATAAAAATCTAGAAATTCTACTAAGT
ATAAGCCTACTTATGGATTCAACTACCATATTTGGGAGCATGAGATCCATGAGAATAGAC
ATGTAGTATTTTAACTTTGGGACACAGCTGGCTAAGAAAAATACAGAGGCATTACAAAAG
AGTATTTATTTTGTTTTAAATAATTAATTAGTTAATGTGATAACCAATAATAGGCACTAC
AAAAGTGGAGTTGGTGCTATAATAGTTTATGATATAACTAAAGAAGATTCATTTTGTAAT
GTAAAAAATTGGATAGAGGAGATTAAGAGCAATTGCATAGAGCAAGAAGAAGAAGATCCA
TATATAATTGTAATTGGGAACAAAAAAGATCTAAAAAGTTAAAGAAAAGTTGGGTATGAA
GAGGCTTACTAAATTGTTAAGAAAGAAGATAAAGATATAGATATTTTTGAAATATCAACA
GTTTCAGCAGATCCTGTTGATACTTCATATTTTGAAAAAGTAATCAACCATTTTTTTAAA
AGTAAATTATTCCTTTTGTTAATTCTTCAACTTAGTTTTTCTTCAATGAATATCAGAAAT
ATATGAAAGACTCAAAAAAAGAGGAATTCTATCTGATAATGATCCTAATATTAGATTGGC
TGATACACAAGTATAAACAAGTAAATCGTGTTGTTGTTGTTGAAAAAGAAAATGTATAAA
AATAAATAAATAAATATTACCAGTAATATTAAACATAAAAATACTCAATTAAATTAGAGT
TTAATTTTAATAATGGCTTAATAGTTGGTTCTAAATTAAATCTAGTGCCCTATTTACTCA
TTTATTTAACATTTTATTATAAAAAAGTTTAAATTTTATTAATTTTTACTTATATTTACG
TATTGAAATTTTATAAAAAATACATATTTTAATTATGCAATACATGTTTGATAATTAAGG
GATTTAATTGTTTATTTGTTAAAATTCATTTCA