Identifiers and Description

Gene Model Identifier

TTHERM_01129680

Standard Name

RAB62

Aliases

PreTt30048 | 247.m00044 | 3817.m00188

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 14.7%

TetraMine Data

TTHERM_01129680

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_20793.14.001878793042739e-150Ras family protein (214 aa)
OxytrichaContig11247.0.g575.998245846387657e-76Ras family
WormBaseWBGene000042665.001742359316081e-68locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
DictyBaseDDB_G02800432.0001081030036656e-67rab8A on chromosome: 3 positio
n 3266503 to 3267523
SGDYFL038C2.0001081030036656e-67YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor CoeruleusSteCoe_200347.281290178321643e-33

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01129680(coding)
ATGGATTCAGGATAATATGATCACTTATTTAAAATTCTATTGATTGGTAATTCAGGTGTA
GGCAAAACTTGCATGCTCATGCGTTATTCAGAAAACTAATTTACCTACAATTTCTATAAT
ACTATCGGAGTCGACTTCAAAATTAAAGCTTTAAGGTTAGAAGACAAGAATATTAAACTT
CAAATCTGGGATACTGCTGGACAAGACCGTTTTAGAACTATTACCTGTAGTTATTATAGA
GGTGCTCATGGCATTTTGATTGTTTATGACATTACTGAAAGGGAATCATTTGATAACGTT
AAGACATGGATGGTAGAAATTGAAAAGCATGCCAAAAAAGGAGTATAAAAAATGTTAATT
GGTAATAAATCTGATTGTAGTAATAGAGCTGTTTCTTACGAAGAAGGATTTGAATTAGCT
AAATAATACTAAATACCTTTTGCTGAAACATCAGCCAAAAATGCCAGCAATATAGATTTA
GCCTTCACTAATCTTGCTAAGAATATCTTGGGTAGTGGTTAAGTTTTGAATACTGCACCT
TCATAGGGAATGAAGATTCAATAAAATAAATACAATACTTAATAAAGTGGCTCCAGACAA
GTTCAACAAAACTAAAAGAATTAGGGAGATGATTGCTGTTGA


>TTHERM_01129680(protein)
MDSGQYDHLFKILLIGNSGVGKTCMLMRYSENQFTYNFYNTIGVDFKIKALRLEDKNIKL
QIWDTAGQDRFRTITCSYYRGAHGILIVYDITERESFDNVKTWMVEIEKHAKKGVQKMLI
GNKSDCSNRAVSYEEGFELAKQYQIPFAETSAKNASNIDLAFTNLAKNILGSGQVLNTAP
SQGMKIQQNKYNTQQSGSRQVQQNQKNQGDDCC


>TTHERM_01129680(gene)
ATGGATTCAGGATAATAGTAATTTATTTAAGAACAAAAGCATTAAAAATTTAAGCCAACT
AGACATATAGGAGGAGAACTTTACTCCCTTAGACATTATTAACAAGATGAAAAAACATTT
AAATTTGTTAATTTTAATAATAATATAAAATAGTGATCACTTATTTAAAATTCTATTGAT
TGGTAATTCAGGTGTAGGCAAAACTTGCATGCTCATGCGTTATTCAGTAATCAATTTAAA
ATCCTTCTCAGTTCAAGCCGTTTATATTAATTGCTATTTCAATAATAACAGGAAAACTAA
TTTACCTACAATTTCTATAATACTATCGGAGTCGACTTCGTAATTTGAATTCATTGATTT
ACTAATTTAACTTTAATTTCATATTTTATTCTTAAAACTATAAACAAATAGCTACTACTT
CAATTTTTTTCTAAATAAAACATTTTTTGAATATAAAATAGAAAATTAAAGCTTTAAGGT
TAGAAGACAAGAATATTAAACTTCAAATCGTAATAGGATTATTTATCTTACAAGTTAGAT
TAAAATCGCAAACAAACACTTATTCATATTATTAATTCGTTAAACAAGAATGTAAATTAC
CTAAAAAATTCTTAAAGAATCAAGCTAATCGAATTATAATAAGATAAATGCTTATCAAAA
AAGCTACCAAAAGCGATTTTAATCTTGCTTATGAATTAACATTGTTTATTCCAAAATTCT
TAGGTTTTTTTTTTATTATTTAAAGTGGGATACTGCTGGACAAGACCGTTTTAGAACTAT
TACCTGTAGTTATTATAGGTAAGCTTAAAAGAATAATATCTTTAATCCAAATTTTTTATT
TGACTCCTTTGAAAATTGAAGATTATAAATTAAAATTTTAAATAAATTAGAGGTGCTCAT
GGCATTTTGATTGTTTATGACATTACTGAAAGGGAATCATTTGATAACGTTAAGACATGG
ATGGTAGAAATTGAAAAGTAGGAAAAAATAAATTTTGAATTAAAAATAAATAAAATTAAT
ATATTTTTTTTTGTAATAAATTAGGCATGCCAAAAAAGGAGTATAAAAAATGTTAATTGG
TAATAAATCTGATTGTAGTAATAGAGCTGTTTCTTACGAAGAAGGATTTGAATTAGGTAT
TTGGTCTAATTTAAATCTATTTTTTTTTATTTAAATATTTTTGTTAATTAATTAAAGCTA
AATAATACTAAATACCTTTTGCTGAAACATCAGCCAAAAATGCCAGCAATATAGATTTAG
CCTTCACTAATCTTGCTAAGAATATGTAATTTTAAATTTTAAATAATTGTTTTAACTAAT
CAAGTTTATTTATCTTTATAAAAAGCTTGGGTAGTGGTTAAGTTTTGAATACTGCACCTT
CATAGGGAATGAAGATTCAATAAAATAAATACAATACTTAATAAAGTGGCTCCAGACAAG
TTCAACAAAACTAAAAGAATTAGGGAGATGATTGCTGTTGA