Identifiers and Description

Gene Model Identifier

TTHERM_00727540

Standard Name

RAB60

Aliases

PreTt07255 | 118.m00083 | 3739.m00006

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF00009 ) Elongation factor Tu GTP binding

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00727540

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_17908.11.9995739544551218e-152Ras family protein (251 aa)
DictyBaseDDB_G02800435.001636743996964e-56rab8A on chromosome: 3 positio
n 3266503 to 3267523
WormBaseWBGene000042723.998862432046419e-53locus:rab-8 status:Confirmed
UniProt:G5EFC1 protein_id
:CCD68351.1
OxytrichaContig11247.0.g572.000555387360374e-52Ras family
SGDYFL038C1.9998745702418095e-48YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor CoeruleusSteCoe_249851.185064864233981e-27

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00727540(coding)
ATGAATAAACCAAATTTAAGGCAATTCAAAGATAACGTAGACTACGTTATTAAGATACTT
CTAGTTGGTGATAGTGCAGTAGGAAAGACTAATATTATGCTTAGATATTGTGATCATGGA
TATAAAACAGCTCACATGGTAACAGTAGGAGTCGATTTTAAGATGAAAACTATAAAAGTA
GATTAGAAACAGCTTAAATTAATAATTTGGGATACTGCTGGACAAGAAAAATATTAAGCT
ATGGCTTAAAGTATATATAATGGAGCTCAAGCAGTTATTGTCGTATACAGCATTACTGAT
AGAAATAGTTTCATGAATGTCAGAAATTGGATTAAGTAAATTTCAGAGCATGTTCCAGAT
TAGATTATTATAACCCTAGTAGGAAATAAATGCGATGAAAGCGAAAATTAGAGAAAAGTT
GATAAAGCAGAAGGATAGGCTCTAGCTGATGAATATAAAATTCCTTTCTTTGAATCATCA
GCAAAAGAAAATATTAACATAACATAGTTATTTGAAGAAACAGCTAGATAAATAAAAGAA
AAAATTTTAAATGATATTAATACTGTTGGAGACAGTGCATAAAAAATTAAATTTGACACT
TTACAGGTCGGTTCTCCATCACCATAAAATAATGATAATTTCAAATTAACAGCAGAAAAA
AGCAGATAGTCTGAATAAATGTATACGGAAACAACTCCTTTCGATACAAAAACTCCTTAA
TCATAAAATAATGTTAGTAACTGTCAATGCTGA


>TTHERM_00727540(protein)
MNKPNLRQFKDNVDYVIKILLVGDSAVGKTNIMLRYCDHGYKTAHMVTVGVDFKMKTIKV
DQKQLKLIIWDTAGQEKYQAMAQSIYNGAQAVIVVYSITDRNSFMNVRNWIKQISEHVPD
QIIITLVGNKCDESENQRKVDKAEGQALADEYKIPFFESSAKENINITQLFEETARQIKE
KILNDINTVGDSAQKIKFDTLQVGSPSPQNNDNFKLTAEKSRQSEQMYTETTPFDTKTPQ
SQNNVSNCQC


>TTHERM_00727540(gene)
ATGAATAAACCAAATTTAAGGCAATTCAAAGATAACGTAGACTACGTTATTAAGATACTT
CTAGTTGGTGATAGTGCAGTAGGAAAGACTAATATTATGCTTAGATATTGTGATCATGGA
TATAAAACAGCTCACATGGTAACAGTAGGAGTCGATTTTAAGATGAAAACTATAAAAGTA
GATTAGAAACAGCTTAAATTAATAATTTGGGATACTGCTGGACAAGAAAAATATTAAGCT
ATGGCTTAAAGTATATATAATGGAGCTCAAGCAGTTATTGTCGTATACAGCATTACTGAT
AGAAATAGTTTCATGAATGTCAGAAATTGGATTAAGTAAATTTCAGAGCATGTTCCAGAT
TAGATTATTATAACCCTAGTAGGAAATAAATGCGATGAAAGCGAAAATTAGAGAAAAGTT
GATAAAGCAGAAGGATAGGCTCTAGCTGATGAATATAAAATTCCTTTCTTTGAATCATCA
GCAAAAGAAAATATTAACATAACATAGTTATTTGAAGAAACAGCTAGATAAATAAAAGAA
AAAATTTTAAATGATATTAATACTGTTGGAGACAGTGCATAAAAAATTAAATTTGACACT
TTACAGGTCGGTTCTCCATCACCATAAAATAATGATAATTTCAAATTAACAGCAGAAAAA
AGCAGATAGTCTGAATAAATGTATACGGAAACAACTCCTTTCGATACAAAAACTCCTTAA
TCATAAAATAATGTTAGTAACTGTCAATGCTGA