Identifiers and Description

Gene Model Identifier

TTHERM_00727520

Standard Name

RAB59

Aliases

PreTt07253 | 118.m00081 | 3739.m00004

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00727520

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_17907.11.000434858898539e-105small GTP-binding protein doma
in-containing protein (185 aa)
DictyBaseDDB_G02778673.998097515166115e-39rab1B on chromosome: 3 positio
n 743092 to 744234
OxytrichaContig15751.0.0.g878.003017249547689e-39Ras family
SGDYFL038C2.00017271388466e-38YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
WormBaseWBGene000042841.999002769139511e-37locus:rab-35 status:Confirme
d UniProt:Q9U2C3 protein_i
d:CAB57899.1
Stentor CoeruleusSteCoe_157781.5628821893349888e-18

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00727520(coding)
ATGTCTCAAATATCATAGCCATAATAAAATCAAAAAGAATAGTACGACTTCATGGTGAAA
GTAGTTTTAGTAGGTGATGAAGGAGTAGGTAAAACATAAATATCGAGGAGAATAGCAGGT
TTATAATATAACGAAAAGCATACTCCAACTATTGGAGTAGATTTCAAAGTTAAAACTATG
TAAGTAGGCAATAACATTATGAAATTTTAAGTATGGGATACTGCTGGCATACCTAAATAT
CGTGTATCAAATAAAGCTTAATACTCAGGAGCCGCTGCTGTTATAGTTATATTTAGCTTT
AATGATCTATAAAGCTTTGAGAGTGTTGAGAAATGGATATAAGAAATAAATTTTGAAAAT
TAGGATAGCTAAATAGTAAGAGTTTTAGTTGGAAATAAATGTGATTTTTAAAAGGAAGGA
AGATATGCCACTCCTATGGCTGCTGAATAATTAGCAAAGAGAAATAATATGGAATATATT
GAAGTATCTGCTAAAGAAAACCATAACGTTAGAGAGCTTTTCTAATTAGTAGGTTAACAA
ATATATAAAGAATTAATTGATCCTTAATGA


>TTHERM_00727520(protein)
MSQISQPQQNQKEQYDFMVKVVLVGDEGVGKTQISRRIAGLQYNEKHTPTIGVDFKVKTM
QVGNNIMKFQVWDTAGIPKYRVSNKAQYSGAAAVIVIFSFNDLQSFESVEKWIQEINFEN
QDSQIVRVLVGNKCDFQKEGRYATPMAAEQLAKRNNMEYIEVSAKENHNVRELFQLVGQQ
IYKELIDPQ


>TTHERM_00727520(gene)
ATGTCTCAAATATCATAGCCATAATAAAATCAAAAAGAATAGTACGACTTCATGGTGAAA
GTAGTTTTAGTAGGTGATGAAGGAGTAGGTAAAACATAAATATCGAGGAGAATAGCAGGT
TTATAATATAACGAAAAGCATACTCCAACTATTGGAGTAGATTTCAAAGTTAAAACTATG
TAAGTAGGCAATAACATTATGAAATTTTAAGTATGGGATACTGCTGGCATACCTAAATAT
CGTGTATCAAATAAAGCTTAATACTCAGGAGCCGCTGCTGTTATAGTTATATTTAGCTTT
AATGATCTATAAAGCTTTGAGAGTGTTGAGAAATGGATATAAGAAATAAATTTTGAAAAT
TAGGATAGCTAAATAGTAAGAGTTTTAGTTGGAAATAAATGTGATTTTTAAAAGGAAGGA
AGATATGCCACTCCTATGGCTGCTGAATAATTAGCAAAGAGAAATAATATGGAATATATT
GAAGTATCTGCTAAAGAAAACCATAACGTTAGAGAGCTTTTCTAATTAGTAGGTTAACAA
ATATATAAAGAATTAATTGATCCTTAATGA