Identifiers and Description
Gene Model Identifier
TTHERM_01041920
Standard Name
RAB58 (RAB GTPase 58)
Aliases
PreTt01808 | 207.m00052
Description
Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component Molecular Function Biological Process
Domains
( PF00071 ) Ras family
( PF08477 ) Miro-like protein
( PF01926 ) GTPase of unknown function
( PF00025 ) ADP-ribosylation factor family
( TIGR00231 ) small GTP-binding protein domain
( TIGR00073 ) hydrogenase accessory protein HypB
( PF00009 ) Elongation factor Tu GTP binding
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 13%
TetraMine Data
TTHERM_01041920
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_01158.1 3.999751664085691e-132 Ras family protein (219 aa)
Oxytricha Contig15751.0.0.g87 1.0002546821282671e-50 Ras family
WormBase WBGene00004266 6.001950283815408e-48 locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
DictyBase DDB_G0277867 5.000307300873256e-47 rab1B on chromosome: 3 positio
n 743092 to 744234
SGD YFL038C 5.002382393859839e-46 YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor Coeruleus SteCoe_36857 3.873997628687187e-21
General Information
No Data fetched for General Information
Associated Literature
Ref:16933976 : Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,
Sequences
>TTHERM_01041920(coding)ATG AAC GGC GGC GCT AGT GAC GGT ATT GCT AAA GTT AAA ATC CTA ACA TTA GGT GAA TCA GGT GTA GGA AAA TCT TCG TTG TTA CTT AGA TAC AAA GAC GAC AAA TTC GCA GGA AAC TTC GTT ACA ACT CTT GGA GTT GAA TAT AAA TAA AAG CAG ATT CAA ATT GAA AAT ATT CCT CTT ACA GTC TAA GTT TGG GAT ACT GCT GGT TAA GAA CGT TTT AAG ACA ATA ACT CCA AAT TAC TAC AGG TCA GTC GAC GGT GCT CTT CTT GTT TTT GAT ATT TCA GAG TTA GAA ACC TTC GAC AAA ATC GAA TAC TGG ATC TAA GAT CTA CAG AAA GAT GCT GAC CTC ACA AAA GTA ATT ATG GTT TTA GTA GGC AAT AAG AGT GAT TTA GAA GAA AAA AGA AAA GTA GAT TTT TAG ACT GCC CAA AAA AAG GCT TAG GAA TAT TAA ATA GAA TAC ATA GAA ACT TCA GCC AAA ACC AAT TCA AAT GTT GAT CAA GTT TTT GAA ATG ATT GTT AGA AAA GTT ATA GAT AAA AAA GGC GGC ATT GAA AAA TTT AAA GCT CAA TAT TAA GAA TAA ATC GCA TAA AAC CTT AAC TTA AAG AAA GCT AAC ACT TCC AAT GGT GCT TCT GGA TCC AAT AAA AAC AAA TAA AAC AAC AAC AAT GGT GGC TGT TGT TGA >TTHERM_01041920(protein)M N G G A S D G I A K V K I L T L G E S G V G K S S L L L R Y K D D K F A G N F V T T L G V E Y K Q K Q I Q I E N I P L T V Q V W D T A G Q E R F K T I T P N Y Y R S V D G A L L V F D I S E L E T F D K I E Y W I Q D L Q K D A D L T K V I M V L V G N K S D L E E K R K V D F Q T A Q K K A Q E Y Q I E Y I E T S A K T N S N V D Q V F E M I V R K V I D K K G G I E K F K A Q Y Q E Q I A Q N L N L K K A N T S N G A S G S N K N K Q N N N N G G C C >TTHERM_01041920(gene)ATG AAC GGC GGC GCT AGT GAC GGT ATT GCT AAA GTT AAA ATC CTA ACA TTA GGT GAA TCA GGT GTA GGA AAA TCT TCG TTG TTA CTT AGA TAC AAA GAC GAC AAA TTC GCA GGA AAC TTC GTT ACA ACT CTT GGA GTT GAA TAT AAA TAA AAG CAG ATT CAA ATT GAA AAT ATT CCT CTT ACA GTC TAA GTT TGG GAT ACT GCT GGT TAA GAA CGT TTT AAG ACA ATA ACT CCA AAT TAC TAC AGG TCA GTC GAC GGT GCT CTT CTT GTT TTT GAT ATT TCA GAG TTA GAA ACC TTC GAC AAA ATC GAA TAC TGG ATC TAA GAT CTA CAG AAA GAT GCT GAC CTC ACA AAA GTA ATT ATG GTT TTA GTA GGC AAT AAG AGT GAT TTA GAA GAA AAA AGA AAA GTA GAT TTT TAG ACT GCC CAA AAA AAG GCT TAG GAA TAT TAA ATA GAA TAC ATA GAA ACT TCA GCC AAA ACC AAT TCA AAT GTT GAT CAA GTT TTT GAA ATG ATT GTT AGA AAA GTT ATA GAT AAA AAA GGC GGC ATT GAA AAA TTT AAA GCT CAA TAT TAA GAA TAA ATC GCA TAA AAC CTT AAC TTA AAG AAA GCT AAC ACT TCC AAT GGT GCT TCT GGA TCC AAT AAA AAC AAA TAA AAC AAC AAC AAT GGT GGC TGT TGT TGA