Identifiers and Description

Gene Model Identifier

TTHERM_00431230

Standard Name

RAB53 (RAB family protein)

Aliases

PreTt26464 | 48.m00227 | 3831.m01567

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00431230

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_04156.11.999002769139511e-37hypothetical protein (347 aa)
WormBaseWBGene000163443.9983110956465888e-22locus:tag-312 Ras and EF-han
d domain-containing protein ho
molog status:Partially_confi
rmed UniProt:Q22908 protei
n_id:CCD66473.1
OxytrichaContig9955.0.g632.0002795641672355e-21Ras family
SGDYFL038C4.999245259173412e-21YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
DictyBaseDDB_G02763991.9991095569230066e-20rab8B on chromosome: 2 positio
n 6878753 to 6879364
Stentor CoeruleusSteCoe_249850.0000000001026187963170189

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00431230(coding)
ATGAGTCATATTTAAATGAATTAAAATGAATCTAATTAAAAGAAAAATATGAAAATATCA
ATTATGATATGCGGCAACTAAGCAGTAGGAAAAACTTCAATAATTGGATATTATATCAAT
GGTTCCTTTAAAAATAAGTATAATGTTACCCCATAGTGTGAATATAGCATAAAAAATGAA
ACCATTGATTAAGAAAATGTTAATGTTTAAATGATAGATGCACCTGGAATGCTAAATGTA
ATTGATATAACAAGACAACAAATTAGGTCAGCTGATGGATATATATTTGTTTATGATATT
TATGATCACGAATCATTTAAGAATATTGATATATGGGTATAATAGATCTAATAACATAAG
AGTGAGTTCGAAAAGTGTAAGTGCTTGCTAATTGGAAATAAGGTAGATACAAGGAAAAAT
CCTTCTGAAGGTATTAGCTATGAAAAAGGTTAGGAGAAAGCAAAAAACTTTAATATGAAT
TTCTTTGAAACATCAGCTAAAGAAGGAACAAGTATAGTAAGTGCTATTAGAGGTTTAGCA
ATTAATATTTATCACTAAAAAAAGGATTGTATTTTAAAGTAATAGAATATCTTACAGGAG
TAATAAAAAATATCAGGGAGCTCAAATGATTTAAATATTGATGAAAAATTCTTACTCAAT
AATAGTAGAAATCGATAGCCTAAAAAAAATTGTTGGTAGAAATTTAAATCTTGTTTTTGA


>TTHERM_00431230(protein)
MSHIQMNQNESNQKKNMKISIMICGNQAVGKTSIIGYYINGSFKNKYNVTPQCEYSIKNE
TIDQENVNVQMIDAPGMLNVIDITRQQIRSADGYIFVYDIYDHESFKNIDIWVQQIQQHK
SEFEKCKCLLIGNKVDTRKNPSEGISYEKGQEKAKNFNMNFFETSAKEGTSIVSAIRGLA
INIYHQKKDCILKQQNILQEQQKISGSSNDLNIDEKFLLNNSRNRQPKKNCWQKFKSCF


>TTHERM_00431230(gene)
ATGAGTCATATTTAAATGAATTAAAATGAATCTAATTAAAAGAAAAATATGAAAATATCA
ATTATGATATGCGGCAACTAAGCAGTAGGAAAAACTTCAATAATTGGATATTATATCAAT
GGTTCCTTTAAAAATAAGTATAATGTTACCCCATAGTGTGAATATAGCATAAAAAATGAA
ACCATTGATTAAGAAAATGTTAATGTTTAAATGATAGATGCACCTGGAATGCTAAATGTA
ATTGATATAACAAGACAACAAATTAGGTCAGCTGATGGATATATATTTGTTTATGATATT
TATGATCACGAATCATTTAAGAATATTGATATATGGGTATAATAGATCTAATAACATAAG
AGTGAGTTCGAAAAGTGTAAGTGCTTGCTAATTGGAAATAAGGTAGATACAAGGAAAAAT
CCTTCTGAAGGTATTAGCTATGAAAAAGGTTAGGAGAAAGCAAAAAACTTTAATATGAAT
TTCTTTGAAACATCAGCTAAAGAAGGAACAAGTATAGTAAGTGCTATTAGAGGTTTAGCA
ATTAATATTTATCACTAAAAAAAGGATTGTATTTTAAAGTAATAGAATATCTTACAGGAG
TAATAAAAAATATCAGGGAGCTCAAATGATTTAAATATTGATGAAAAATTCTTACTCAAT
AATAGTAGAAATCGATAGCCTAAAAAAAATTGTTGGTAGAAATTTAAATCTTGTTTTTGA