Identifiers and Description

Gene Model Identifier

TTHERM_00207260

Standard Name

RAB45 (RAB GTPase 45)

Aliases

PreTt13802 | 17.m00409

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12%

TetraMine Data

TTHERM_00207260

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_41009.10.0000000000005000841553255702hypothetical protein (178 aa)
SGDYLR262C0.000000000010004361180063202YPT6 Rab family GTPase, Ras-li
ke GTP binding protein involve
d in the secretory pathway, re
quired for fusion of endosome-
derived vesicles with the late
Golgi, maturation of the vacu
olar carboxypeptidase Y; has s
imilarity to the human GTPase,
Rab6
DictyBaseDDB_G02701260.00000000007999955850159168rasY on chromosome: 1 position
4283626 to 4284369
WormBaseWBGene000042690.00000000030007160092483236locus:rab-6.1 Ras-related pr
otein Rab-6.1 status:Confirm
ed UniProt:P34213 protein_
id:CAA77590.1
OxytrichaContig22448.0.g390.00000000030007160092483236Ras family

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00207260(coding)
ATGGATAAACTGCTTAATCAATCTAATTAAATAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTTGAAAAGCCATATAATTGGTACTTAGATTTTAAGAATAGC
AGCAATAATAAATATGTAGTTTTATCTTTAATTGGAAATAAATGTGATTTGCAGGAAGAA
CATAGGTAGGTTTCTTATCAAGAGGCTTAACAGCTTGCTTAATCCTTGGGAATGGTCTTC
TTTGAAATTTCAGCTAAAACTGGTTATCATGTAAACGAGTTGTTTGATTTTATAATTACT
TAGGCTCAAAATATTGCTTGA


>TTHERM_00207260(protein)
MDKLLNQSNQIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKPYNWYLDFKNS
SNNKYVVLSLIGNKCDLQEEHRQVSYQEAQQLAQSLGMVFFEISAKTGYHVNELFDFIIT
QAQNIA


>TTHERM_00207260(gene)
ATGGATAAACTGCTTAATCAATCTAATTAAATAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTTGAAAAGCGTAACATTATTCTTTAAATCAAACATTTTTAA
GTTTTTTTATTAGTGGAAAAGATGAAATTAATTTATACATATGTGAATTTGATTCAAATG
AAAGAATGTACTACATAAAATAATTTTTTTATAGGACTTCTTCATTTATAATAATTTGTT
ATGATGTTACTAATAGATAAAGTTTTTAAAAAGCATATAATTGGTACTTAGATTTTAAGA
ATAGCAGCAATAATAAATATGTAGTTTTATCTTTAATTGGAAATAAATGTGATTTGCAGG
AAGAACATAGGTAGGTTTCTTATCAAGAGGCTTAACAGCTTGCTTAATCCTTGGGAATGG
TCTTCTTTGAAATTTCAGCTAAAACTGGTTATCATGTAAACGAGTTGTTTGATTTTATAA
TTACTTAGGCTCAAAATATTGCTTGA