Identifiers and Description

Gene Model Identifier

TTHERM_00558520

Standard Name

RAB44

Aliases

PreTt07948 | 73.m00192 | 3735.m00086

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00558520

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14417.16.999281070199524e-80small GTP-binding protein doma
in-containing protein (195 aa)
WormBaseWBGene000042672.9995979253168707e-35locus:rab-3 Ras-related prot
ein Rab-3 status:Confirmed
UniProt:Q94986 protein_id:C
CD65021.1
OxytrichaContig22392.0.g292.0003218023735366e-33Ras family
DictyBaseDDB_G02800435.997292208647762e-33rab8A on chromosome: 3 positio
n 3266503 to 3267523
SGDYFL038C2.998800627344286e-26YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor CoeruleusSteCoe_7322.3195228302435696e-16

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00558520(coding)
ATGTTGAAACTTGTTCTTGTTGGTGATTAAAAAGTTGGAAAATTAAGTTTAAATTTGAGA
TATTCTTTGAATGCTGAACCAGGCTCTAATGCTTGCGATTATCCATTAGACTATTATAGC
AGGAATATAACCATAGGCTAAAAGGACATTGAAATTCAAACTTGGCACTATAATCATGAA
GTGAGTAGATATATTTAATAAGCCTTCATTTATAGGAAAGCTCAAGGGATAATAATATGC
TATGCTATCGATGATAGATAGTCTTTTAATAATGTATAAAAATGGATCGATTAAATAAAG
CAGTATAGTAGAGAAGACATAGAATTAATATTAATTGGAACAAAATGTGATTAAGAGGAT
TAAAGATAAGTTAGTTATAAAGAAGGAAAATAATTAGCCGACTAATTAGGGATATTATTT
TTCGAAACTTCATCATAAAAAGACATAAACGTAAAGGAAGCTTTCAATGTAATAATTAAT
AACATAATAAATAATAAAGATCTTTAAAAAGAAATTCTTAACTCAAGCCATCAAAGCTTA
AGCAGCAAAACAAGCACTTAAAGTTAGTTTTGCTATTCAAGCTGA


>TTHERM_00558520(protein)
MLKLVLVGDQKVGKLSLNLRYSLNAEPGSNACDYPLDYYSRNITIGQKDIEIQTWHYNHE
VSRYIQQAFIYRKAQGIIICYAIDDRQSFNNVQKWIDQIKQYSREDIELILIGTKCDQED
QRQVSYKEGKQLADQLGILFFETSSQKDINVKEAFNVIINNIINNKDLQKEILNSSHQSL
SSKTSTQSQFCYSS


>TTHERM_00558520(gene)
ATGTTGAAACTTGTTCTTGTTGGTGATTAAAAAGTTGGAAAATTAAGTTTAAATTTGAGA
TATTCTTTGAATGCTGAACCAGGCTCTAATGCTTGCGATTATCGTAAATATATATTTAAC
TCTTTGATTTAGCAGCTTTACTATTGATTCTTTCAAGATTAAATTAATTCTATTTTAGCT
TATTTATTTATTTATTTTACTTTGAAAGGCAAAACAAAGAAATTTTGTATTGATTTTTGT
TTTAATATTAAATAAAGCATTAGACTATTATAGCAGGAATATAACCATAGGCTAAAAGGA
CATTGAAATTCAAACTTGGCACTATAATCATGAAGTGAGTAGATATATTTAATAAGCCTT
CATTTATAGGAAAGCTCAAGGGATAATAATATGCTATGCTATCGATGATAGATAGTCTTT
TAATAATGTATAAAAATGGATCGATTAAATAAAGCAGTATAGTAGAGAAGACATAGAATT
AATATTAATTGGAACAAAATGTGATTAAGAGGATTAAAGATAAGTTAGTTATAAAGAAGG
AAAATAATTAGCCGACTAATTAGGGATATTATTTTTCGAAACTTCATCATAAAAAGACAT
AAACGTAAAGGAAGCTTTCAATGTAATAATTAATAACATAATAAATAATAAAGATCTTTA
AAAAGAAATTCTTAACTCAAGCCATCAAAGCTTAAGCAGCAAAACAAGCACTTAAAGTTA
GTTTTGCTATTCAAGCTGA