Identifiers and Description

Gene Model Identifier

TTHERM_00664060

Standard Name

RAB41 (RAB family protein)

Aliases

PreTt23853 | 98.m00196 | 3736.m00094

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF00009 ) Elongation factor Tu GTP binding
  • ( TIGR00650 ) GTP-binding conserved hypothetical protein

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00664060

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_17189.12.0000211193600847e-137Ras family protein (238 aa)
OxytrichaContig15751.0.0.g871.0001801308941382e-55Ras family
DictyBaseDDB_G02717369.998397555368434e-52rabC on chromosome: 2 position
718547 to 719569
WormBaseWBGene000042668.003782782428492e-46locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
SGDYFL038C1.000159011384939e-43YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor CoeruleusSteCoe_142131.9287498479639178e-22

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00664060(coding)
ATGTAAAAAGAAAATAGTGGGGTTTATTCAAATTAGCTTTAAGCTGGAGTTTTTAATTCC
CCACACACGAAGATTGACTTAGTTTTTAAAATAATTTTAATAGGACAGCAAAATGTAGGC
AAATCTTCCATTTTAAATTAGTACGTAGATAGAGAATTTGCAGAACATTATATGTCAACA
ATAGGTGTAGATTTTAGATTAAAAACAATTAAAACAAGTTCTGGTAAAATAGTGAAGCTA
CAAATTTGGGATACTGCTGGATAAGAAAGATTTGCAGCTTTGACTAATTCACATTATAAA
GGAGCGCATTCTTGCATTTGTGTCTATGATATAACTAATCCTAAGAGCTTAGCATCAGCA
GAATAATATTTATAGACAACAATTAACCAACATGGGATAGATTCAGATTTAATTTATCTG
ATAGGCAACAAATCAGATTTAGAAGATTAAAGGAAGATTAGCGAAAAAGAAGGAAAAGAT
TTAAGTTATAAATACGGAGTAAATTTCTTAGAAACAAGTGCAAAAAATTACTTAAATATA
GAAGAGCTTTTTGATTAGATGGTTGAGCACTTAGTGAGTCTAATTACTAACCCTCAAATA
CCAAAAAAACTTTCATAGTTAAATAATGTCAAAATAACTAGCAAAGATATTATGATTAAA
TAGTAAGAAGGTAATAATGAAGTTTAAAAGAAAGGCTGCTGTTGA


>TTHERM_00664060(protein)
MQKENSGVYSNQLQAGVFNSPHTKIDLVFKIILIGQQNVGKSSILNQYVDREFAEHYMST
IGVDFRLKTIKTSSGKIVKLQIWDTAGQERFAALTNSHYKGAHSCICVYDITNPKSLASA
EQYLQTTINQHGIDSDLIYLIGNKSDLEDQRKISEKEGKDLSYKYGVNFLETSAKNYLNI
EELFDQMVEHLVSLITNPQIPKKLSQLNNVKITSKDIMIKQQEGNNEVQKKGCC


>TTHERM_00664060(gene)
ATGTAAAAAGAAAATAGTGGGGTTTATTCAAATTAGCTTTAAGCTGGAGTTTTTAATTCC
CCACACACGAAGATTGACTTAGTTTTTAAAATAATTTTAATAGGACAGCAAAATGTAGGC
AAATCTTCCATTTTAAATTAGTACGTAGATAGAGAATTTGCAGAACATTATATGTCAACA
ATAGGTGTAGATTTTAGATTAAAAACAATTAAAACAAGTTCTGGTAAAATAGTGAAGCTA
CAAATTTGGGATACTGCTGGATAAGAAAGATTTGCAGCTTTGACTAATTCACATTATAAA
GGAGCGCATTCTTGCATTTGTGTCTATGATATAACTAATCCTAAGAGCTTAGCATCAGCA
GAATAATATTTATAGACAACAATTAACCAACATGGGATAGATTCAGATTTAATTTATCTG
ATAGGCAACAAATCAGATTTAGAAGATTAAAGGAAGATTAGCGAAAAAGAAGGAAAAGAT
TTAAGTTATAAATACGGAGTAAATTTCTTAGAAACAAGTGCAAAAAATTACTTAAATATA
GAAGAGCTTTTTGATTAGATGGTTGAGCACTTAGTGAGTCTAATTACTAACCCTCAAATA
CCAAAAAAACTTTCATAGTTAAATAATGTCAAAATAACTAGCAAAGATATTATGATTAAA
TAGTAAGAAGGTAATAATGAAGTTTAAAAGAAAGGCTGCTGTTGA