Identifiers and Description

Gene Model Identifier

TTHERM_00295030

Standard Name

RAB37 (RAB)

Aliases

PreTt15613 | 27.m00273 | 3692.m00076

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF00735 ) Cell division protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF00009 ) Elongation factor Tu GTP binding

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 17.3%

TetraMine Data

TTHERM_00295030

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_08766.18.002072745601587e-114Ras family protein (210 aa)
DictyBaseDDB_G02763993.001129784945559e-41rab8B on chromosome: 2 positio
n 6878753 to 6879364
WormBaseWBGene000042732.998863950472602e-38locus:rab-10 status:Confirme
d UniProt:Q94148 protein_i
d:CCD70773.1
SGDYFL038C3.9997566980151843e-38YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
OxytrichaContig15751.0.0.g871.999002769139511e-37Ras family
Stentor CoeruleusSteCoe_249851.5628821893349888e-18

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00295030(coding)
ATGAAGTCTTAGACTAAAAAAGTTAAACTTTTGATATTAGGAGAATCTTCTGTAGGGAAA
ACTGCTCTATTAAATAGATTTGCTCAAAATGAATTTATACCAACAAGCTCATCAACAGGA
ATGGATTATGCAATTAAAATGATAGAAATTGATAATAAAAAAGTTTAACTATCTGTCTGG
GATACAGCAGGTTAAGAAAGATATAGAAGCATCACATTTAATCTTTACAAAGACTCATAG
GGAATTCTTTTAGTTTTTGATTTAACTAACGCAAAAACATTTTAAACTTTAGAAAAATGG
ATGTAGCTCATTAAAGCTAATATAAATGAAGGCTTTTAAATTGCCTTAATAGGAACGAAA
TGTGATTTAACAGATTAAATTGTAGTAAATAGGGATATGATCAATGAATTTTTAGATAAA
TATGATTTTTAGTTTGAATATTTTGAAACAAGCTCTCTTACAAATATAAATATAAGTGAA
TGCTTTATTCATCTTGCAACAAAGGTTTTTAGAGCAAATGAGGAGTTGTATTTAACTTTG
ATTGCTTAAGGAATAGATCCAGAAGGTAATACAGCCTCAATCCTATTAAATGGTAATTAA
CATAATAAAAAAAAGAATAAAGAAAAAGATAAAAAATGTTGTGAATGA


>TTHERM_00295030(protein)
MKSQTKKVKLLILGESSVGKTALLNRFAQNEFIPTSSSTGMDYAIKMIEIDNKKVQLSVW
DTAGQERYRSITFNLYKDSQGILLVFDLTNAKTFQTLEKWMQLIKANINEGFQIALIGTK
CDLTDQIVVNRDMINEFLDKYDFQFEYFETSSLTNINISECFIHLATKVFRANEELYLTL
IAQGIDPEGNTASILLNGNQHNKKKNKEKDKKCCE


>TTHERM_00295030(gene)
ATGAAGTCTTAGACTAAAAAAGTTAAACTTTTGATATTAGGAGAATCTTCTGTAGGGAAA
ACTGCTCTATTAAATAGATTTGCTCAAAATGAATTTATACCAACAAGCTCATCAACAGGT
AAATTTTCATTATTGAATCAAATTAAATCATGAAAATAAAACTAATTCTCTAAACAACTT
AAGGAATGGATTATGCAATTAAAATGATAGAAATTGATAATAAAAAAGTTTAACTATCTG
TCTGGGATACAGCAGGTTAAGAAAGATATAGAAGCATCACATTTAATCTTTACAAAGACT
CATAGGGAATTCTTTTAGTTTTTGATTTAACTAACGCAAAAACATTTTAAACTTTAGAAA
AATGGATGTAGCTCATTAAAGCTAATATAAATGAAGGCTTTTAAATTGCCTTAATAGGAA
CGAAATGTGATTTAACAGATTAAATTGTAGTAAATAGGGATATGATCAATGAATTTTTAG
ATAAATATGATTTTTAGTTTGAATATTTTGAAACAAGCTCTCTTACAAATATAAATATAA
GTGAATGCTTTATTCATCTTGCAACAAAGGTTTTTAGAGCAAATGAGGAGTTGTATTTAA
CTTTGATTGCTTAAGGAATAGATCCAGAAGGTAATACAGCCTCAATCCTATTAAATGGTA
ATTAACATAATAAAAAAAAGAATAAAGAAAAAGATAAAAAATGTTGTGAATGA