Identifiers and Description

Gene Model Identifier

TTHERM_00723170

Standard Name

RAB36 (RAB GTPase 36)

Aliases

PreTt18077 | 116.m00102 | 3671.m00026

Description

Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13%

TetraMine Data

TTHERM_00723170

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14793.12.9990203769197855e-115Ras family protein (224 aa)
SGDYFL038C1.9993430003514377e-39YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
DictyBaseDDB_G02800438.003017249547689e-39rab8A on chromosome: 3 positio
n 3266503 to 3267523
OxytrichaContig22392.0.g294.998978211117678e-38Ras family
WormBaseWBGene000042669.99648502569394e-38locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
Stentor CoeruleusSteCoe_249852.1151310375910805e-19

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00723170(coding)
ATGGCAGCATTATAAAAAAAGCAATCCATAAACTGTAAAGTGTTAGTTTTAGGTAAATCA
GGAGTTGGAAAGAGTTATATTCTTCTTTAATATACAGCTCCTCCTCAAGAAATAGTCTAG
ATGCCAAAATTAACAACAGTTGGTGTAGATTATAAATATGGGACTGAAAAGATTGAAGAT
ACAGAAGTTAAAATGTCAATATGGGATACTGCTGGCCAAGAGAAATATCGCCCTATTATT
TAGACTTATTTTAAGAATTCAAAGGCAGCAATTCTTGTGTTTGATTTAACAGATAAGTAA
TCCTTGTAAGATGTGAGATACTGGCTAAGAGAAGTAAAATTGTAATGTGGTAAGGATGTA
GCAAAAATTTTAGTAGGAAATAAATGTGATTTGCCTCACGAATAGCCTGATTAAGCTTTG
ATATAAGAATATTGCGAAGAATTTCAAATGGAATATATAGAATCAAGTGCTTTATAAAAG
ATTAATATTTAAGAAATATTTGTAAAGTTAGCTAAAAAGATATATTAATAGCACAAAGCA
AGTATTCCATAAAATCAATTAAAATAAAATAGTTTACCAGCAAATGAAGCTTAAAATTAA
AATTCTACATCATCAAATAAATAAATAAGTTTAAAAAATTCTAAACCAAAATAGAAAAAA
GAAAATGATGGGTGTTGCTGA


>TTHERM_00723170(protein)
MAALQKKQSINCKVLVLGKSGVGKSYILLQYTAPPQEIVQMPKLTTVGVDYKYGTEKIED
TEVKMSIWDTAGQEKYRPIIQTYFKNSKAAILVFDLTDKQSLQDVRYWLREVKLQCGKDV
AKILVGNKCDLPHEQPDQALIQEYCEEFQMEYIESSALQKINIQEIFVKLAKKIYQQHKA
SIPQNQLKQNSLPANEAQNQNSTSSNKQISLKNSKPKQKKENDGCC


>TTHERM_00723170(gene)
ATGGCAGCATTATAAAAAAAGCAATCCATAAACTGTAAAGTGTTAGTTTTAGGTAAATCA
GGAGTTGGAAAGAGTTATATTCTTCTTTAATATACAGCTCCTCCTCAAGAAATAGTCTAG
ATGCCAAAATTAACAAGTAAAATTTGAAAATTTAAAATGATTATTTATAAAATGGAAATC
TGAGATAATCAGATTAAACTGTAAAATAATAATTTTTAATTTCTTTTTTCCATAATTAAA
AAAATTACCATCTAATTGAAAAATTAAGCTATTTTTATAATAAGCAGTTGGTGTAGATTA
TAAATATGGGACTGAAAAGATTGAAGATACAGAAGTTAAAATGTCAATATGGGATACTGC
TGGCCAAGAGAAATATCGCCCTATTATTTAGACTTATTTTAAGAATTCAAAGGCAGCAAT
TCTTGTGTTTGATTTAACAGATAAGTAATCCTTGTAAGATGTGAGATACTGGCTAAGAGA
AGTAAAATTGTAATGTGGTAAGGATGTAGCAAAAATTTTAGTAGGAAATAAATGTGATTT
GCCTCACGAATAGCCTGATTAAGCTTTGATATAAGAATATTGCGAAGAATTTCAAATGGA
ATATATAGAATCAAGTGCTTTATAAAAGATTAATATTTAAGAAATATTTGTAAAGTTAGC
TAAAAAGATATATTAATAGCACAAAGCAAGTATTCCATAAAATCAATTAAAATAAAATAG
TTTACCAGCAAATGAAGCTTAAAATTAAAATTCTACATCATCAAATAAATAAATAAGTTT
AAAAAATTCTAAACCAAAATAGAAAAAAGAAAATGATGGGTGTTGCTGA