Identifiers and Description

Gene Model Identifier

TTHERM_00557870

Standard Name

RAB2F

Aliases

PreTt07885 | 73.m00129 | 3735.m00023

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.1%

TetraMine Data

TTHERM_00557870

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14352.12.0005106264580874e-134Ras family protein (236 aa)
WormBaseWBGene000068337.003229617538552e-69locus:unc-108 status:Confirm
ed UniProt:O01577 protein_
id:CCD66422.1
OxytrichaContig22591.0.g1123.0005221502158484e-68Ras family
DictyBaseDDB_G02922687.002037867398653e-67rab2A on chromosome: 6 positio
n 1422661 to 1423817
SGDYGL210W2.000555387360374e-52YPT32 Rab family GTPase, very
similar to Ypt31p; involved in
the exocytic pathway; mediate
s intra-Golgi traffic or the b
udding of post-Golgi vesicles
from the trans-Golgi
Stentor CoeruleusSteCoe_86115.380186160021138e-32

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00557870(coding)
ATGAATCAATATGATTATCTGTTTAAATTTATTATGATAGGAGATACAGGTGTAGGAAAA
TCGTGCATGTTACTGAGATTTGTAGATGATAGATTTAGGGAAGATTATGATGCAACTATT
GGAGTAGAATTTGGTTCTAAAATTATAGATGTTGCCAATTTAGCTATAAAGATTTAGATT
TGGGATACAGCAGGATAGGAGTCATTTAGATCAATTACACGCTCCTATTATAAAGGTGCA
ATAGGTGCTGTAGTTGTTTTTGACATTACAAAAAGAAGTTCTTTTGATAATTTACCCAAG
TGGTTGCATGATATAAAAGAATAAGGAAAGGAAGAAACTTTTGTGTTAATAGTGGGAAAT
AAGTTTGATTAAATGTTGCAGAGAGAAGTATCTTAACAGGAAGCATCAGAATTTGCAGAA
TAATAAGGTTTTAATTATGTTGAAGTTTCTGCAAAAAGCGGTGATAATGTGAATAAAATT
TTTAACATTATGGCCTAAGAAATTTTAAGTAAAATACAGTAAAATCTAATTGACTTCACA
AATGAAAGTAGTGGCATCAAAGTTGGTTCAAAGAAAACTGCTCCACTAAATGATTATAAA
AATAAATAATAAAATAAAGATTAGAATTTATTGTAAAAATAAAAAAAAGATATAGAAAAT
AATGGCGGTGATAGTTAATAAGAATAGTAATCTTATTGTCAATGCTGA


>TTHERM_00557870(protein)
MNQYDYLFKFIMIGDTGVGKSCMLLRFVDDRFREDYDATIGVEFGSKIIDVANLAIKIQI
WDTAGQESFRSITRSYYKGAIGAVVVFDITKRSSFDNLPKWLHDIKEQGKEETFVLIVGN
KFDQMLQREVSQQEASEFAEQQGFNYVEVSAKSGDNVNKIFNIMAQEILSKIQQNLIDFT
NESSGIKVGSKKTAPLNDYKNKQQNKDQNLLQKQKKDIENNGGDSQQEQQSYCQC


>TTHERM_00557870(gene)
ATGAATCAATATGATTATCTGTTTAAATTTATTATGATAGGAGATACAGGTATTAAGATT
AAATATATTAAATAGCTACATATTATATAGCAATAATAGTTAGAAGTGAATAGCAATTTA
ATTGTTACAGATTCATCTGAAATACTTATTATATATCTATCTATCAATCAGATTTTTACT
TATTAAAAATTATTAAAAGGTGTAGGAAAATCGTGCATGTTACTGAGATTTGTAGATGAT
AGATTTAGGGAAGATTATGATGCAACTATTGGAGTAGAATTTGGTTCTAAAATTATAGAT
GTTGCCAATTTAGCTATAAAGATTTAGATTTGGGATACAGTAAAATTAAGTTTAAGCATT
CTTTCTTTCATTCAAAATTTCAACTAAGCTTACAAAAATTTCAAAATATTTAAAGGCAGG
ATAGGAGTCATTTAGATCAATTACACGCTCCTATTATAAAGGGTATTCTTATCTAAATAA
AATATTACCTACATATTTAATTTTAATAAAAGTGCAATAGGTGCTGTAGTTGTTTTTGAC
ATTACAAAAAGAAGTTCTTTTGATAATTTACCCAAGTGGTTGCATGATATAAAAGAATAA
GGAAAGGAAGAAACTTTTGTGTTAATAGTGGGAAATAAGTTTGATTAAATGTTGCAGTAA
TAAATTAATTTTAGTTATGGATTGAATTAAGGCAAATTAGTTGTTGAATATTTCAGAATA
TATTCAATTGTATTCCTGATTATTTAAAATTAAATACTAAACAAACAGTCTGATTGATAT
ATTTATTTTCTCCTTTAAATCAGCTTATTAAAGATTTTATGCTAATTAAAATAAAATAAA
ACATTATTTTTTTAAATTACAGGAGAGAAGTATCTTAACAGGAAGCATCAGAATTTGCAG
AATAATAAGGTTTTAATTATGTTGAAGTTTCTGCAAAAAGCGGTGATAATGTGAATAAAA
TTTTTAACATTATGGCCTAAGAAATTTTAAGTAAAATACAGTAAAATCTAATTGACTTCA
CAAATGAAGTAAGTATTTCTTTTTGATAGCTAATGTAAATAATGAATTGATTTATTTTAA
ATAGAGTAGTGGCATCAAAGTTGGTTCAAAGAAAACTGCTCCACTAAATGATTATAAAAA
TAAATAATAAAATAAAGATTAGAATTTATTGTAAAAATAAAAAAAAGATATAGAAAATAA
TGGCGGTGATAGTTAATAAGAATAGTAATCTTATTGTCAATGCTGA