Identifiers and Description

Gene Model Identifier

TTHERM_00726080

Standard Name

RAB2C (RAB GTPase 2C)

Aliases

PreTt21874 | 117.m00126

Description

Ras family protein; Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 16.4%

TetraMine Data

TTHERM_00726080

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_04599.16.999872280442742e-128Ras family protein (227 aa)
WormBaseWBGene000068334.001371804839974e-78locus:unc-108 status:Confirm
ed UniProt:O01577 protein_
id:CCD66422.1
OxytrichaContig22591.0.g1122.0006398763136557e-76Ras family
DictyBaseDDB_G02922681.000296925633081e-74rab2A on chromosome: 6 positio
n 1422661 to 1423817
SGDYER031C1.999576471039937e-58YPT31 Rab family GTPase, very
similar to Ypt32p; involved in
the exocytic pathway; mediate
s intra-Golgi traffic or the b
udding of post-Golgi vesicles
from the trans-Golgi
Stentor CoeruleusSteCoe_102483.6251409191435593e-34

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00726080(coding)
ATGAGTTCTTATTATTATTTATTTAAGTTTATTGTCATAGGCGATTCAGGTGTAGGAAAA
TCTTGCTTAGTACTTCAATTTACAGAAAATTATATTAGAAAAAACCACGATGTAACTATT
GGAGTTGAATTTGGAGTTAAAATTGTGTAGATTGATGGAAAAAATATTAAGCTTTAAATA
TGGGATACTGCCGGATAAGAAAATTTTAGGTCTCTTACAAGAGCTTACTATAGAACAGCA
ATAGGAGCAATAGTTGTGTATGATATATCAAGGAGAGATAGTTTCTTACATATAAATGAT
TGGATAAAAGAGATGAAATCGAATGGTAATCAAAACATGGTTGTTCTATTAATAGGCAAT
AAAAAAGATAAAGAATCTCAGAGATAAGTTTAAACTGAAGAAGGTCAAGCTGTTGCAAAT
GAAAATGGGTTTTTATTTTTTGAAACATCAGCAAGAGATTCAATTAATGTAGATGAAGCA
TTTACTAAACTTGCTGAATAAATCACTAGAAAAGTTGATTCAGGAGAAATACCAATAGGA
GATAACCAAACTATAAAAATAGGAGCTGAGTACTCCTTTTATTAAAGTAAAAGTAGAGAT
TAAACTGAAGAAGGAGGAAATGTTAATTTAAGTAAACAACAAAAAGATTAAAATAAGTCT
TCATGTTGCTGA


>TTHERM_00726080(protein)
MSSYYYLFKFIVIGDSGVGKSCLVLQFTENYIRKNHDVTIGVEFGVKIVQIDGKNIKLQI
WDTAGQENFRSLTRAYYRTAIGAIVVYDISRRDSFLHINDWIKEMKSNGNQNMVVLLIGN
KKDKESQRQVQTEEGQAVANENGFLFFETSARDSINVDEAFTKLAEQITRKVDSGEIPIG
DNQTIKIGAEYSFYQSKSRDQTEEGGNVNLSKQQKDQNKSSCC


>TTHERM_00726080(gene)
ATGAGTTCTTATTATTATTTATTTAAGTTTATTGTCATAGGCGATTCAGGTAAAATTATT
TTTCTTCCAAATTTATTGATATAACTAAAATAAGGAGTATGAATTTAAGATCATGTTGAT
TTATTAAAAGGTGTAGGAAAATCTTGCTTAGTACTTCAATTTACAGAAAATTATATTAGA
AAAAACCACGATGTAACTATTGGAGTTGAATTTGGAGTTAAAATTGTGTAGATTGATGGA
AAAAATATTAAGCTTTAAATATGGGATACTGTAAAATATTTCTTTTTGGAAAAAAAATAT
TTAAAAATTCATAATTAGTTTAGCAATTGTGAATTATAAAATTAATTAATAGGCCGGATA
AGAAAATTTTAGGTCTCTTACAAGAGCTTACTATAGAACAGCAATAGGAGCAATAGTTGT
GTATGATATATCAAGGTAGAATTGTATTTATTAATCAAATCTATTACTCTTGTTAAATAT
AAAATATATTTTTATTAAAGGAGAGATAGTTTCTTACATATAAATGATTGGATAAAAGAG
ATGAAATCGAATGGTAATCAAAACATGGTTGTTCTATTAATAGGCAATAAAAAAGATAAA
GAATCTCAGTAAAACTAATCAAAACAAAATAAAATAATTAAAACGCTGATTTTTAAAAAA
CAGGAGATAAGTTTAAACTGAAGAAGGTCAAGCTGTTGCAAATGAAAATGGGTTTTTATT
TTTTGAAACATCAGCAAGAGATTCAATTAATGTAGATGAAGTAGGATAACTTTAAATATT
TAATTTTACCTAATTATTATCAATTTTTAAAAGGCATTTACTAAACTTGCTGAATAAATC
ACTAGAAAAGTTGATTCAGGAGAAATACCAATAGGAGATGTAAAAAATAATAAATAATCT
AAATTCTACAAATAGTTAAAAAATTTTATTAAATAATAGAACCAAACTATAAAAATAGGA
GCTGAGTACTCCTTTTATTAAAGTAAAAGTAGAGATTAAACTGAAGAAGGAGGAAATGTT
AATTTAAGTAAACAACAAAAAGATTAAAATAAGTCTTCATGTTGCTGA