Identifiers and Description

Gene Model Identifier

TTHERM_00670290

Standard Name

RAB2B (RAB GTPase 2B)

Aliases

PreTt01053 | 100.m00114 | 3731.m00024

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00071 ) Ras family
• ( PF08477 ) Miro-like protein
• ( PF01926 ) GTPase of unknown function
• ( PF00025 ) ADP-ribosylation factor family
• ( TIGR00231 ) small GTP-binding protein domain
• ( PF03029 ) Conserved hypothetical ATP binding protein

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.2%

TetraMine Data

TTHERM_00670290

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_16443.1	1.9991914687114462e-138	Ras family protein (216 aa)
WormBase	WBGene00006833	1.9996609186508915e-82	locus:unc-108 status:Confirm ed UniProt:O01577 protein_ id:CCD66422.1
Oxytricha	Contig22591.0.g112	3.001096210761825e-82	Ras family
DictyBase	DDB_G0292268	2.9993408039826107e-81	rab2A on chromosome: 6 positio n 1422661 to 1423817
SGD	YGL210W	2.9989272749380808e-50	YPT32 Rab family GTPase, very similar to Ypt31p; involved in the exocytic pathway; mediate s intra-Golgi traffic or the b udding of post-Golgi vesicles from the trans-Golgi
Stentor Coeruleus	SteCoe_25845	1.8048513878454153e-35

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00670290(coding)
ATGTCATATGCTTATTTACTCAAATATATTGTTATTGGCGATACTGGTGTAGGAAAATCT
AGTCTCATTATGCAGTTTACATAAGAAGTATTTAGAGATAAACATGATATAACAGTAGGA
GTAGAATTTGGAGCCAAAGTTATAAAAATAAATGGATAAAGTGTAAAATTATAAATTTGG
GATACAGCAGGATAAGAAGATTTCAGAAGCATAGTACGTTCTTATTATAGATCTACTGCA
GGGGCTCTTGTAGTATATGATATAACTAGGAGAGATACATTTAAGCATATAACTAGATGG
GTAGAAGAAGCGACTAACAATGGGAATAGCACCTTAACCTTTATGCTTATTGGAAATAAA
TCTGACTTGGAAAGCTAGAGAGAAGTTAGTTATGAAGAAGGTTTATAGCTAGCTAAAGAA
CATAATATGCTATTTATAGAGACTTCAGCAAAGACCAAGCATAACGTAGAACAGACATTT
TGCTAGACAGCAGTAACTATCTTAGATAAAGTAAAAAATGGAGAAATAGAAGCAACTGCA
AATGGCTCTTCAGGTGTTAAATTAGGAGAAGTATAAAAGTAGGATAATATTATTTTAGAT
AGTAACAGCGCCAAGAATAATAATAATGGTAACAAAAAAAAGAAAAACTGTTGCTGA

>TTHERM_00670290(protein)
MSYAYLLKYIVIGDTGVGKSSLIMQFTQEVFRDKHDITVGVEFGAKVIKINGQSVKLQIW
DTAGQEDFRSIVRSYYRSTAGALVVYDITRRDTFKHITRWVEEATNNGNSTLTFMLIGNK
SDLESQREVSYEEGLQLAKEHNMLFIETSAKTKHNVEQTFCQTAVTILDKVKNGEIEATA
NGSSGVKLGEVQKQDNIILDSNSAKNNNNGNKKKKNCC

>TTHERM_00670290(gene)
ATGTCATATGCTTATTTACTCAAATATATTGTTATTGGCGATACTGTAATTTTTTAAGAA
TTAGCTTTTATTTCAGATTCTAAATAAAGTTCAAATAGCATACCTTTATCTTTTTTGCAT
AATTCAGATAAAAGCTAATATTTAGTAAGCAAATATGAAATATATTTTATATGATAAAGG
GTGTAGGAAAATCTAGTCTCATTATGCAGTTTACATAAGAAGTATTTAGAGATAAACATG
ATATAACAGTAGGAGTAGAATTTGGAGCCAAAGTTATAAAAATAAATGGATAAAGTGTAA
AATTATAAATTTGGGATACAGCAGGATAAGAAGATTTCAGAAGCATAGTACGTTCTTATT
ATAGATCTACTGCAGGGGCTCTTGTAGTATATGATATAACTAGGTATATTAATTAAAGAA
TACTTGCAATACTTTCAATTATGATAAACCTATTCATTCATTTTGATATAATGCTTTTTA
AATTATTCATAGGAGAGATACATTTAAGCATATAACTAGATGGGTAGAAGAAGCGACTAA
CAATGGGAATAGCACCTTAACCTTTATGCTTATTGGAAATAAATCTGACTTGGAAAGCTA
GTAAATTTAATTTGTATTTAAGTAAGTTATATAACATCGTATTTTATTCATTTTAGGAGA
GAAGTTAGTTATGAAGAAGGTTTATAGCTAGCTAAAGAACATAATATGCTATTTATAGAG
ACTTCAGCAAAGACCAAGCATAACGTAGAACAGGTATTACTATATTAATTATAAGCAAAG
TTAATGTTTATCTTAATAAAAGACATTTTGCTAGACAGCAGTAACTATCTTAGATAAAGT
AAAAAATGGAGAAATAGAAGCAACTGCAAATGGCTCTTCAGGTGTTAAATTAGGAGAAGT
ATAAAAGTAGGATAATATTATTTTAGATAGTAACAGCGCCAAGAATAATAATAATGGTAA
CAAAAAAAAGAAAAACTGTTGCTGA