Identifiers and Description

Gene Model Identifier

TTHERM_00433430

Standard Name

RAB1B (RAB GTPase 1B)

Aliases

PreTt26486 | 48.m00249 | 3831.m01587

Description

Rab I family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.6%

TetraMine Data

TTHERM_00433430

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_04175.15.999005845715319e-148Ras family protein (249 aa)
WormBaseWBGene000042668.00275873087502e-68locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
DictyBaseDDB_G02778675.000891205279872e-66rab1B on chromosome: 3 positio
n 743092 to 744234
SGDYFL038C6.997942222381785e-66YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
OxytrichaContig15751.0.0.g873.0012565309061457e-65Ras family
Stentor CoeruleusSteCoe_300107.984904245686979e-30

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00433430(coding)
ATGGCAAATAGAGAATACGACTACTTAATCAAGTTGGTTATTATTGGAAACTCAAGTGTT
GGAAAATCTTCCGTACTCTTGCGTTTTAGTGATGATCAGTTTAGCGAGTCATATTTAACA
ACTATTGGTGTAGATTTTAGATTCAAGACTTTAAACATAGATGGAAGAAAGGTTAAATTA
CAAATTTGGGATACAGCTGGTCAAGAAAGATTCCGTACAATTACTAATGCATATTACAAA
GGAGCAGATGGTATTGTTCTCGTATATGATATCACAAACTCAACATCATTCGAAGACATT
GAACGCTTTTGGCTAAATGAAGTAGAAAGTTATGCTGAAAAAGATGTAGAATTGCTACTT
TTAGGTAACAAAAGCGATCTTTCTGATTAGCGCTAAGTTGAGACAAACATGGTTTCAGAA
TACGCTGAAAAAAAGCACATGGATTTTTATGAAACATCTGCAAAGACATCTGATTAAATT
GAACAAGCTTTCCTCTCTATTTCTAAGAGATTGATGTCTAAAAAGGATGCCAAGCTAGCT
GAAAAGAAGAAGCGTCCCACTAATAGCAAAAAAGGTACTGGATCATCATCTGAAAACTCA
TAGAAATCCTCTTCAACTAGTGCTAATAGTACAACAAATGCAAATAACTCTTAATAACCA
ACCCAAACTAACGAAAAAATATCACTAGGCAGCTCATCTAACCAATAAACTACAAAATCA
AACAAACTAAACTTAGGATGTTGCCAAGTTTGA


>TTHERM_00433430(protein)
MANREYDYLIKLVIIGNSSVGKSSVLLRFSDDQFSESYLTTIGVDFRFKTLNIDGRKVKL
QIWDTAGQERFRTITNAYYKGADGIVLVYDITNSTSFEDIERFWLNEVESYAEKDVELLL
LGNKSDLSDQRQVETNMVSEYAEKKHMDFYETSAKTSDQIEQAFLSISKRLMSKKDAKLA
EKKKRPTNSKKGTGSSSENSQKSSSTSANSTTNANNSQQPTQTNEKISLGSSSNQQTTKS
NKLNLGCCQV


>TTHERM_00433430(gene)
ATGGCAAATAGAGAATACGACTACTTAATCAAGTTGGTTATTATTGGAAACTCAAGTGTT
GGAAAATCTTCCGTACTCTTGCGTTTTAGTGATGATCAGTTTAGCGAGTCATATTTAACA
ACTATTGGTGTAGATTTTAGATTCAAGACTTTAAACATAGATGGAAGAAAGGTTAAATTA
CAAATTTGGGATACAGCTGGTCAAGAAAGATTCCGTACAATTACTAATGCATATTACAAA
GGAGCAGATGGTATTGTTCTCGTATATGATATCACAAACTCAACATCATTCGAAGACATT
GAACGCTTTTGGCTAAATGAAGTAGAAAGTTATGCTGAAAAAGATGTAGAATTGCTACTT
TTAGGTAACAAAAGCGATCTTTCTGATTAGCGCTAAGTTGAGACAAACATGGTTTCAGAA
TACGCTGAAAAAAAGCACATGGATTTTTATGAAACATCTGCAAAGACATCTGATTAAATT
GAACAAGCTTTCCTCTCTATTTCTAAGAGATTGATGTCTAAAAAGGATGCCAAGCTAGCT
GAAAAGAAGAAGCGTCCCACTAATAGCAAAAAAGGTACTGGATCATCATCTGAAAACTCA
TAGAAATCCTCTTCAACTAGTGCTAATAGTACAACAAATGCAAATAACTCTTAATAACCA
ACCCAAACTAACGAAAAAATATCACTAGGCAGCTCATCTAACCAATAAACTACAAAATCA
AACAAACTAAACTTAGGATGTTGCCAAGTTTGA