Identifiers and Description

Gene Model Identifier

TTHERM_00316280

Standard Name

RAB1A

Aliases

PreTt20939 | 31.m00241 | 3687.m00043

Description

Rab I family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF00009 ) Elongation factor Tu GTP binding

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00316280

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_08455.12.9999444238666675e-148Ras family protein (212 aa)
OxytrichaContig15751.0.0.g874.0007753645635287e-88Ras family
DictyBaseDDB_G02837573.0005855096961235e-80rab1A on chromosome: 4 positio
n 1241175 to 1242406
WormBaseWBGene000042666.000287828677204e-80locus:rab-1 status:Confirmed
UniProt:Q9UAQ6 protein_id
:CCD67094.1
SGDYFL038C9.998819815181669e-76YPT1 Rab family GTPase, involv
ed in the ER-to-Golgi step of
the secretory pathway; complex
formation with the Rab escort
protein Mrs6p is required for
prenylation of Ypt1p by prote
in geranylgeranyltransferase t
ype II (Bet2p-Bet4p)
Stentor CoeruleusSteCoe_7321.6458114310822737e-38

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00316280(coding)
ATGAGCTTACAATAAGACTACGACTACTTATTCAAGTTATTGTTGATTGGTAACTCTGCC
GTCGGTAAATCCTCCTTGTTATTGCGTTTTTCTGATAACATCTTTAATGATTGCTTCTTG
CCAACAATTGGTGTTGATTTCAAAATCAGAACTTTTGATATTTAAGGAAAAGCTGTTAAA
TTGTAAATTTGGGATACTGCTGGTCAAGAACGTTTCAAAACTATTACATCATCATATTAC
AAGGGTGCCCACGGTATTATTTTAGTTTATGACATTACCGACAAGCAAACCTTTAAGGAT
ATTGATAACTGGTTAGCTGAAGCTGACAAGAATGCAAATGAAAATGTTATCAAGCTTTTG
GTTGGTAACAAGGCTGATTTAGAAAGCAAGCGTCAAGTTACCTTCGAAGAAGGCAAGGAA
TTAGCTGACTCATTAGGAATTAAATTTATTGAAACTTCAGCTTTGAACTCCAACAACGTC
GAAACTGCTTTCATCACCCTCGCTACTGAAATCAAGAGCAGAGTATAAAAGAACACTGAA
ACTGCCCCCAGAGGTGCAAATGCCCAAACTGGCAAGACCAAAATTAAAGCTGGTGACGAT
CTCAGTAATAAGAAGAAGAAAGACGGCTGCTGCTGA


>TTHERM_00316280(protein)
MSLQQDYDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVK
LQIWDTAGQERFKTITSSYYKGAHGIILVYDITDKQTFKDIDNWLAEADKNANENVIKLL
VGNKADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEIKSRVQKNTE
TAPRGANAQTGKTKIKAGDDLSNKKKKDGCC


>TTHERM_00316280(gene)
ATGAGCTTACAATAAGACTACGACTACTTATTCAAGTTATTGTTGATTGGTAACTCTGCC
GTCGGTAAATCCTCCTTGTTATTGCGTTTTTCTGATAACATCTTTAATGATTGCTTCTTG
CCAACAATTGGTGTTGATTTCAAAATCAGAACTTTTGATATTGTAAGCTAATTTATTTCC
TTTCTTTAAACTCGTCCATTTAACATACTTCAAGCGTGAAAACCAGCAAAAGAAGTTTGC
ATAAATAATTTTTTATCAGACTTTTTACGCCAACTCACGTGGACTTTTTTTTTTACAAAT
TTTTCTAAAGTTAAAAAAAAAACATAGTAAGCGAAAACAAGTACAAAAAATGCGCTGAAA
TTAATTTACAAAAATGGAATTTTTAATTGGCAAAAAAAAAATTAATTAGTTTTATATTTG
AATTAATTAGTAAGGAAAAGCTGTTAAATTGTAAATTTGGGATACTGCTGGTCAAGAACG
TTTCAAAACTATTACATCATCATATTACAAGGGTGCCCACGGTATTATTTTAGTTTATGA
CATTACCGACAAGCAAACCTTTAAGGATATTGATAACTGGTTAGCTGAAGCTGACAAGAA
TGCAAATGAAAATGTTATCAAGCTTTTGGTTGGTAACAAGGCTGATTTAGAAAGCAAGCG
TCAAGTTACCTTCGAAGAAGGCAAGGAATTAGCTGACTCATTAGGAATTAAATTTATTGA
AACTTCAGCTTTGAACTCCAACAACGTCGAAACTGCTTTCATCACCCTCGCTACTGAAAT
CAAGAGCAGAGTATAAAAGAACACTGAAACTGCCCCCAGAGGTGCAAATGCCCAAACTGG
CAAGACCAAAATTAAAGCTGGTGACGATCTCAGTAATAAGAAGAAGAAAGACGGCTGCTG
CTGA