Identifiers and Description

Gene Model Identifier

TTHERM_01099240

Standard Name

RAB11F

Aliases

PreTt20594 | 232.m00061

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF00009 ) Elongation factor Tu GTP binding

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_01099240

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_19394.16.002457252238691e-96Ras family protein (217 aa)
OxytrichaContig12645.0.g315.997992534675281e-52Ras family
DictyBaseDDB_G02771018.996537154595168e-51rab11C on chromosome: 2 positi
on 7509311 to 7510238
SGDYER031C3.9998411574835458e-50YPT31 Rab family GTPase, very
similar to Ypt32p; involved in
the exocytic pathway; mediate
s intra-Golgi traffic or the b
udding of post-Golgi vesicles
from the trans-Golgi
WormBaseWBGene000042741.9998745702418095e-48locus:rab-11.1 status:Confir
med UniProt:O01803 protein
_id:CCD71701.1
Stentor CoeruleusSteCoe_56782.3802664086944007e-26

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01099240(coding)
ATGGAAGAACCCACTCCTTCATACAAGATTATTTTAGTTGGTGACTCTAGTGTAGGTAAG
ACTTGCATCTTTAGTAAATACATTAAGAACTAATACCCAAAAAATGTTGAACCAACTTTA
GGCTAGGAATTTAAAACAAAACCTATTACTCTCCCTGATGGAAAATTAGTAAAAGCTAAC
TTATGGGATACCGCTGGTTAAGAAAAGTATAGATCTTTAATGGCAACAAACTACAGAAAG
GCTGTTGGAGCTATTTTAGTCTATGATATTACTTAAACACCTTCATTCACAAACCTTTAA
CAATGGCTTCAAGATATTAAATTATAAGCTGAACCAGATGTAGTAATCACATTAATAGGT
AATAAAACTGATTTAGAATCTAGTCGTATGGTTAGCACTGAGCAAGGATAAAATTTTGCT
AAATAAAATAATTTAAGCTTCTTTGAAACATCTGCCCTCAACGGAGCAAACTTAGGTTAA
ATTTTTGAAAGTCATTTATTAGAAATTACTAATAAGAAGAAATAGGCTTAATAATTACCT
CAAGGTACTTAGCCTGTTGCTATTAGTAATAACACTTAAAAATAACCAAGTTCAGTCCAA
AATCAACCCTCTCGTGAAATGGGAGAAAGTGGTTGCAAATGCTGA


>TTHERM_01099240(protein)
MEEPTPSYKIILVGDSSVGKTCIFSKYIKNQYPKNVEPTLGQEFKTKPITLPDGKLVKAN
LWDTAGQEKYRSLMATNYRKAVGAILVYDITQTPSFTNLQQWLQDIKLQAEPDVVITLIG
NKTDLESSRMVSTEQGQNFAKQNNLSFFETSALNGANLGQIFESHLLEITNKKKQAQQLP
QGTQPVAISNNTQKQPSSVQNQPSREMGESGCKC


>TTHERM_01099240(gene)
ATGGAAGAACCCACTCCTTCATACAAGATTATTTTAGTTGGTGACTCTAGTGTAGGTAAG
ACTTGCATCTTTAGTAAATACATTAAGAACTAATACCCAAAAAATGTTGAACCAACTTTA
GGCTAGGAATTTAAAACAAAACCTATTACTCTCCCTGATGGAAAATTAGTAAAAGCTAAC
TTATGGGATACCGCTGGTTAAGAAAAGTATAGATCTTTAATGGCAACAAACTACAGAAAG
GCTGTTGGAGCTATTTTAGTCTATGATATTACTTAAACACCTTCATTCACAAACCTTTAA
CAATGGCTTCAAGATATTAAATTATAAGCTGAACCAGATGTAGTAATCACATTAATAGGT
AATAAAACTGATTTAGAATCTAGTCGTATGGTTAGCACTGAGCAAGGATAAAATTTTGCT
AAATAAAATAATTTAAGCTTCTTTGAAACATCTGCCCTCAACGGAGCAAACTTAGGTTAA
ATTTTTGAAAGTCATTTATTAGAAATTACTAATAAGAAGAAATAGGCTTAATAATTACCT
CAAGGTACTTAGCCTGTTGCTATTAGTAATAACACTTAAAAATAACCAAGTTCAGTCCAA
AATCAACCCTCTCGTGAAATGGGAGAAAGTGGTTGCAAATGCTGA