Identifiers and Description

Gene Model Identifier

TTHERM_00389960

Standard Name

RAB11E

Aliases

PreTt24892 | 41.m00299

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_00389960

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_04529.19.997093137033517e-262Ras family protein (442 aa)
OxytrichaContig19093.0.g445.000518477595783e-71Ras family
DictyBaseDDB_G02692381.0001801308941382e-55rab11A on chromosome: 1 positi
on 4269122 to 4270264
WormBaseWBGene000042742.999948199478294e-54locus:rab-11.1 status:Confir
med UniProt:O01803 protein
_id:CCD71701.1
SGDYER031C1.0000099287337047e-53YPT31 Rab family GTPase, very
similar to Ypt32p; involved in
the exocytic pathway; mediate
s intra-Golgi traffic or the b
udding of post-Golgi vesicles
from the trans-Golgi
Stentor CoeruleusSteCoe_56788.985825944049381e-37

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00389960(coding)
ATGAATTCACATAGCGGACCTTATTAAGGTAATGAAAAGCAAGATTCGGATAACTAATCT
TAAAAATAAAGGTATGATAATTAAATGAGAGGTAAAGAAAATATGCCAAATGGAAATAAT
AATACTGGCTCATACTAATAAAGGACAAGTGTGTCTTCAGAATAGAGTCATTAGCAACAT
AATATGAATTAGTAATAGTAATATTAACCTAATTCTACCTAAAATTATTAATAGTAAACA
TCTCTGGGAAGGGATGTAGAAAAAAATAGATAATCTGTCTAATAATAATAATAATAGTAA
TAATAGCAATAAGACTATCCACCACAATAAAATATGTATCCAAATGGATAATAAAATCAA
TAATAATAAATTTCTTAAAAAACACCATAATCTGCTAGCTAATAAAATCAGCAAACTACT
TACAATAAGTCTGAAACTCACACTCATATGTACAAAATTGTTTTAGTTGGGGATGCTGGT
GTTGGTAAAACACATATAATTAACAGGTATGTAAAAGGATAGCTACCACATGCAATAATT
CCTACTATAGGAATAGAATTTGCTACAAAGACTGTCACTCTGAGAGATGGTGGTACTATA
AAGACCCAAATTTGGGATACTGCTGGTTAAGAAAAATATAGAAGTATCACAAGTGCTCAT
TACCGCAAAGCAGTAGGAGCACTTCTTGTTTATGATGTAACTAAAGAAAAATCCTTTGAA
TCTATATAAAGATGGCTTGAAGAAATTAGGCTTCATGCAGATAAAGATATAGTCCTTATG
CTCGTAGGGAATAAAGTCGATTTAATTCATAAAAACCCTGAATAAAGAAAAGTATCGAAA
ATAGAAGCTACAAATTTTGCCAAATAAAATGGTCTTCTATTCGAAGAAAGCAGTGCTCTT
TTTGATGTAAACATAAACGACGTATTCGAAAGACTATTAGAAGAAATTTATGATTAAAAG
TGTCGCCTTTAAAGCGAAAGATCTCTTATTTAAACAGAAGTTGATGATGTAAAAAAGGGA
AATAAGACTATTGACTTAAATCTTCCTACAGCAGCTTAGCCCACTAAAAATTCACTCTGC
AGTTGTGGTTGA


>TTHERM_00389960(protein)
MNSHSGPYQGNEKQDSDNQSQKQRYDNQMRGKENMPNGNNNTGSYQQRTSVSSEQSHQQH
NMNQQQQYQPNSTQNYQQQTSLGRDVEKNRQSVQQQQQQQQQQQDYPPQQNMYPNGQQNQ
QQQISQKTPQSASQQNQQTTYNKSETHTHMYKIVLVGDAGVGKTHIINRYVKGQLPHAII
PTIGIEFATKTVTLRDGGTIKTQIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKEKSFE
SIQRWLEEIRLHADKDIVLMLVGNKVDLIHKNPEQRKVSKIEATNFAKQNGLLFEESSAL
FDVNINDVFERLLEEIYDQKCRLQSERSLIQTEVDDVKKGNKTIDLNLPTAAQPTKNSLC
SCG


>TTHERM_00389960(gene)
ATGAATTCACATAGCGGACCTTATTAAGGTAATGAAAAGCAAGATTCGGATAACTAATCT
TAAAAATAAAGGTATGATAATTAAATGAGAGGTAAAGAAAATATGCCAAATGGAAATAAT
AATACTGGCTCATACTAATAAAGGACAAGTGTGTCTTCAGAATAGAGTCATTAGCAACAT
AATATGAATTAGTAATAGTAATATTAACCTAATTCTACCTAAAATTATTAATAGTAAACA
TCTCTGGGAAGGGATGTAGAAAAAAATAGATAATCTGTCTAATAATAATAATAATAGTAA
TAATAGCAATAAGACTATCCACCACAATAAAATATGTATCCAAATGGATAATAAAATCAA
TAATAATAAATTTCTTAAAAAACACCATAATCTGCTAGCTAATAAAATCAGCAAACTACT
TACAATAAGTCTGAAACTCACACTCATATGTACAAAATTGTTTTAGTTGGGGATGCTGGT
GTTGGTAAAACACATATAATTAACAGGTATGTAAAAGGATAGCTACCACATGCAATAATT
CCTACTATAGGAATAGAATTTGCTACAAAGACTGTCACTCTGAGAGATGGTGGTACTATA
AAGACCCAAATTTGGGATACTGCTGGTTAAGAAAAATATAGAAGTATCACAAGTGCTCAT
TACCGCAAAGCAGTAGGAGCACTTCTTGTTTATGATGTAACTAAAGAAAAATCCTTTGAA
TCTATATAAAGATGGCTTGAAGAAATTAGGCTTCATGCAGATAAAGATATAGTCCTTATG
CTCGTAGGGAATAAAGTCGATTTAATTCATAAAAACCCTGAATAAAGAAAAGTATCGAAA
ATAGAAGCTACAAATTTTGCCAAATAAAATGGTCTTCTATTCGAAGAAAGCAGTGCTCTT
TTTGATGTAAACATAAACGACGTATTCGAAAGACTATTAGAAGAAATTTATGATTAAAAG
TGTCGCCTTTAAAGCGAAAGATCTCTTATTTAAACAGAAGTTGATGATGTAAAAAAGGGA
AATAAGACTATTGACTTAAATCTTCCTACAGCAGCTTAGCCCACTAAAAATTCACTCTGC
AGTTGTGGTTGA