Identifiers and Description

Gene Model Identifier

TTHERM_00389960

Standard Name

RAB11E (RAB GTPase 11E)

Aliases

PreTt24892 | 41.m00299

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00071 ) Ras family
• ( PF08477 ) Miro-like protein
• ( PF01926 ) GTPase of unknown function
• ( PF00025 ) ADP-ribosylation factor family
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_00389960

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04529.1	9.997093137033517e-262	Ras family protein (442 aa)
Oxytricha	Contig19093.0.g44	5.000518477595783e-71	Ras family
DictyBase	DDB_G0269238	1.0001801308941382e-55	rab11A on chromosome: 1 positi on 4269122 to 4270264
WormBase	WBGene00004274	2.999948199478294e-54	locus:rab-11.1 status:Confir med UniProt:O01803 protein _id:CCD71701.1
SGD	YER031C	1.0000099287337047e-53	YPT31 Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediate s intra-Golgi traffic or the b udding of post-Golgi vesicles from the trans-Golgi
Stentor Coeruleus	SteCoe_5678	8.985825944049381e-37

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00389960(coding)
ATGAATTCACATAGCGGACCTTATTAAGGTAATGAAAAGCAAGATTCGGATAACTAATCT
TAAAAATAAAGGTATGATAATTAAATGAGAGGTAAAGAAAATATGCCAAATGGAAATAAT
AATACTGGCTCATACTAATAAAGGACAAGTGTGTCTTCAGAATAGAGTCATTAGCAACAT
AATATGAATTAGTAATAGTAATATTAACCTAATTCTACCTAAAATTATTAATAGTAAACA
TCTCTGGGAAGGGATGTAGAAAAAAATAGATAATCTGTCTAATAATAATAATAATAGTAA
TAATAGCAATAAGACTATCCACCACAATAAAATATGTATCCAAATGGATAATAAAATCAA
TAATAATAAATTTCTTAAAAAACACCATAATCTGCTAGCTAATAAAATCAGCAAACTACT
TACAATAAGTCTGAAACTCACACTCATATGTACAAAATTGTTTTAGTTGGGGATGCTGGT
GTTGGTAAAACACATATAATTAACAGGTATGTAAAAGGATAGCTACCACATGCAATAATT
CCTACTATAGGAATAGAATTTGCTACAAAGACTGTCACTCTGAGAGATGGTGGTACTATA
AAGACCCAAATTTGGGATACTGCTGGTTAAGAAAAATATAGAAGTATCACAAGTGCTCAT
TACCGCAAAGCAGTAGGAGCACTTCTTGTTTATGATGTAACTAAAGAAAAATCCTTTGAA
TCTATATAAAGATGGCTTGAAGAAATTAGGCTTCATGCAGATAAAGATATAGTCCTTATG
CTCGTAGGGAATAAAGTCGATTTAATTCATAAAAACCCTGAATAAAGAAAAGTATCGAAA
ATAGAAGCTACAAATTTTGCCAAATAAAATGGTCTTCTATTCGAAGAAAGCAGTGCTCTT
TTTGATGTAAACATAAACGACGTATTCGAAAGACTATTAGAAGAAATTTATGATTAAAAG
TGTCGCCTTTAAAGCGAAAGATCTCTTATTTAAACAGAAGTTGATGATGTAAAAAAGGGA
AATAAGACTATTGACTTAAATCTTCCTACAGCAGCTTAGCCCACTAAAAATTCACTCTGC
AGTTGTGGTTGA

>TTHERM_00389960(protein)
MNSHSGPYQGNEKQDSDNQSQKQRYDNQMRGKENMPNGNNNTGSYQQRTSVSSEQSHQQH
NMNQQQQYQPNSTQNYQQQTSLGRDVEKNRQSVQQQQQQQQQQQDYPPQQNMYPNGQQNQ
QQQISQKTPQSASQQNQQTTYNKSETHTHMYKIVLVGDAGVGKTHIINRYVKGQLPHAII
PTIGIEFATKTVTLRDGGTIKTQIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKEKSFE
SIQRWLEEIRLHADKDIVLMLVGNKVDLIHKNPEQRKVSKIEATNFAKQNGLLFEESSAL
FDVNINDVFERLLEEIYDQKCRLQSERSLIQTEVDDVKKGNKTIDLNLPTAAQPTKNSLC
SCG

>TTHERM_00389960(gene)
ATGAATTCACATAGCGGACCTTATTAAGGTAATGAAAAGCAAGATTCGGATAACTAATCT
TAAAAATAAAGGTATGATAATTAAATGAGAGGTAAAGAAAATATGCCAAATGGAAATAAT
AATACTGGCTCATACTAATAAAGGACAAGTGTGTCTTCAGAATAGAGTCATTAGCAACAT
AATATGAATTAGTAATAGTAATATTAACCTAATTCTACCTAAAATTATTAATAGTAAACA
TCTCTGGGAAGGGATGTAGAAAAAAATAGATAATCTGTCTAATAATAATAATAATAGTAA
TAATAGCAATAAGACTATCCACCACAATAAAATATGTATCCAAATGGATAATAAAATCAA
TAATAATAAATTTCTTAAAAAACACCATAATCTGCTAGCTAATAAAATCAGCAAACTACT
TACAATAAGTCTGAAACTCACACTCATATGTACAAAATTGTTTTAGTTGGGGATGCTGGT
GTTGGTAAAACACATATAATTAACAGGTATGTAAAAGGATAGCTACCACATGCAATAATT
CCTACTATAGGAATAGAATTTGCTACAAAGACTGTCACTCTGAGAGATGGTGGTACTATA
AAGACCCAAATTTGGGATACTGCTGGTTAAGAAAAATATAGAAGTATCACAAGTGCTCAT
TACCGCAAAGCAGTAGGAGCACTTCTTGTTTATGATGTAACTAAAGAAAAATCCTTTGAA
TCTATATAAAGATGGCTTGAAGAAATTAGGCTTCATGCAGATAAAGATATAGTCCTTATG
CTCGTAGGGAATAAAGTCGATTTAATTCATAAAAACCCTGAATAAAGAAAAGTATCGAAA
ATAGAAGCTACAAATTTTGCCAAATAAAATGGTCTTCTATTCGAAGAAAGCAGTGCTCTT
TTTGATGTAAACATAAACGACGTATTCGAAAGACTATTAGAAGAAATTTATGATTAAAAG
TGTCGCCTTTAAAGCGAAAGATCTCTTATTTAAACAGAAGTTGATGATGTAAAAAAGGGA
AATAAGACTATTGACTTAAATCTTCCTACAGCAGCTTAGCCCACTAAAAATTCACTCTGC
AGTTGTGGTTGA