Identifiers and Description

Gene Model Identifier

TTHERM_00994240

Standard Name

RAB11 (Rab)

Aliases

PreTt20020 | 187.m00057 | Rab11G

Description

Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events;

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.7%

TetraMine Data

TTHERM_00994240

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_05565.11.9996385480812013e-123Ras family protein (214 aa)
OxytrichaContig16926.0.g719.004005705510192e-49Ras family
SGDYGL210W1.000159011384939e-43YPT32 Rab family GTPase, very
similar to Ypt31p; involved in
the exocytic pathway; mediate
s intra-Golgi traffic or the b
udding of post-Golgi vesicles
from the trans-Golgi
DictyBaseDDB_G02692385.000680012816624e-42rab11A on chromosome: 1 positi
on 4269122 to 4270264
WormBaseWBGene000042752.0005131442217614e-40locus:rab-11.2 status:Partia
lly_confirmed UniProt:Q1ZXR4
protein_id:CAJ85753.1
Stentor CoeruleusSteCoe_264397.095474162284704e-23

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00994240(coding)
ATGATAGATTTTCCCTAAGATTATGATTACTTATTTAAAATAGTATTAGTAGGCGATCCA
AAAGTAGGAAAAAGCTATATTTTATCATAGTATATAAGAGAAGATTTTGACCTTGAAAAC
AAGGACACTATTGGAGTTGAATTTGACTAAAAATTCTACCCCACTATGCCTGGATAGGAT
AAAATTTTAGTATAATTATGGGATAGCGCAGGAAAATATGGATTTTTATAGAAGTTACCT
TCTTACTTTAGAGCTTCCACAGGAGCTTTGCTAATTTTTGATGTGACAAAAAAAGACTCT
TTTCTTAATTGCGAAAAATGGTACAATACAATAACATCGCTAGCAGACCCACATATTCAA
ATAGTTTTAGTCGGAAATAAAACAGACTTAAGCAATTTAAGAATAGTTTCAAGACAAGAA
GCAGAAGATTTTGCAAAATAAAGGAATATTAAATACATAGAAGTTAGTGCCTTAACTGGA
AATAATATAGATGAAGCAGTTGGAATTGTTGTTGAAGATACCATGAGACTGATTAGATCA
AATAGTTACAATGTTTCTACAAATAAAAATATTTTGCTTAAACATAGAGTAGATGTATCA
TAGAGAAATTAATGCTGTGGAACTGGAGGAATGGTTTGA


>TTHERM_00994240(protein)
MIDFPQDYDYLFKIVLVGDPKVGKSYILSQYIREDFDLENKDTIGVEFDQKFYPTMPGQD
KILVQLWDSAGKYGFLQKLPSYFRASTGALLIFDVTKKDSFLNCEKWYNTITSLADPHIQ
IVLVGNKTDLSNLRIVSRQEAEDFAKQRNIKYIEVSALTGNNIDEAVGIVVEDTMRLIRS
NSYNVSTNKNILLKHRVDVSQRNQCCGTGGMV


>TTHERM_00994240(gene)
ATGATAGATTTTCCCTAAGATTATGATTACTTATTTAAAATAGTATTAGTAGGTAGGTAT
TTAATTAAATCATTTATTTAGATTATTATTTATTCATTAAATAGAACAAATGAAATTTAA
TTCCATCTTTATATTAAAAAATTATGAAATCTATTGTACGAATAAATAATCTGTATTTTT
TTAAAAAAGGCGATCCAAAAGTAGGAAAAAGCTATATTTTATCATAGTATATAAGAGAAG
ATTTTGACCTTGAAAACAAGGACACTATTGGAGTTGAATTTGACTAAAAATTCTACCCCA
CTATGCCTGGATAGGATAAAATTTTAGTATAATTATGGGATAGCGCAGGAAAATATGGAT
TTTTATAGAAGTTACCTTCTTACTTTAGAGCTTCCACAGGAGCTTTGCTAATTTTTGATG
TGACAAAAAAAGACTCTTTTCTTAATTGCGAAAAATGGTACAATACAATAACATCGCTAG
CAGACCCACATATTCAAATAGTTTTAGTCGGAAATAAAACAGACTTAAGCAATTTAAGAA
TAGTTTCAAGACAAGAAGCAGAAGATTTTGCAAAATAAAGGAATATTAAATACATAGAAG
TTAGTGCCTTAACTGGAAATAATATAGATGAAGCAGTTGGAATTGTTGTTGAAGGTAATA
TATGAATATCCAATTCATTTTTACAATTATTTTACTTAAAAATAAATAAATTTACAAAAA
TACATTTATTTATTGCCAGTGAATTGGTAAATTAAAAATTTCATTTAAATAAATTTAAAG
ATACCATGAGACTGATTAGATCAAATAGTTACAATGTTTCTACAAATAAAAATATTTTGC
TTAAACATAGAGTAGATGTATCATAGAGAAATTAATGCTGTGGAACTGGAGGAATGGTTT
GA