Identifiers and Description

Gene Model Identifier

TTHERM_00077090

Standard Name

PZN2

Aliases

PreTt10055 | 5.m00406 | 3828.m01316

Description

poly polymerase and DNA-ligase Zn-finger region family protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Molecular Function

Domains

  • ( PF02037 ) SAP domain
  • ( PF08063 ) PADR1 (NUC008) domain
  • ( TIGR01634 ) phage tail protein I
  • ( PF00645 ) Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00077090

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_07117.14.001113299181986e-136hypothetical protein (232 aa)
DictyBaseDDB_G02918720.0005997485943342685DDB_G0291872 on chromosome: 6
position 855161 to 857960
SGDYMR306W0.0005997485943342685FKS3 Protein involved in spore
wall assembly, has similarity
to 1,3-beta-D-glucan synthase
catalytic subunits Fks1p and
Gsc2p; the authentic, non-tagg
ed protein is detected in high
ly purified mitochondria in hi
gh-throughput studies

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:23884606: Gao S, Xiong J, Zhang C, Berquist BR, Yang R, Zhao M, Molascon AJ, Kwiatkowski SY, Yuan D, Qin Z, Wen J, Kapler GM, Andrews PC, Miao W, Liu Y (2013) Impaired replication elongation in Tetrahymena mutants deficient in histone H3 Lys 27 monomethylation. Genes & development 27(15):1662-79

Sequences

>TTHERM_00077090(coding)
ATGACAGATTTTAAGTCCTTTTATTACGAGTGCTATTGTGCTGAATTAGCTAAGAGCAAT
AAATCAGAATGCAAAGGATGCTAAAAAACTATTGATCAAGGAACTTTGAGAATTGGCCAT
ACAGTTTATTTTGATGAGGAACACACTCATATTAACAAAAAGTGGTACCATCCAAGTTGC
TTAACACTGCCTGAAAAATTCAAAAATCTCAAAGTTTGGGACATTTAGGACATAGATGAA
CTAGATGAAAAATATCATAAGGAAATTAGAGATGCTCTCAAAATATAATAAGGTGATAAA
AATAAAAGAGTAAAGCATCTCCCAAAAGTTGTTGTCCGTTAACACAGACCAGTAGAAAAA
GTTGAGTAACAAAAAACATTAACAAAGGCTCAATGGAAGGAATACTAATCATACAGGAAA
TTGTTCGAGAAAAAAACAGTGAAACAATTATAAGAATTGTTAACTAAAAATAATGCTTCA
GTAAGTGGAGCTAAGGAATAACTAGTTTATAGATGTGCACTTTCTAAGGTATTAGGCATT
CAGCCTAATTGTCCTTCTTGTGGTGGGTAAAATCTCAGATTCTACTTTGCTGATGGCTAA
TATTATTGCCCTGGATATCTTGATGATACCGATTGGGTTAATTGTAAAAACTGGTTCGAT
TTAGATGAAGTAGAAAGAACCAAATGGGTTGATTGA


>TTHERM_00077090(protein)
MTDFKSFYYECYCAELAKSNKSECKGCQKTIDQGTLRIGHTVYFDEEHTHINKKWYHPSC
LTLPEKFKNLKVWDIQDIDELDEKYHKEIRDALKIQQGDKNKRVKHLPKVVVRQHRPVEK
VEQQKTLTKAQWKEYQSYRKLFEKKTVKQLQELLTKNNASVSGAKEQLVYRCALSKVLGI
QPNCPSCGGQNLRFYFADGQYYCPGYLDDTDWVNCKNWFDLDEVERTKWVD


>TTHERM_00077090(gene)
ATGACAGATTTTAAGTCCTTTTATTACGAGTGCTATTGTGCTGAATTAGCTAAGAGCAAT
AAATCAGAATGCAAAGGATGCTAAAAAACTATTGATCAAGGAACTTTGAGAATTGGCCAT
ACAGTTTATTTTGATGAGGAACACACTCATATTAACAAAAAGTGGTACCATCCAAGTTGC
TTAACACTGCCTGAAAAATTCAAAAATCTCAAAGTTTGGGACATTTAGGACATAGATGAA
CTAGATGAAAAATATCATAAGGAAATTAGAGATGCTCTCAAAATATAATAAGGTGATAAA
AATAAAAGAGTAAAGCATCTCCCAAAAGTTGTTGTCCGTTAACACAGACCAGTAGAAAAA
GTTGAGTAACAAAAAACATTAACAAAGGCTCAATGGAAGGAATACTAATCATACAGGAAA
TTGTTCGAGAAAAAAACAGTGAAACAATTATAAGAATTGTTAACTAAAAATAATGCTTCA
GTAAGTGGAGCTAAGGAATAACTAGTTTATAGATGTGCACTTTCTAAGGTATTAGGCATT
CAGCCTAATTGTCCTTCTTGTGGTGGGTAAAATCTCAGATTCTACTTTGCTGATGGCTAA
TATTATTGCCCTGGATATCTTGATGATACCGATTGGGTTAATTGTAAAAACTGGTTCGAT
TTAGATGAAGTAGAAAGAACCAAATGGGTTGATTGA