Identifiers and Description

Gene Model Identifier

TTHERM_00649280

Standard Name

PRP9 (pre-mRNA processing factor 9)

Aliases

PreTt09242 | 94.m00160 | 3677.m00068

Description

splicesome-associated protein, putative

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF06220 ) U1 zinc finger
• ( PF00096 ) Zinc finger, C2H2 type

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.5%

TetraMine Data

TTHERM_00649280

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_17885.1	9.997093137033517e-262	splicesome-associated protein (525 aa)
Oxytricha	Contig19116.0.1.g102	4.000944328304913e-112	hypothetical protein
WormBase	WBGene00011758	7.999011707514803e-86	status:Confirmed UniProt:Q22 469 protein_id:CAA91420.2
DictyBase	DDB_G0270020	9.001321650308988e-69	sf3a3 on chromosome: 1 positio n 4032294 to 4034133
Stentor Coeruleus	SteCoe_268	5.665668176358939e-52
SGD	YDL030W	1.9993430003514377e-39	PRP9 Subunit of the SF3a splic ing factor complex, required f or spliceosome assembly; acts after the formation of the U1 snRNP-pre-mRNA complex

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00649280(coding)
ATGTCAGCGAATTGGTTAGAGTAAACAAGAAGTGTTTTAGAAAACATTGAACTTCTTGAT
CAGACTGTTTTGGATTTCATGTTTGATAAACTTGAAAATCCTAAAGATTAGGTGATCATT
GATAATAAATTAAAAAATTTGATTGAAATGAAGTAAAGTAAATGCATGGATGCTTTAATA
TTACTATAAGATTTTGATGGCGTTAAGAAAGAAGAAATGGCTATCCTTGAAGGCAAAAAG
AGTGTTAGTGCTGGTACAAGATAGCCTGATATTTGGTATAATTTCTAATAGCGCTTAAAG
GATATTAAGGAATATTATAAAAAGCATTAGAATCAAAATATTTAAGTAATCGATAAGGAA
TTCTTGAAAAAAAATGTATTCAGTCCTCCTTATTCTGAACCTTTATTTTCTACTGATGAA
TAATAAGGAAAATATGTTGATATGAATGTGCTTTATTATGAATTTTTAAGTTTTGATTTA
AAGAAAAAGAAAAAAGTTAGACTTTCTGAAGATTACCACATTGGTGATTATTTGTGGTAC
TTAGAAAAGTTTGATGCCTTCCACGAAATTCCTCTTGCTCTTAAATAAAAAGAATATTCA
AGTTATAAGTAATACTTATAGAACCTTATTAATTACTTGAAGGAATTCTTTTTAAAAACT
CAACCTTTGACTGAGTTTTCCATTATTGATAGATAAATTCAGTAGGACTTCGAATATCGC
TGGAAAGAAGGATCTATTCCAGGCTGGACAAATTCAGGATATGAAGATGTTATTGATTAT
TCAAGCAATGAACTTTTCTGCAAAGCATGTAAGAAGTTATTCTCCAACAGTAGTATTTTC
GCCCATCACTTAGAAGGTAAGAAACATAAAATGGCTCAAAAAAATCTTGAAAAAGAAGAA
GAAAAAATGTCTAAATTAGAAGGAGCTCCTGAAAAAACTGATATGGGATAGGATGATTAA
GATTAGTAAACTACAGGAGAAATTAACATGAAGGATGAGTAAAAGAAAAAATAATTAGCT
CATTTAGAATAATATATTATAGGCTTGAAAAAATAATTAGGTGAGGTAATTAATGAAACT
ATCCTCTATGTTAAAAAGAAGCAAACAAGAACATATTAAGAAATTGAAGCAGAAAACCAA
TAAGAAAAGGATGCTGAACCCTAGAGTGATAGTGAAGATGATGACATTCCATACAATCCT
AAGAATGTGCCTTTGGGCCCTGATGGAAAGCCTATTCCATATTGGTTGTACAAGCTTCAC
TAGCTAGGTATTGAGTACAAATGTGAAATATGTGGTAACTACAGTTACTGGGGAAGAAGA
GCTTTTGAAAAGCATTTCTCAGAATGGAGACACAGTTATGGTATGAAGTGCTTAAAAATA
CCCAATACTATTCACTTCAAGGAAATTACATCTATCAAGGATGCTCTCGCTCTTCACCAT
AAACTTTCTATGGAAAGCGAATATTCTTAATTCAACATTGATCAAGAAGAAGAATATGAA
GATTCTGATGGAAATATACTTAACAAAAAGACTTATAATGATCTTAAAAAGCAAGGATTG
TTGTGA

>TTHERM_00649280(protein)
MSANWLEQTRSVLENIELLDQTVLDFMFDKLENPKDQVIIDNKLKNLIEMKQSKCMDALI
LLQDFDGVKKEEMAILEGKKSVSAGTRQPDIWYNFQQRLKDIKEYYKKHQNQNIQVIDKE
FLKKNVFSPPYSEPLFSTDEQQGKYVDMNVLYYEFLSFDLKKKKKVRLSEDYHIGDYLWY
LEKFDAFHEIPLALKQKEYSSYKQYLQNLINYLKEFFLKTQPLTEFSIIDRQIQQDFEYR
WKEGSIPGWTNSGYEDVIDYSSNELFCKACKKLFSNSSIFAHHLEGKKHKMAQKNLEKEE
EKMSKLEGAPEKTDMGQDDQDQQTTGEINMKDEQKKKQLAHLEQYIIGLKKQLGEVINET
ILYVKKKQTRTYQEIEAENQQEKDAEPQSDSEDDDIPYNPKNVPLGPDGKPIPYWLYKLH
QLGIEYKCEICGNYSYWGRRAFEKHFSEWRHSYGMKCLKIPNTIHFKEITSIKDALALHH
KLSMESEYSQFNIDQEEEYEDSDGNILNKKTYNDLKKQGLL

>TTHERM_00649280(gene)
ATGTCAGCGAATTGGTTAGAGTAAACAAGAAGTGTTTTAGAAAACATTGAACTTCTTGAT
CAGACTGTTTTGGATTTCATGTTTGATAAACTTGAAAATCCTAAAGATTAGGTGATCATT
GATAATAAATTAAAAAATTTGATTGAAATGAAGTAAAGTAAATGCATGGATGCTTTAATA
TTACTATAAGATTTTGATGGCGTTAAGAAAGAAGAAATGGCTATCCTTGAAGGCAAAAAG
AGTGTTAGTGCTGGTACAAGATAGCCTGATATTTGGTATAATTTCTAATAGCGCTTAAAG
GATATTAAGGAATATTATAAAAAGCATTAGAATCAAAATATTTAAGTAATCGATAAGGAA
TTCTTGAAAAAAAATGTATTCAGTCCTCCTTATTCTGAACCTTTATTTTCTACTGATGAA
TAATAAGGAAAATATGTTGATATGAATGTGCTTTATTATGAATTTTTAAGTTTTGATTTA
AAGAAAAAGAAAAAAGTTAGACTTTCTGAAGATTACCACATTGGTGATTATTTGTGGTAC
TTAGAAAAGTTTGATGCCTTCCACGAAATTCCTCTTGCTCTTAAATAAAAAGAATATTCA
AGTTATAAGTAATACTTATAGAACCTTATTAATTACTTGAAGGAATTCTTTTTAAAAACT
CAACCTTTGACTGAGTTTTCCATTATTGATAGATAAATTCAGTAGGACTTCGAATATCGC
TGGAAAGAAGGATCTATTCCAGGCTGGACAAATTCAGGATATGAAGATGTTATTGATTAT
TCAAGCAATGAACTTTTCTGCAAAGCATGTAAGAAGTTATTCTCCAACAGTAGTATTTTC
GCCCATCACTTAGAAGGTAAGAAACATAAAATGGCTCAAAAAAATCTTGAAAAAGAAGAA
GAAAAAATGTCTAAATTAGAAGGAGCTCCTGAAAAAACTGATATGGGATAGGATGATTAA
GATTAGTAAACTACAGGAGAAATTAACATGAAGGATGAGTAAAAGAAAAAATAATTAGCT
CATTTAGAATAATATATTATAGGCTTGAAAAAATAATTAGGTGAGGTAATTAATGAAACT
ATCCTCTATGTTAAAAAGAAGCAAACAAGGTAAAGATCATTTATTTTAATTAAAAGATGT
ATTTTAAATTTATTTTTAAAAAAGAACATATTAAGAAATTGAAGCAGAAAACCAATAAGA
AAAGGATGCTGAACCCTAGAGTGATAGTGAAGATGATGACATTCCATACAATCCTAAGAA
TGTGCCTTTGGGCCCTGATGGAAAGCCTATTCCATATTGGTTGTACAAGCTTCACTAGCT
AGGTATTGAGTACAAATGTGAAATATGTGGTAACTACAGTTACTGGGGAAGAAGAGCTTT
TGAAAAGCATTTCTCAGAATGGAGACACAGTTATGGTATGAAGTGCTTAAAAATACCCAA
TACTATTCACTTCAAGGAAATTACATCTATCAAGGATGCTCTCGCTCTTCACCATAAACT
TTCTATGGAAAGCGAATATTCTTAATTCAACATTGATCAAGAAGAAGAATATGAAGATTC
TGATGGAAATATACTTAACAAAAAGACTTATAATGATCTTAAAAAGCAAGGATTGTTGTG
A