Identifiers and Description

Gene Model Identifier

TTHERM_00684450

Standard Name

PRP5 (pre-mRNA processing factor 5)

Aliases

PreTt18158 | 104.m00090 | 3732.m00004

Description

PRP5 Pre-mRNA-splicing factor prp46; pre-mRNA processing factor

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00400 ) WD domain, G-beta repeat
• ( PF08946 ) Osmosensory transporter coiled coil

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00684450

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_17333.1	9.997093137033517e-262	hypothetical protein (552 aa)
Oxytricha	Contig20238.0.g39	2.0001055857497602e-161	WD domain, G-beta repeat
DictyBase	DDB_G0279507	1.99904246446894e-143	plrg1 on chromosome: 3 positio n 2174875 to 2176510
WormBase	WBGene00006481	1.9995317320402142e-140	locus:plrg-1 status:Confirme d UniProt:G5ECP2 protein_i d:CBW48353.1
SGD	YPL151C	2.000808864924972e-124	PRP46 Member of the NineTeen C omplex (NTC) that contains Prp 19p and stabilizes U6 snRNA in catalytic forms of the splice osome containing U2, U5, and U 6 snRNAs
Stentor Coeruleus	SteCoe_31078	1.4411565509640892e-64

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00684450(coding)
ATGGCTGGGATCGATCAATTAATCAACTAAGAGATATCAGACTTTACTTTAGATTCTGTT
TATAATAGTAAAAAAATGTTTATGAGCAATTTGGGCTTGAAAGTGCCTGATTTCATTGAA
AGTACTAGATTAAAATTATAAGTTAAGATTAATGATGAGTATAAATTTGCTTATGATAAG
TAGATAAAAGAGGCTTAAAAATAAGAGGAGCAAGATATCCTCAAGCTTGCAGAATAATTT
TATGATTAATCAACAGAAAGTAATGTCCTTCTTAACGAGCAAGTCCAAAAAATGCAAGAA
GAAAAGAAAATCAAGGAATTAAATGCTTAGAAAAGAAGCAATATCGAAGTAGTAATTGAA
TAAATACCTGAAAAGCAAATTGAAATTAATAAAAAGTTATCAAAACTCCCAGCTTCTTTC
CTAAAATATGGATAAAAGGCTGGATTAGATAGTCAAACTTTAGAAAAGAAAAAGGAAGAA
GAAAGACTTATGCTTACTTATTCAGGATCAGCATCTACTGCTAATAATTAATTATTATCA
TAAAGTGAGAGAGATGCTTCTAAATATCAAATAGCTAATCTATCTACTGATAACTATGTT
AAAGGAGGTGAAGTTATTGATACTGTTAGAATGGGATCTGCTATCGCAAGAAATATTACA
AAGGTTATTAAGCCTGAGTGGCATAAACCTTGGAAATTAATGAGAGTTATTGCTGGCCAC
AGAGGTTGGGTTAGGTGCGTAACTATAGATCCTGCAAATTAATTCTTTGTTACAGGATCA
AACGATAGAACAATTAAATTCTGGGATTTAGCCTCAGGATAATTGAAATTAACCCTAACT
GGCCACACATCTCCCGTTAGAGCTTTAGTAGTATCTGACAGACATCCTTACTTGTTCTCT
GCAGCCGAAGATAAAACTGTTCGTTGCTGGGATCTTGAAATGAATTAAGTCATCAGAAAC
TATCACGGACATTTATCAAGTGTTCATTCTATTTGCATTCACCCTACTTTAAACTTAATT
GCAACTGGTGGCAGAGATTGTACAATTAGATTATGGGATATAAGAGCAAGATCGTAGGTA
CATGTTTTAACTGGACATTAGCATGCTGTAGGAACTGTTATAAGTTAAGAATTTGAACCT
TAAATAGTATCAGGCTCTTATGATAATTATATTAAAACTTGGGATATTGCAGCAGGAAAA
TGTATGAAAACATTGACAAACCATAAGAAACCTGTAAAGTCTTTAGTTTTTCACCATAAA
GAATACACATTTGCTTCAGGTGCAGCTGATAATATCAAGGTTTGGAAGTGTCCCGAAGGA
GAATTTTTAAGAAATATATCATCTGGAAATGATCATATAGTAAATTCAATTGCTTTAAAT
TAGGATAATGTACTCGTTAGCGGTTGTGATGATGGTACTCTCAAATTTTGGGACTGGAAA
TCAGGATATAATTTCTAAACAATTAAATAAAAGCCATAACCTGGTTCTATAGCTGCAGAA
AATGCTATTTTTGATATGAAATTTGATAGATCATAAATGAGACTAATCACTGCTGAGTGT
GATAAAACTATAAAAGTTTATAAGGAAGATGATGAAGCTACAATGGAATCTCATCCAATA
AATGATTTTAAAGTAGAATATGGAAAGCAAGTTTATTGA

>TTHERM_00684450(protein)
MAGIDQLINQEISDFTLDSVYNSKKMFMSNLGLKVPDFIESTRLKLQVKINDEYKFAYDK
QIKEAQKQEEQDILKLAEQFYDQSTESNVLLNEQVQKMQEEKKIKELNAQKRSNIEVVIE
QIPEKQIEINKKLSKLPASFLKYGQKAGLDSQTLEKKKEEERLMLTYSGSASTANNQLLS
QSERDASKYQIANLSTDNYVKGGEVIDTVRMGSAIARNITKVIKPEWHKPWKLMRVIAGH
RGWVRCVTIDPANQFFVTGSNDRTIKFWDLASGQLKLTLTGHTSPVRALVVSDRHPYLFS
AAEDKTVRCWDLEMNQVIRNYHGHLSSVHSICIHPTLNLIATGGRDCTIRLWDIRARSQV
HVLTGHQHAVGTVISQEFEPQIVSGSYDNYIKTWDIAAGKCMKTLTNHKKPVKSLVFHHK
EYTFASGAADNIKVWKCPEGEFLRNISSGNDHIVNSIALNQDNVLVSGCDDGTLKFWDWK
SGYNFQTIKQKPQPGSIAAENAIFDMKFDRSQMRLITAECDKTIKVYKEDDEATMESHPI
NDFKVEYGKQVY

>TTHERM_00684450(gene)
ATGGCTGGGATCGATCAATTAATCAACTAAGAGATATCAGACTTTACTTTAGATTCTGTT
TATAATAGTAAAAAAATGTTTATGAGCAATTTGGGCTTGAAAGTGCCTGATTTCATTGAA
AGTACTAGATTAAAATTATAAGTTAAGATTAATGATGAGTATAAATTTGCTTATGATAAG
TAGATAAAAGAGGCTTAAAAATAAGAGGAGCAAGATATCCTCAAGCTTGCAGAATAATTT
TATGATTAATCAACAGAAAGTAATGTCCTTCTTAACGAGCAAGTCCAAAAAATGCAAGAA
GAAAAGAAAATCAAGGAATTAAATGCTTAGAAAAGAAGCAATATCGAAGTAGTAATTGAA
TAAATACCTGAAAAGCAAATTGAAATTAATAAAAAGTTATCAAAACTCCCAGCTTCTTTC
CTAAAATATGGATAAAAGGCTGGATTAGATAGTCAAACTTTAGAAAAGAAAAAGGAAGAA
GAAAGACTTATGCTTACTTATTCAGGATCAGCATCTACTGCTAATAATTAATTATTATCA
TAAAGTGAGAGAGATGCTTCTAAATATCAAATAGCTAATCTATCTACTGATAACTATGTT
AAAGGAGGTGAAGTTATTGATACTGTTAGAATGGGATCTGCTATCGCAAGAAATATTACA
AAGGTTATTAAGCCTGAGTGGCATAAACCTTGGAAATTAATGAGAGTTATTGCTGGCCAC
AGAGGTTGGGTTAGGTGCGTAACTATAGATCCTGCAAATTAATTCTTTGTTACAGGATCA
AACGATAGAACAATTAAATTCTGGGATTTAGCCTCAGGATAATTGAAATTAACCCTAACT
GGCCACACATCTCCCGTTAGAGCTTTAGTAGTATCTGACAGACATCCTTACTTGTTCTCT
GCAGCCGAAGATAAAACTGTTCGTTGCTGGGATCTTGAAATGAATTAAGTCATCAGAAAC
TATCACGGACATGTAAATTAAATAATATTTATAAATTAATTTTAAAAGTTACTTGTTAAT
TTGAAAAAATGAATTAATTATAATGAATTTTATTTAAATTAGTTATCAAGTGTTCATTCT
ATTTGCATTCACCCTACTTTAAACTTAATTGCAACTGGTGGCAGAGATTGTACAATTAGA
TTATGGGATATAAGGTAGCATATTCAAAATTAAATTAGATATAAAATAATATTTTTTATC
TTAAAATAGAGCAAGATCGTAGGTACATGTTTTAACTGGACATTAGCATGCTGTAGGAAC
TGTTATAAGTTAAGAATTTGAACCTTAAATAGTATCAGGCTCTTATGATAATTATATTAA
AACTTGGGATATTGCAGCAGGAAAATGTATGAAAACATTGACAAACCATAAGAAACCTGT
AAAGTCTTTAGTTTTTCACCATAAAGAATACACATTTGCTTCAGGTGCAGCTGATAATAT
CAAGGTTTGGAAGTGTCCCGAAGGAGAATTTTTAAGAAATATATCATCTGGAAATGATCA
TATAGTAAATTCAATTGCTTTAAATTAGGATAATGTACTCGTTAGCGGTTGTGATGATGG
TAATTTAAGATTAAATTTTATCAATATTGATTAAAAAATAATTAAAATATAAAAGGTACT
CTCAAATTTTGGGACTGGAAATCAGGATATAATTTCTAAACAATTAAATAAAAGCCATAA
CCTGGTTCTATAGCTGCAGAAAATGCTATTTTTGATATGAAATTTGATAGATCATAAATG
AGGTAAGCTAAACAAACATAAAAAATTTTAATTTCTAATAATTATATTTTTAAAATAGAC
TAATCACTGCTGAGTGTGATAAAACTATAAAAGTTTATAAGGAAGATGATGAAGCTACAA
TGGAATCTCATCCAATAAATGATTTTAAAGTAGAATATGGAAAGCAAGTTTATTGA