Identifiers and Description
Gene Model Identifier
TTHERM_00525150Standard Name
PRP2 (Pre-mRNA Processing factor 2)Aliases
PreTt06352 | 66.m00151 | 3722.m00010Description
PRP2 U2 snRNP auxilliary splicing factor; U2 snRNP auxilliary factor; splicing factorGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- macronucleus (IDA) | GO:0031039 | Ref:SUPR000274
Biological Process
- regulation of mRNA splicing, via spliceosome (IDA) | GO:0048024 | Ref:SUPR000274
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.8%
TetraMine Data
TTHERM_00525150
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_13363.1 9.997093137033517e-262 U2 snRNP auxilliary factor, sp
licing factor (473 aa)
Oxytricha Contig20715.0.g17 3.000458792073453e-56 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00006697 6.000354955737408e-39 locus:uaf-1 status:Confirmed
UniProt:Q8MXS2 protein_id
:CCD62281.1
DictyBase DDB_G0286395 4.998978211117678e-38 u2af2 on chromosome: 4 positio
n 4405482 to 4407497
Stentor Coeruleus SteCoe_4228 4.780892883885469e-25 SGD YIR005W 0.0005997485943342685 IST3 Component of the U2 snRNP
, required for the first catal
ytic step of splicing and for
spliceosomal assembly; interac
ts with Rds3p and is required
for Mer1p-activated splicing
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00525150(coding)
ATGGATATCGAAATTAATTAACTATAATATAATAATCAATAAGGAGAGGAGTTTAAGTAA
GCTGAAGAATAAATAATTGAATAGGATCATAGAAAATATTCTAGTGATGAAGAAGAGGAA
GATGATGAAGATATCATATAAAAATAAAAAAACGAATCTATCAAAGATGAGAATACTACA
TAAATAAGCAATTAAGATGGAGGAGATGGCTAAAAATAAAAGAAGAAGAAGAAAAAGAAA
AGAAAAAGAGACTTACCTGAAGAGGAGGAAACTGATTATGAAGTAGATATTGTCAAAAAA
GCTAAAACATCAAAATTATTACTTTGTGAAGCAATTCAAGATCATTTAAGATAAAGATAT
GCATTAATAGAAGCCAACCCTTGGTTATTAATTGTATCTGATATACCAAGAATGATTACA
GATATTGAAATTAAGGAGTTCTTCAATATTCTAATTTCTAAATTAAGACCAGAACTAGCT
GAACCCTCACCTGTTGTAAAAGTAGATGTTATGACCAATGGATAATTTGCTACTATGCAT
ATGAGTTGTAAATTGGCCAAAAGCTTTGCTCTTACTTTAAGGGGTGTTGAATTCTAAAAA
TGCAAATTGATGATAGAAAAACCCAAGCAATACTTTTTTAGGATGTATATGGAGAAATAA
TAAAATGATGATGTTATGGTAGATGTAGATGATGGTGCTTTGTAGCAAATGCAAATGAAT
AAAATTTATATGGGTGGTTTGCCTACTTATTTAAAAGACATAGATGTTAGAAAATTATGT
GAAACCTTTGGCAAATTAAAATACTTTAATGTAGCAAAACAATAAAATGAAAATAAAGAG
CAAGTTTCTAAAGGTTACTGTTTTTTTGAATACGAAGATCCAAATATCACTGAGAAAGCT
ATTAAAGCACTTAATGGTCTACCTTGTGGTGATAGAAAGTTAAAAGTTTCTAGAGTCACA
AAAGATCAAAATAAACTTGCAAATACACAATAAATTTAAAGTGAAAAAAACAAATTAGCT
CCTTCTAATAATAGTGGTAGTTTTCTAGGAGGTTCTGATTTAATTAGAAAAGACGAATTT
TAAAAGTTATTAACTATTCCGGAATTTACTTCTCTTCCAAGTAGAGTTATTCAATTATTA
AATATGGTGTCAATTGAAGATCTATTTGAAGATGACATTGTAGATGATTTATATTAAGAT
GTTATGACAGAATGCGAGAAAATAGGACCAGTTGAGAAAATAGAAATCCCAAAGCCATGC
AAAACTACAGGCATATGCCCTCCATGCATAGGAAAAGTTTTTGTTAAATTTAAATATATG
TTGAAGGCAAAGAAGGCAAGATATAGTTTGAATGGAAGAACATATAATCGTAGAACAGTA
ATAGCTTCATTTTATCCTGAGGATAAGTTTGATCGCAAAGATTTTCTTGTTTCTATTTTG
TGA>TTHERM_00525150(protein)
MDIEINQLQYNNQQGEEFKQAEEQIIEQDHRKYSSDEEEEDDEDIIQKQKNESIKDENTT
QISNQDGGDGQKQKKKKKKKRKRDLPEEEETDYEVDIVKKAKTSKLLLCEAIQDHLRQRY
ALIEANPWLLIVSDIPRMITDIEIKEFFNILISKLRPELAEPSPVVKVDVMTNGQFATMH
MSCKLAKSFALTLRGVEFQKCKLMIEKPKQYFFRMYMEKQQNDDVMVDVDDGALQQMQMN
KIYMGGLPTYLKDIDVRKLCETFGKLKYFNVAKQQNENKEQVSKGYCFFEYEDPNITEKA
IKALNGLPCGDRKLKVSRVTKDQNKLANTQQIQSEKNKLAPSNNSGSFLGGSDLIRKDEF
QKLLTIPEFTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKIEIPKPC
KTTGICPPCIGKVFVKFKYMLKAKKARYSLNGRTYNRRTVIASFYPEDKFDRKDFLVSIL>TTHERM_00525150(gene)
ATGGATATCGAAATTAATTAACTATAATATAATAATCAATAAGGAGAGGAGTTTAAGTAA
GCTGAAGAATAAATAATTGAATAGGATCATAGAAAATATTCTAGTGATGAAGAAGAGGAA
GATGATGAAGATATCATATAAAAATAAAAAAACGAATCTATCAAAGATGAGAATACTACA
TAAATAAGCAATTAAGATGGAGGAGATGGCTAAAAATAAAAGAAGAAGAAGAAAAAGAAA
AGAAAAAGAGACTTACCTGAAGAGGAGGAAACTGATTATGAAGTAGATATTGTCAAAAAA
GCTAAAACATCAAAATTATTACTTTGTGAAGCAATTCAAGATCATTTAAGATAAAGATAT
GCATTAATAGAAGCCAACCCTTGGTTATTAATTGTATCTGATATACCAAGAATGATTACA
GATATTGAAATTAAGGAGTTCTTCAATATTCTAATTTCTAAATTAAGACCAGAACTAGCT
GAACCCTCACCTGTTGTAAAAGTAGATGTTATGACCAATGGATAATTTGCTACTATGCAT
ATGAGTTGTAAATTGGCCAAAAGCTTTGCTCTTACTTTAAGGGGTGTTGAATTCTAAAAA
TGCGTAAAAATTATGATTAAAAGAAAATTTTAGAAATAAAAGAGAGAATTTATAATAAAA
TCAAGCAAAAATAAATCTTTTCAATAAAAAATATTTTTTCAAATCTAAAAAAGTGATAGA
AACACATAAATTTATAATTATAATTAATTTTATAAATAACTTCTTTTAGTTAAAAATATT
AGCTTGATTTTGTTAACTTTTTCTTCAAAAAATCTACATTTTCTTTTGAAAATGATATTA
TTTTCAAGATAAAGATTGAAATTTATTTTTAAAACATTTATTTAATTTCATATATTTTTT
ATAATATAGAAATTGATGATAGAAAAACCCAAGCAATACTTTTTTAGGATGTATATGGAG
AAATAATAAAATGATGATGTTATGGTAGATGTAGATGATGGTGCTTTGTAGCAAATGCAA
ATGAATAAAATTTATATGGGTGGTTTGCCTACTTATTTAAAAGACATAGATGTTAGAAAA
TTATGTGAAACCTTTGGCAAATTAAAATACTTTAATGTAGCAAAACAATAAAATGAAAAT
AAAGAGCAAGTTTCTAAAGGTTACTGTTTTTTTGAATACGAAGATCCAAATATCACTGAG
AAAGCTATTAAAGCACTTAATGGTCTACCTTGTGGTGATAGAAAGTTAAAAGTTTCTAGA
GTCACAAAAGATCAAAATAAACTTGCAAATACACAATAAATTTAAAGTGAAAAAAACAAA
TTAGCTCCTTCTAATAATGTAAATTGAATTCAAACATATTTTTTTATTTTAAAAACTCGT
ATAAAATAGAGTGGTAGTTTTCTAGGAGGTTCTGATTTAATTAGAAAAGACGAATTTTAA
AAGTTATTAACTATTCCGGAATTTACTTCTCTTCCAAGTAGAGTTATTCAATTATTAAAT
ATGGTGTCAATTGAAGATCTATTTGAAGATGACATTGTAGATGATTTATATTAAGATGTT
ATGACAGAATGCGAGAAAATAGGACCAGTTGAGAAAATAGAAATCCCAAAGCCATGCAAA
ACTACAGGCATATGCCCTCCATGCATAGGAAAAGTTTTTGTTAAATTTAAGTAAATTTTT
ATATCATTAAAATTATAAATTTCTAAATATCATTTGAGGTTTTTAAAGGAAATTTCTAAG
AACTTTTTATAAATAAAAAATTAAAATATATTTTTTATTTACAAAGATATATGTTGAAGG
CAAAGAAGGCAAGATATAGTTTGAATGGAAGAACATATAATCGTAGAACAGTAATAGCTT
CATTTTATCCTGAGGATAAGTTTGATCGCAAAGATTTTCTTGTTTCTATTTTGTGA