Identifiers and Description
Gene Model Identifier
TTHERM_00637170Standard Name
PRP18 (Pre-mRNA-splicing factor PRP18)Aliases
PreTt19720 | 91.m00135Description
PRP18 PRP18 Pre-mRNA processing factor-like protein putative; Pre-mRNA-splicing factorGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- spliceosomal complex (IEA) | GO:0005681
Biological Process
- RNA splicing (IEA) | GO:0008380
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.3%
TetraMine Data
TTHERM_00637170
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_03535.1 9.997093137033517e-262 Prp18 domain-containing protei
n (375 aa)
DictyBase DDB_G0274555 1.0000099287337047e-53 prp18 on chromosome: 2 positio
n 4164827 to 4165996
Oxytricha Contig7183.0.g74 1.9998745702418095e-48 Prp18 domain
WormBase WBGene00009320 1.9994920269952867e-34 status:Confirmed UniProt:O45
431 protein_id:CAB03039.2
SGD YGR006W 0.0000000000000030004923591262316 PRP18 Splicing factor involved
in the positioning of the 3 s
plice site during the second c
atalytic step of splicing, par
t of snRNP U5, interacts with
Slu7p
Stentor Coeruleus SteCoe_33148 0.000045399929762484854
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00637170(coding)
ATGAATGAGGAAGACTTCAAAAAGAAATAAAGAGAGGAAGCTGATTATATTGATGAAGAA
AAAATTTAAAAACTTTTTGCAAGGTTAAACTAACCAGAATAAAATATTAGTACTGAAAAG
GTAACTAATAAAAAGCAGTAAGAATTAGAAATAGAAAAACTTAAGCAAGTGTCTAACGAT
ACTAAAAATGAAGATATTTTAATATGGAGTTAAAAAACACTTCGTGATTGGGAGTAGAAA
TTAGAATAGAGATTCACAACTGATGAATAGAAAAAATCTGTTTTAGCAAGAAAATTAATT
GGTAATTTCCGTCAAACATCAGAGTACTTGAAACCTTTGTTTAAGCTTTTAAAAGAAAAG
AAATGTAGTTAAGATATTCTAGATGGATTATACATAGTCGTAAATTATGCATTATAAAGG
GAGTATGTAAAAGCAAATGACAAATATTTAGCCTTAGCTATTGGTAATGCTGCTTGGCCT
ATGGGTGTCACAATGGTTGGTATCCACGAAAGAGCTGGTCGTTCCAAAATTTTTAGTTCT
TAAGTTGCACATATATTAAATGATGAAACAACCAGAAAGTATTTGTAATCAATGAAGAGA
CTTGTTACAGTTTAATAGCTTATGTATCCTTCTGAAGATAAAGCTAAGATGATAAATTAT
GACACAACAATGGAGGAGTTATTTTGA>TTHERM_00637170(protein)
MNEEDFKKKQREEADYIDEEKIQKLFARLNQPEQNISTEKVTNKKQQELEIEKLKQVSND
TKNEDILIWSQKTLRDWEQKLEQRFTTDEQKKSVLARKLIGNFRQTSEYLKPLFKLLKEK
KCSQDILDGLYIVVNYALQREYVKANDKYLALAIGNAAWPMGVTMVGIHERAGRSKIFSS
QVAHILNDETTRKYLQSMKRLVTVQQLMYPSEDKAKMINYDTTMEELF>TTHERM_00637170(gene)
ATGAATGAGGAAGACTTCAAAAAGAAATAAAGAGAGGAAGCTGATTATATTGATGAAGAA
AAAATTTAAAAACTTTTTGCAAGGTTAAACTAACCAGAATAAAATATTAGTACTGAAAAG
GTAACTAATAAAAAGCAGTAAGAATTAGAAATAGAAAAACTTAAGCAAGTGTCTAACGAT
ACTAAAAATGAAGATATTTTAATATGGAGTTAAAAAACACTTCGTGATTGGGAGTAGAAA
TTAGAATAGAGATTCACAACTGATGAATAGAAAAAATCTGTTTTAGCAAGAAAATTAATT
GGTAATTTCCGTCAAACATCAGAGTACTTGAAACCTTTGTTTAAGCTTTTAAAAGAAAAG
AAATGTAGTTAAGATATTCTAGATGGATTATACATAGTCGTAAATTATGCATTATAAAGG
GAGTATGTAAAAGCAAATGACAAATATTTAGCCTTAGCTATTGGTAATGCTGCTTGGCCT
ATGGGTGTCACAATGGTTGGTATCCACGAAAGAGCTGGTCGTTCCAAAATTTTTAGTTCT
TAAGTTGCACGTAAAATTCTATTAAAATAAATTAAAATTTCTTTAAATGAAAATAATTAA
TAAAAAAGATATATTAAATGATGAAACAACCAGAAAGTATTTGTAATCAATGAAGAGACT
TGTTACAGTTTAATAGCTTATGTATCCTTCTGAAGATAAAGCTAAGATGATAAATTATGA
CAGTAAATATTTTTTTAATTTAAATAAAATAATATTAATCTATATTTTAAATAATTAGCA
ACAATGGAGGAGTTATTTTGA