Identifiers and Description

Gene Model Identifier

TTHERM_00046730

Standard Name

PHR2 (PHotolyase Repair 2)

Aliases

PreTt11152 | 3.m01856 | 3824.m02913

Description

FAD binding domain of DNA photolyase family protein; utilizes blue light to repair DNA function

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• DNA photolyase activity (IEA) | GO:0003913

Biological Process

• DNA repair (IEA) | GO:0006281

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00046730

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_01777.1	9.997093137033517e-262	FAD binding domain-DNA photoly ase (489 aa)
SGD	YOR386W	1.9994274381022833e-63	PHR1 DNA photolyase involved i n photoreactivation, repairs p yrimidine dimers in the presen ce of visible light; induced b y DNA damage; regulated by tra nscriptional repressor Rph1p
Oxytricha	Contig17048.0.g64	2.0003218023735366e-33	FAD binding domain of DNA phot olyase

General Information

No Data fetched for General Information

Associated Literature

1. Ref:SUPR000179
2. Ref:SUPR000169

Sequences

>TTHERM_00046730(coding)
ATGAGCTAGAATAAAAATCAATATAAAAAAGAAGAATATCCCTTAAAAACCTCTAAAAGA
AAGAGGGAAGCATTTGAGGAAGGATAAGCTGAGTCAAAGATGATTGAAGAAGATGATGGA
AAATCAAGTAAAAAATAACAAGACAAAAACGCTAAGCAAAAGAGGAAAGTTAGCATATTC
TGGTTTAGAAGAGATCTTAGATTAAACGATAACACTGCTTTATATAACGCCTTAAAGTCT
CAAAATGAAGTTGTACCTTTGTTTATTTTTGACACTGAAATTTTAGACAAATTAGAAGAT
AAAAAAGACGCTCGAGTTGAATTCATACACTTATATATTATGAAAATCTAAGAATAACTA
AAATAAGTTGGATCTACCCTAATTGTGAAACATGGTACAGTTGACAATGCTTTTAAAGAG
CTTGTTTCGGAGTTTGATATTTAAAGTGTTTATGTAAATAGAGATTATGAATCTTCTGCT
AAATAAAGAGATGAAAGGATTAAAAAATATGTCAAATAATCAGCAAATGCTGAGTTTTAC
GATTTTAAGGATCAAGTTATTTTTGAAGCCAGTTCAACCAATAAAGATGGATCACCTTAT
AAAGTTTTCACACCATATAGCAAAAAATGGCTGAGTATATTGACTTCAGAAGACTACTCT
TGTAGACCTTCTGAATCATTAATGGAAAAATTTTGGAAATCTCCTGAAAGAAAAGTTATG
AGTTTAGAAGAAATTGGATTTGAGAAAGCAGGAATTCCTTTTCCATCTGTTGAGTTGAAT
GAAAAAATTGTTAAGAATTATGATAAGACTCGTGATACACCTTCAATAGAAGGTACCACG
AGAATGAGTGTTCATTTAAGATTTGGTACAGTTTCAATTAGGGATTTAGTTAGGAGATCA
AAAGGTTTAAATGCTACATATCTAAATGAACTTATATGGCGTGATTTTTATATGATGATT
TTAGATTAATTTCCACATGTAGAGAACAATAATTTTAAACCAGCATATGATAAACTAGTT
TGGAGAAATAATGTAGATGAATTTATGGCTTGGTGCGAAGGCAAAACAGGATATCATTTG
GTTGATGCTGGAATGAGATAATTAAATTAGACAGGTTATATGCATAATAGAGTTAGAATG
GTTGTAGCAAGCTTCTTAACAAAGCATTTATTAATTGATTGGAAATGGGGTGAAAGATAT
TTTGCCTCTAAACTTTTAGATTATGACTTATCTGCAAATAATGGTGGATGGCAATGGGCA
GCAGGAACAGGTACAGATGCTTAACCTTATTTTAGAATATTTAATCCTGATAGCTAATAA
AAAAAATTTGATCCTAATTATACTTATATTAAAACATGGATAAAAGATTTAAATACTAAA
ACATATCCCAAGCCTATTGTTGACCATAAATTGGCAAGAGAGCGTTGCTTATAAGCTTTC
AAAAAAGCTTTAGGATAATGA

>TTHERM_00046730(protein)
MSQNKNQYKKEEYPLKTSKRKREAFEEGQAESKMIEEDDGKSSKKQQDKNAKQKRKVSIF
WFRRDLRLNDNTALYNALKSQNEVVPLFIFDTEILDKLEDKKDARVEFIHLYIMKIQEQL
KQVGSTLIVKHGTVDNAFKELVSEFDIQSVYVNRDYESSAKQRDERIKKYVKQSANAEFY
DFKDQVIFEASSTNKDGSPYKVFTPYSKKWLSILTSEDYSCRPSESLMEKFWKSPERKVM
SLEEIGFEKAGIPFPSVELNEKIVKNYDKTRDTPSIEGTTRMSVHLRFGTVSIRDLVRRS
KGLNATYLNELIWRDFYMMILDQFPHVENNNFKPAYDKLVWRNNVDEFMAWCEGKTGYHL
VDAGMRQLNQTGYMHNRVRMVVASFLTKHLLIDWKWGERYFASKLLDYDLSANNGGWQWA
AGTGTDAQPYFRIFNPDSQQKKFDPNYTYIKTWIKDLNTKTYPKPIVDHKLARERCLQAF
KKALGQ

>TTHERM_00046730(gene)
ATGAGCTAGAATAAAAATCAATATAAAAAAGAAGAATATCCCTTAAAAACCTCTAAAAGA
AAGAGGGAAGCATTTGAGGAAGGATAAGCTGAGTCAAAGATGATTGAAGAAGATGATGGA
AAATCAAGTAAAAAATAACAAGACAAAAACGCTAAGCAAAAGTATGTTTTTATATAATTT
TTATAATTAAAAAAGAAATCTAAAAGTAGAAAGAAATCATGTAGAATTTACATAAAATTA
AAATACCGAAACATATTTTTAATAGAACTTAAACTTTTTTCTTAAATGCTACTTAATAAT
ATTATTTCCATTCAATTAACAACAATATTAGGAGGAAAGTTAGCATATTCTGGTTTAGAA
GAGATCTTAGATTAAACGATAACACTGCTTTATATAACGCCTTAAAGTCTCAAAATGAAG
TTGTACCTTTGTTTATTTTTGACACTGAAATTTTAGACAAATTAGAAGATAAAAAAGACG
CTCGAGTTGAATTCATACACTTATATATTATGAAAATCTAAGAATAACTAAAATAAGTTG
GATCTACCCTAATTGTGAAACATGGTACAGTTGACAATGCTTTTAAAGAGCTTGTTTCGG
AGTTTGATATTTAAAGTGTTTATGTAAATAGAGATTATGAATCTTCTGCTAAATAAAGAG
ATGAAAGGATTAAAAAATATGTCAAATAATCAGCAAATGCTGAGTTTTACGATTTTAAGG
ATCAAGTTATTTTTGAAGCCAGTTCAACCAATAAAGATGGATCACCTTATAAAGTTTTCA
CACCATATAGCAAAAAATGGCTGAGTATATTGACTTCAGAAGACTACTCTTGTAGACCTT
CTGAATCATTAATGGAAAAATTTTGGAAATCTCCTGAAAGAAAAGTTATGAGTTTAGAAG
AAATTGGATTTGAGAAAGCAGGAATTGTAATCTTTTTTATTAAATATTTAATTAATTATA
AAAAAAAACAGATAGAATAAATAAATTATTCATAAAAATTAATTAATTTAAAATATAAAG
CCTTTTCCATCTGTTGAGTTGAATGAAAAAATTGTTAAGAATTATGATAAGACTCGTGAT
ACACCTTCAATAGAAGGTACCACGAGAATGAGTGTTCATTTAAGATTTGGTACAGTTTCA
ATTAGGGATTTAGTTAGGAGATCAAAAGGTTTAAATGCTACATATCTAAATGAACTTATA
TGGCGTGATTTTTATATGATGATTTTAGATTAATTTCCACATGTAGAGAACAATAATTTT
AAACCAGCATATGATAAACTAGTTTGGAGAAATAATGTAGATGAATTTATGGCTTGGTGC
GAAGGCAAAACAGGTAAAATGTCATTTTATTAATATAATTATTTAAATTATTATTCTTTT
TAGAAATTAAATTAAATTACTTAATTAGTTAGTTAGCTTACAAGCTTAAGAAAATAATTT
TATAACATTTAGCTAATTAAAATTTATTTATAAAGCATTTTTAAATATAATTTAAAGGAT
ATCATTTGGTTGATGCTGGAATGAGATAATTAAATTAGACAGGTTATATGCATAATAGAG
TTAGAATGGTTGTAGCAAGCTTCTTAACAAAGCATTTATTAATTGATTGGAAATGGGGTG
AAAGATATTTTGCCTCTAAACTTTTAGATTATGACTTATCTGCAAATAATGGTGGATGGC
AATGGGCAGCAGGAACAGGTACAGATGCTTAACCTTATTTTAGAATATTTAATCCTGATA
GCTAATAAAAAAAATTTGATCCTAATTATACTTATATTAAAACATGGATAAAAGATTTAA
ATACTAAAACATATCCCAAGCCTATTGTTGACCATAAATTGGCAAGAGAGCGTTGCTTAT
AAGCTTTCAAAAAAGCTTTAGGATAATGA