Identifiers and Description

Gene Model Identifier

TTHERM_00046730

Standard Name

PHR2 (PHotolyase Repair 2)

Aliases

PreTt11152 | 3.m01856 | 3824.m02913

Description

FAD binding domain of DNA photolyase family protein; utilizes blue light to repair DNA function

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00046730

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_01777.19.997093137033517e-262FAD binding domain-DNA photoly
ase (489 aa)
SGDYOR386W1.9994274381022833e-63PHR1 DNA photolyase involved i
n photoreactivation, repairs p
yrimidine dimers in the presen
ce of visible light; induced b
y DNA damage; regulated by tra
nscriptional repressor Rph1p
OxytrichaContig17048.0.g642.0003218023735366e-33FAD binding domain of DNA phot
olyase

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:SUPR000179
  2. Ref:SUPR000169

Sequences 

>TTHERM_00046730(coding)
ATGAGCTAGAATAAAAATCAATATAAAAAAGAAGAATATCCCTTAAAAACCTCTAAAAGA
AAGAGGGAAGCATTTGAGGAAGGATAAGCTGAGTCAAAGATGATTGAAGAAGATGATGGA
AAATCAAGTAAAAAATAACAAGACAAAAACGCTAAGCAAAAGAGGAAAGTTAGCATATTC
TGGTTTAGAAGAGATCTTAGATTAAACGATAACACTGCTTTATATAACGCCTTAAAGTCT
CAAAATGAAGTTGTACCTTTGTTTATTTTTGACACTGAAATTTTAGACAAATTAGAAGAT
AAAAAAGACGCTCGAGTTGAATTCATACACTTATATATTATGAAAATCTAAGAATAACTA
AAATAAGTTGGATCTACCCTAATTGTGAAACATGGTACAGTTGACAATGCTTTTAAAGAG
CTTGTTTCGGAGTTTGATATTTAAAGTGTTTATGTAAATAGAGATTATGAATCTTCTGCT
AAATAAAGAGATGAAAGGATTAAAAAATATGTCAAATAATCAGCAAATGCTGAGTTTTAC
GATTTTAAGGATCAAGTTATTTTTGAAGCCAGTTCAACCAATAAAGATGGATCACCTTAT
AAAGTTTTCACACCATATAGCAAAAAATGGCTGAGTATATTGACTTCAGAAGACTACTCT
TGTAGACCTTCTGAATCATTAATGGAAAAATTTTGGAAATCTCCTGAAAGAAAAGTTATG
AGTTTAGAAGAAATTGGATTTGAGAAAGCAGGAATTCCTTTTCCATCTGTTGAGTTGAAT
GAAAAAATTGTTAAGAATTATGATAAGACTCGTGATACACCTTCAATAGAAGGTACCACG
AGAATGAGTGTTCATTTAAGATTTGGTACAGTTTCAATTAGGGATTTAGTTAGGAGATCA
AAAGGTTTAAATGCTACATATCTAAATGAACTTATATGGCGTGATTTTTATATGATGATT
TTAGATTAATTTCCACATGTAGAGAACAATAATTTTAAACCAGCATATGATAAACTAGTT
TGGAGAAATAATGTAGATGAATTTATGGCTTGGTGCGAAGGCAAAACAGGATATCATTTG
GTTGATGCTGGAATGAGATAATTAAATTAGACAGGTTATATGCATAATAGAGTTAGAATG
GTTGTAGCAAGCTTCTTAACAAAGCATTTATTAATTGATTGGAAATGGGGTGAAAGATAT
TTTGCCTCTAAACTTTTAGATTATGACTTATCTGCAAATAATGGTGGATGGCAATGGGCA
GCAGGAACAGGTACAGATGCTTAACCTTATTTTAGAATATTTAATCCTGATAGCTAATAA
AAAAAATTTGATCCTAATTATACTTATATTAAAACATGGATAAAAGATTTAAATACTAAA
ACATATCCCAAGCCTATTGTTGACCATAAATTGGCAAGAGAGCGTTGCTTATAAGCTTTC
AAAAAAGCTTTAGGATAATGA


>TTHERM_00046730(protein)
MSQNKNQYKKEEYPLKTSKRKREAFEEGQAESKMIEEDDGKSSKKQQDKNAKQKRKVSIF
WFRRDLRLNDNTALYNALKSQNEVVPLFIFDTEILDKLEDKKDARVEFIHLYIMKIQEQL
KQVGSTLIVKHGTVDNAFKELVSEFDIQSVYVNRDYESSAKQRDERIKKYVKQSANAEFY
DFKDQVIFEASSTNKDGSPYKVFTPYSKKWLSILTSEDYSCRPSESLMEKFWKSPERKVM
SLEEIGFEKAGIPFPSVELNEKIVKNYDKTRDTPSIEGTTRMSVHLRFGTVSIRDLVRRS
KGLNATYLNELIWRDFYMMILDQFPHVENNNFKPAYDKLVWRNNVDEFMAWCEGKTGYHL
VDAGMRQLNQTGYMHNRVRMVVASFLTKHLLIDWKWGERYFASKLLDYDLSANNGGWQWA
AGTGTDAQPYFRIFNPDSQQKKFDPNYTYIKTWIKDLNTKTYPKPIVDHKLARERCLQAF
KKALGQ


>TTHERM_00046730(gene)
ATGAGCTAGAATAAAAATCAATATAAAAAAGAAGAATATCCCTTAAAAACCTCTAAAAGA
AAGAGGGAAGCATTTGAGGAAGGATAAGCTGAGTCAAAGATGATTGAAGAAGATGATGGA
AAATCAAGTAAAAAATAACAAGACAAAAACGCTAAGCAAAAGTATGTTTTTATATAATTT
TTATAATTAAAAAAGAAATCTAAAAGTAGAAAGAAATCATGTAGAATTTACATAAAATTA
AAATACCGAAACATATTTTTAATAGAACTTAAACTTTTTTCTTAAATGCTACTTAATAAT
ATTATTTCCATTCAATTAACAACAATATTAGGAGGAAAGTTAGCATATTCTGGTTTAGAA
GAGATCTTAGATTAAACGATAACACTGCTTTATATAACGCCTTAAAGTCTCAAAATGAAG
TTGTACCTTTGTTTATTTTTGACACTGAAATTTTAGACAAATTAGAAGATAAAAAAGACG
CTCGAGTTGAATTCATACACTTATATATTATGAAAATCTAAGAATAACTAAAATAAGTTG
GATCTACCCTAATTGTGAAACATGGTACAGTTGACAATGCTTTTAAAGAGCTTGTTTCGG
AGTTTGATATTTAAAGTGTTTATGTAAATAGAGATTATGAATCTTCTGCTAAATAAAGAG
ATGAAAGGATTAAAAAATATGTCAAATAATCAGCAAATGCTGAGTTTTACGATTTTAAGG
ATCAAGTTATTTTTGAAGCCAGTTCAACCAATAAAGATGGATCACCTTATAAAGTTTTCA
CACCATATAGCAAAAAATGGCTGAGTATATTGACTTCAGAAGACTACTCTTGTAGACCTT
CTGAATCATTAATGGAAAAATTTTGGAAATCTCCTGAAAGAAAAGTTATGAGTTTAGAAG
AAATTGGATTTGAGAAAGCAGGAATTGTAATCTTTTTTATTAAATATTTAATTAATTATA
AAAAAAAACAGATAGAATAAATAAATTATTCATAAAAATTAATTAATTTAAAATATAAAG
CCTTTTCCATCTGTTGAGTTGAATGAAAAAATTGTTAAGAATTATGATAAGACTCGTGAT
ACACCTTCAATAGAAGGTACCACGAGAATGAGTGTTCATTTAAGATTTGGTACAGTTTCA
ATTAGGGATTTAGTTAGGAGATCAAAAGGTTTAAATGCTACATATCTAAATGAACTTATA
TGGCGTGATTTTTATATGATGATTTTAGATTAATTTCCACATGTAGAGAACAATAATTTT
AAACCAGCATATGATAAACTAGTTTGGAGAAATAATGTAGATGAATTTATGGCTTGGTGC
GAAGGCAAAACAGGTAAAATGTCATTTTATTAATATAATTATTTAAATTATTATTCTTTT
TAGAAATTAAATTAAATTACTTAATTAGTTAGTTAGCTTACAAGCTTAAGAAAATAATTT
TATAACATTTAGCTAATTAAAATTTATTTATAAAGCATTTTTAAATATAATTTAAAGGAT
ATCATTTGGTTGATGCTGGAATGAGATAATTAAATTAGACAGGTTATATGCATAATAGAG
TTAGAATGGTTGTAGCAAGCTTCTTAACAAAGCATTTATTAATTGATTGGAAATGGGGTG
AAAGATATTTTGCCTCTAAACTTTTAGATTATGACTTATCTGCAAATAATGGTGGATGGC
AATGGGCAGCAGGAACAGGTACAGATGCTTAACCTTATTTTAGAATATTTAATCCTGATA
GCTAATAAAAAAAATTTGATCCTAATTATACTTATATTAAAACATGGATAAAAGATTTAA
ATACTAAAACATATCCCAAGCCTATTGTTGACCATAAATTGGCAAGAGAGCGTTGCTTAT
AAGCTTTCAAAAAAGCTTTAGGATAATGA