Identifiers and Description

Gene Model Identifier

TTHERM_00455610

Standard Name

NUP88 (NUcleoPorin 88)

Aliases

PreTt20290 | 53.m00192 | 3712.m00053

Description

hypothetical protein; Nucleoporin protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00261 ) Tropomyosin
• ( TIGR00162 ) conserved hypothetical protein TIGR00162

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.7%

TetraMine Data

TTHERM_00455610

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Stentor Coeruleus	SteCoe_36368	0
Tetrahymena borealis	EI9_13753.1	9.997093137033517e-262	hypothetical protein (937 aa)
DictyBase	DDB_G0279039	0.000019995566179747357	DDB_G0279039 on chromosome: 3 position 1541078 to 1544303

General Information

No Data fetched for General Information

Associated Literature

1. Ref:28386019: Iwamoto M, Osakada H, Mori C, Fukuda Y, Nagao K, Obuse C, Hiraoka Y, Haraguchi T (2017) Compositionally distinct nuclear pore complexes of functionally distinct dimorphic nuclei in the ciliate Tetrahymena. Journal of cell science 130(10):1822-1834

Sequences

>TTHERM_00455610(coding)
ATGGAGAATAACCTTTTAGAATCAAGACTAAATAAAATCTTGTCAGATAAAAAGTTTAGC
AAATTGAATAAAAGCATAGAGAAGCATCTCAATAAGGAAACAGGCATTTTTATTAAGGAC
TACTTTTTAGTTCTTGAATATGAATCACTTGATGAAAAGGTAATTCAGAGTAAAAAGAAG
GAGCTTTTAGAAAATTCAATGCACGATCATATAGAAAAAGATGACGATTCTGTTTAATAC
TTTGCACTATACTTATGGATTTTTAATTTGACTGCAGGCCAATTCTTAGAAAATAACGAA
AATAAATTAGCTACTAGAATACCTGTAAATTTACAAAGTTACAACATGTTCAATGCACAA
GATTAATAAATATAGTCTGCCAAAAACACAATCGAAAGCTTTGGTAACGTCTTTTGCATG
TCTAAGAAAATCGGAGAGTAATCTCTCTAAATAATAAATAGTAATATAGATGAATACTAA
ATAGCAATTTATTCTGAAAAATAAATTTTTGTTGGCCATATTGAAAACATTATAAATTCC
TATTTTATTAAGCAAAGCAAAGATGATCAAAATGCCTTTACAATGTACCGTGTATAATTA
TTTATATAAAAATACTCTCCAAGCATTTTAAGCATTAAATTCCACAAATTATCTCCTCAT
CATTTGGCTGTTCTTTTAGATGATTAGTACTTTTGCGTTTATAATCTGCAATCTAGTCTT
TCTTACTAGGAGGTGTAATTTAATCTTTAATAACTTCCACGCTTTGGTAGAAACGAAGAG
TATAATTATTAAGAAAAAGGATAAGTTTAGTTTGTTGATTTCGAATTTGGAGGCAACAGC
TTTTTCACTAGCTATTCGAAAACCAATTTCTAAATTCCTTCTGATTTCGATTTTCTGTCA
GTATATTTTCTTACTGAAGATGGTTAAATTTACTACCAATCTCCATTTTTAGTAAAAGAT
ATGAGAATTAACAGATAATTAATTGAAGAACTTAAGGATTATCTTGTTCAAGAATTAAAA
TTGGTGGAACAGCATGAATAAATATAAGAAAAATTATAGGTGTTAAAATCTTATTTAGAC
TTAGTAGAATAAATTGACAGCAGAGATTTGATAAGTGAATGCGAATAACCTACCAAATTA
TCTAAAATAGTTACTCAAACAGATAAGTCCAGTTCATTTGAAGTTCCTATTTTTAATAGC
ATCAGCATGCAAGACTTGCTGAATGATGATTTCTAAATACAATTAAGATATGTTCCTACA
GAATAAAATAACGAAGATGATTAAGAAAATTTAGAAAATAACAGTAACTTACAGTCTCAG
TTTAAATCAAGTGGCTTTGGAACAAAATCTAACATCTAAGTTTTTTCAAAATCGTTAATG
GACAGATTTACTAGAGATAATAAGAATCAAATTATGTATAGGAAATATAGTAAATTCCAC
AAAGTGGAAACAAAGGGTTAACTCCATGTCTTTATTTTAACAAAGCAAATCGGTAATAAA
ACTTACTCTACTGTATCTTCACGTTTTAGTCCTCTTCCAGTCATGCCTACTCATATTGTT
CAAGACTTTTACTAGTTTTGTCTTTTATCTGGTGAAAAAGCACATCTTGAATGCCCATTA
AGCTCTTTAATCAACTATACAGGAAATTAATCTAAAAAGAATATCTATGAATATAAATAA
AATTAATGTGCTAGACTCTGTTCTAAGGCAATTGAAACATCAACACTTGACAGTGTTTGC
TTCTAACTTATGAATAGAATATATTGTATTAACTTTAAGTGGATTTAGAATTTGATTTTA
ACAAACTTATCAGACCCTAAAGTATTTAATGATGAAGAATTGTCTAGAAGTGAAATTAGA
GTCTTAGTTGATTCTCAGCAAATCGATAGCTAGGATAAATTAGATGCATGTAAATTAACA
GATTTATCTTTTTATTGCTTATCTGAAAAAGACAGAATGCTTCTAGCAGTTATTCCTTCC
CACCACTCACAATAGTAATAGCCTTTTAGGTTAAAATGCTTAACTTTAGACTTCTTGTCA
AACTATATTTAAATTTAAAAGAGTGCTAAGCTTATATCTGAGACTTTACACAAGATGATT
AAAGAATAAGTAGAGCCTGAAAAAGCAAAAGAAAATAACCAATCAGGATAAAAACTAGCT
TAAAATGATGTGAAGCTTCAGGAAATTGCTGATTAAGATAATAAAGTAGATCTTGATAAC
TTTTAAAAGTAAGTAACAGCTTACATAAGCAAGCATGAAGAAGTTTTATAATAGAATATT
TAGTTAATACAAATTAAATATCAAGAGGTATTAAAGAAAAAAGAAGAGTTGAAAAATACA
AAGGAAAAAACAGAAAGCCAATTTTATGAAATCATAGAAAACAAATAAAAGAAGTTGTTA
GAAAGCAAAAAAAGAATTGAAGAAAAAAATAAGTCAATCAATTAAAAAATTTAAGAAATT
GCTTAAAAATTAAAAGACCCTAAAGCTTCAAATGAATTAGACAATGTTAAAGAAGCAAAT
ATCACATTTAATGAAAAATATAATGAGTAAATTAAGACATACTATAATAAACTTAAAGAA
ATCGAAGAATAATACTAAAAGTACTTCAAAACTAGAAGTGAGTTCTTCAATTCATTAGGT
GTTCAAAGCAATACAAACCTACAAATTGATGAAAACACTTTATAAAAAATTAATGAAACA
AGAAATAAGCTAAAATACCACATGAAAATCCTTGATAATTAGATCATTTAAACCAATCCT
CAAGATAATTGA

>TTHERM_00455610(protein)
MENNLLESRLNKILSDKKFSKLNKSIEKHLNKETGIFIKDYFLVLEYESLDEKVIQSKKK
ELLENSMHDHIEKDDDSVQYFALYLWIFNLTAGQFLENNENKLATRIPVNLQSYNMFNAQ
DQQIQSAKNTIESFGNVFCMSKKIGEQSLQIINSNIDEYQIAIYSEKQIFVGHIENIINS
YFIKQSKDDQNAFTMYRVQLFIQKYSPSILSIKFHKLSPHHLAVLLDDQYFCVYNLQSSL
SYQEVQFNLQQLPRFGRNEEYNYQEKGQVQFVDFEFGGNSFFTSYSKTNFQIPSDFDFLS
VYFLTEDGQIYYQSPFLVKDMRINRQLIEELKDYLVQELKLVEQHEQIQEKLQVLKSYLD
LVEQIDSRDLISECEQPTKLSKIVTQTDKSSSFEVPIFNSISMQDLLNDDFQIQLRYVPT
EQNNEDDQENLENNSNLQSQFKSSGFGTKSNIQVFSKSLMDRFTRDNKNQIMYRKYSKFH
KVETKGQLHVFILTKQIGNKTYSTVSSRFSPLPVMPTHIVQDFYQFCLLSGEKAHLECPL
SSLINYTGNQSKKNIYEYKQNQCARLCSKAIETSTLDSVCFQLMNRIYCINFKWIQNLIL
TNLSDPKVFNDEELSRSEIRVLVDSQQIDSQDKLDACKLTDLSFYCLSEKDRMLLAVIPS
HHSQQQQPFRLKCLTLDFLSNYIQIQKSAKLISETLHKMIKEQVEPEKAKENNQSGQKLA
QNDVKLQEIADQDNKVDLDNFQKQVTAYISKHEEVLQQNIQLIQIKYQEVLKKKEELKNT
KEKTESQFYEIIENKQKKLLESKKRIEEKNKSINQKIQEIAQKLKDPKASNELDNVKEAN
ITFNEKYNEQIKTYYNKLKEIEEQYQKYFKTRSEFFNSLGVQSNTNLQIDENTLQKINET
RNKLKYHMKILDNQIIQTNPQDN

>TTHERM_00455610(gene)
ATGGAGAATAACCTTTTAGAATCAAGACTAAATAAAATCTTGTCAGATAAAAAGTTTAGC
AAATTGAATAAAAGCATAGAGAAGCATCTCAATAAGGAAACAGGCATTTTTATTAAGGAC
TACTTTTTAGTTCTTGAATATGAATCACTTGATGAAAAGGTAATTCAGAGTAAAAAGAAG
GAGCTTTTAGAAAATTCAATGCACGATCATATAGAAAAAGATGACGATTCTGTTTAATAC
TTTGCACTATACTTATGGATTTTTAATTTGACTGCAGGCCAATTCTTAGAAAATAACGAA
AATAAATTAGCTACTAGAATACCTGTAAATTTACAAAGTTACAACATGTTCAATGCACAA
GATTAATAAATATAGTCTGCCAAAAACACAATCGAAAGCTTTGGTAACGTCTTTTGCATG
TCTAAGAAAATCGGAGAGTAATCTCTCTAAATAATAAATAGTAATATAGATGAATACTAA
ATAGCAATTTATTCTGAAAAATAAATTTTTGTTGGCCATATTGAAAACATTATAAATTCC
TATTTTATTAAGCAAAGCAAAGATGATCAAAATGCCTTTACAATGTACCGTGTATAATTA
TTTATATAAAAATACTCTCCAAGCATTTTAAGCATTAAATTCCACAAATTATCTCCTCAT
CATTTGGCTGTTCTTTTAGATGATTAGTACTTTTGCGTTTATAATCTGCAATCTAGTCTT
TCTTACTAGGAGGTGTAATTTAATCTTTAATAACTTCCACGCTTTGGTAGAAACGAAGAG
TATAATTATTAAGAAAAAGGATAAGTTTAGTTTGTTGATTTCGAATTTGGAGGCAACAGC
TTTTTCACTAGCTATTCGAAAACCAATTTCTAAATTCCTTCTGATTTCGATTTTCTGTCA
GTATATTTTCTTACTGAAGATGGTTAAATTTACTACCAATCTCCATTTTTAGTAAAAGAT
ATGAGAATTAACAGATAATTAATTGAAGAACTTAAGGATTATCTTGTTCAAGAATTAAAA
TTGGTGGAACAGCATGAATAAATATAAGAAAAATTATAGGTGTAAGCAATTAAACTACTT
TCATTCTATAATATATAAGTTTTAAATATGTTTATTAGAGTTTTGAGTTTTAAAAAATAA
AAATATTTTATTTAATTAAAAGGTTAAAATCTTATTTAGACTTAGTAGAATAAATTGACA
GCAGAGATTTGATAAGTGAATGCGAATAACCTACCAAATTATCTAAAATAGTTACTCAAA
CAGATAAGTCCAGTTCATTTGAAGTTCCTATTTTTAATAGCATCAGCATGCAAGACTTGC
TGAATGATGATTTCTAAATACAATTAAGATATGTTCCTACAGAATAAAATAACGAAGATG
ATTAAGAAAATTTAGAAAATAACAGTAACTTACAGTCTCAGTTTAAATCAAGTGGCTTTG
GAACAAAATCTAACATCTAAGTTTTTTCAAAATCGTTAATGGACAGATTTACTAGAGATA
ATAAGAATCAAATTATGTATAGGAAATATAGTAAATTCCACAAAGTGGAAACAAAGGGTT
AACTCCATGTCTTTATTTTAACAAAGCAAATCGGTAATAAAACTTACTCTACTGTATCTT
CACGTTTTAGTCCTCTTCCAGTCATGCCTACTCATATTGTTCAAGACTTTTACTAGTTTT
GTCTTTTATCTGGTGAAAAAGCACATCTTGAATGCCCATTAAGCTCTTTAATCAACTATA
CAGGAAATTAATCTAAAAAGAATATCTATGAATATAAATAAAATTAATGTGCTAGACTCT
GTTCTAAGGCAATTGAAACATCAACACTTGACAGTGTTTGCTTCTAACTTATGAATAGAA
TATATTGTATTAACTTTAAGTGGATTTAGAATTTGATTTTAACAAACTTATCAGACCCTA
AAGTATTTAATGATGAAGAATTGTCTAGAAGTGAAATTAGAGTCTTAGTTGATTCTCAGC
AAATCGATAGCTAGGATAAATTAGATGCATGTAAATTAACAGATTTATCTTTTTATTGCT
TATCTGAAAAAGACAGAATGCTTCTAGCAGTTATTCCTTCCCACCACTCACAATAGTAAT
AGCCTTTTAGGTTAAAATGCTTAACTTTAGACTTCTTGTCAAACTATATTTAAATTTAAA
AGAGTGCTAAGCTTATATCTGAGACTTTACACAAGATGATTAAAGAATAAGTAGAGCCTG
AAAAAGCAAAAGAAAATAACCAATCAGGATAAAAACTAGCTTAAAATGATGTGAAGCTTC
AGGAAATTGCTGATTAAGATAATAAAGTAGATCTTGATAACTTTTAAAAGTAAGTAACAG
CTTACATAAGCAAGCATGAAGAAGTTTTATAATAGAATATTTAGTTAATACAAATTAAAT
ATCAAGAGGTATTAAAGAAAAAAGAAGAGTTGAAAAATACAAAGGAAAAAACAGAAAGCC
AATTTTATGAAATCATAGAAAACAAATAAAAGAAGTTGTTAGAAAGCAAAAAAAGAATTG
AAGAAAAAAATAAGTCAATCAATTAAAAAATTTAAGAAATTGCTTAAAAATTAAAAGACC
CTAAAGCTTCAAATGAATTAGACAATGTTAAAGAAGCAAATATCACATTTAATGAAAAAT
ATAATGAGTAAATTAAGACATACTATAATAAACTTAAAGAAATCGAAGAATAATACTAAA
AGTACTTCAAAACTAGAAGTGAGTTCTTCAATTCATTAGGTGTTCAAAGCAATACAAACC
TACAAATTGATGAAAACACTTTATAAAAAATTAATGAAACAAGAAATAAGCTAAAATACC
ACATGAAAATCCTTGATAATTAGATCATTTAAACCAATCCTCAAGATAATTGA