Identifiers and Description
Gene Model Identifier
TTHERM_01106120Standard Name
NTG1 (eNdonuclease Three-like Glycosylase)Aliases
PreTt04526 | 236.m00030 | 3800.m00152Description
NTG1 base excision DNA repair protein HhH-GPD family protein; HhH-GPD superfamily base excision DNA repair protein; similar to yeast NTG1- a DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair; contains an endonuclease C3 domain and an Fe-sulfur binding domainGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
Molecular Function
- DNA binding (IEA) | GO:0003677
Biological Process
- base-excision repair (IEA) | GO:0006284
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.3%
TetraMine Data
TTHERM_01106120
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_20657.1 1.999807452113044e-171 HhH-GPD superfamily base excis
ion DNA repair protein (376 aa
)
DictyBase DDB_G0277247 7.000176714425793e-58 apnB on chromosome: 2 position
7816486 to 7817535
WormBase WBGene00011201 9.997652352281279e-57 locus:nth-1 Probable endonuc
lease III homolog status:Con
firmed UniProt:P54137 prot
ein_id:CBK55598.1
Oxytricha Contig9879.0.0.g14 1.9992362000979228e-56 HhH-GPD superfamily base excis
ion DNA repair protein
SGD YAL015C 4.001416569413617e-37 NTG1 DNA N-glycosylase and apu
rinic/apyrimidinic (AP) lyase
involved in base excision repa
ir; acts in both nucleus and m
itochondrion; creates a double
-strand break at mtDNA origins
that stimulates replication i
n response to oxidative stress
Stentor Coeruleus SteCoe_29630 1.185064864233981e-27
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_01106120(coding)
ATGCCTCCAAAACAATAAAAAACCAAAAAAAATAAAAAAGCTGTTGATTTGCCAGAAAAT
GATAAAGATAAAGAAGAAATACTCGAGAATATTAAGATTACAGAATAAAATGATGAATTA
AAATCTGAAATAGATAGCTTGGATTAATTTAAATTTTAAAAAGAAGAAGTGAACAATCCC
ATTAAAAAAACAAGAAAGCAAAAATTATAAATAGAATATGAATAAAGTGTTAATAAAGTT
GAAAGAGCTTCCAGAAAAAAATTATTAGATAAAAACATTGATGAAGATGATAAAAATTAA
AAATAGCAAACAAATAATTAATTAGACAATTAAAATGGCAATGAAGAGAAAAGTGAATAA
GTAAAAAATTAATCTGAAGAAAATAATAATTAGAATGAATAAAAGAAAAAGGGAAAGTAT
AATTGTAGAGAAAATTATGAAGAAATTTACAGTTTAATAAAAGGATATAGAGATACTCAT
ACAGCTCCAGTAGATACTTTAGGATGTGATCTCTAAGGGGATGAATCTTTACCAACAAAT
GATAGAAATTTTTAAAAATTAATGGCAATTATATTGAGTGTATAGACAAAAGATGAAACA
ACTGACCTAGTAATGAAGAAAGTAGTAAAAGAGAAAATAACTATTGATAAAGCCGTTGAA
ATTCCATCGAGCGAATTAAAAGAAATAATTAAATAAGTTAACTTTAATGGAAAAAAAGTA
GAATATATTAAGAACGCAGCAGAAGTTATAAAAAATACATATAACTATGTTATACCTGAT
TAGTATGAAGATTTAATTAAAATCAAGGGAATAGGTCCAAAAGTTGCAAATTTATTTTTG
TAATGTGCATATAATAAAACTGTAGGAATAGCTGTAGACACGCATGTTCATAGAATATCT
AATAGGCTTGAATGGGTTTCAACAAAAACTCCTGAATAAACTCGAATTGAATTAGAAAAA
TTGCTTGATAAAAAGTATTGGGAAGATGTAAACAATCTGTTAGTTGGATATGGTTAATCA
GTTTGTAAGCCTTAAAATCCCTAGTGCTAAATATGTCCTGTAAAAGATAAGTGTCCTGAG
GGTAGAAGAAGATTAAAAGGAAAGAAAAAAATATGA>TTHERM_01106120(protein)
MPPKQQKTKKNKKAVDLPENDKDKEEILENIKITEQNDELKSEIDSLDQFKFQKEEVNNP
IKKTRKQKLQIEYEQSVNKVERASRKKLLDKNIDEDDKNQKQQTNNQLDNQNGNEEKSEQ
VKNQSEENNNQNEQKKKGKYNCRENYEEIYSLIKGYRDTHTAPVDTLGCDLQGDESLPTN
DRNFQKLMAIILSVQTKDETTDLVMKKVVKEKITIDKAVEIPSSELKEIIKQVNFNGKKV
EYIKNAAEVIKNTYNYVIPDQYEDLIKIKGIGPKVANLFLQCAYNKTVGIAVDTHVHRIS
NRLEWVSTKTPEQTRIELEKLLDKKYWEDVNNLLVGYGQSVCKPQNPQCQICPVKDKCPE
GRRRLKGKKKI>TTHERM_01106120(gene)
ATGCCTCCAAAACAATAAAAAACCAAAAAAAATAAAAAAGCTGTTGATTTGCCAGAAAAT
GATAAAGATAAAGAAGAAATACTCGAGAATATTAAGATTACAGAATAAAATGATGAATTA
AAATCTGAAATAGATAGCTTGGATTAATTTAAATTTTAAAAAGAAGAAGTGAACAATCCC
ATTAAAAAAACAAGAAAGCAAAAATTATAAATAGAATATGAATAAAGTGTTAATAAAGTT
GAAAGAGCTTCCAGAAAAAAATTATTAGATAAAAACATTGATGAAGATGATAAAAATTAA
AAATAGCAAACAAATAATTAATTAGACAATTAAAATGGCAATGAAGAGAAAAGTGAATAA
GTAAAAAATTAATCTGAAGAAAATAATAATTAGAATGAATAAAAGAAAAAGGGAAAGTAT
AATTGTAGAGAAAATTATGAAGAAATTTACAGTTTAATAAAAGGATATAGAGATACTCAT
ACAGCTCCAGTAGATACTTTAGGATGTGATCTCTAAGGGGATGAATCTTTACCAACAAAT
GATAGAAATTTTTAAAAATTAATGGCAATTATATTGAGTGTATAGACAAAAGATGAAACA
ACTGACCTAGTAATGAAGAAAGTAGTAAAAGAGAAAATAACTATTGATAAAGCCGTTGAA
ATTCCATCGAGCGAATTAAAAGAAATAATTAAATAAGTTAACTTTAATGGAAAAAAAGTA
GAATATATTAAGAACGCAGCAGAAGTTATAAAAAATACATATAACTATGTTATACCTGAT
TAGTATGAAGATTTAATTAAAATCAAGGGAATAGGTCCAAAAGTTGCAAATTTATTTTTG
TAATGTGCATATAATAAAACTGTAGGAATAGCTGTAGACACGCATGTTCATAGAATATCT
AATAGGCTTGAATGGGTTTCAACAAAAACTCCTGAATAAACTCGAATTGAATTAGAAAAA
TTGCTTGATAAAAAGTATTGGGAAGATGTAAACAATCTGTTAGTTGGATATGGTTAATCA
GTTTGTAAGCCTTAAAATCCCTAGTGCTAAATATGTCCTGTAAAAGATAAGTGTCCTGAG
GGTAGAAGAAGATTAAAAGGAAAGAAAAAAATATGA