Identifiers and Description

Gene Model Identifier

TTHERM_00161070

Standard Name

NOT2 (NOT2/NOT3/NOT5 family protein, subunit of the CCR4-NOT complex)

Aliases

PreTt28499 | 13.m00458 | 3829.m01320

Description

NOT2 / NOT3 / NOT5 family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• obsolete transcription regulator activity (IEA) | GO:0030528

Biological Process

• regulation of transcription (IEA) | GO:0045449

Domains

• ( PF04153 ) NOT2 / NOT3 / NOT5

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00161070

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_05364.1	9.997093137033517e-262	NOT2/NOT3/NOT5 family protein (402 aa)
DictyBase	DDB_G0272056	5.998312950603665e-35	DDB_G0272056 on chromosome: 2 position 1115108 to 1118319
WormBase	WBGene00003826	9.998720540547892e-23	locus:ntl-3 status:Confirmed UniProt:Q0PDJ7 protein_id :CAB07318.1
Oxytricha	Contig21723.0.g24	2.0004286606204839e-16	NOT2 / NOT3 / NOT5 family
Stentor Coeruleus	SteCoe_25327	0.000000000000001713908431542013
SGD	YPR072W	0.000000000010004361180063202	NOT5 Subunit of the CCR4-NOT c omplex, which is a global tran scriptional regulator with rol es in transcription initiation and elongation and in mRNA de gradation

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00161070(coding)
ATGTCTAAAAAAAGAACTCCTGAAGAGGTTGAAGAAGCAGCTAAAAATGTCCTTAAATTA
TGCGAAAGTGTAGAAAATTAAATAAAAAGTCTTAAACAAGATTAGCACTCAAATGATTAA
AGAGATTCAATAGTTAAGGCAATAAGCAGAGATTTGAGCAATCTGAAAAGCATAAGGAAA
AATTAGCTTACTGATGTCGTTTTAAAATAGCACGGCTCATTCTAATTCTAATTCAATAAA
GAAGCAATCTACACTCTTTAGAATATTGTTAACCACGCTGACAATGTGATTAGAAAAGTA
GAATAGAATTTCCCAAATGCACAAAAGGACGAATTCTTATAATGGTATTAAGATTTCAGA
GAAATAATGAATCATAGAATAAAGGAACTTAAGCAAAAGCAACAATAACCAAATAACAAG
AAGGTCAAAAAACCATTAAACTAGAAGCAAAACGACAAAAATGATCAGCTTATTGAAGCC
ATTGAATTCCATCAACAAAAGCTAGATGAAATAAAAATGTTCTTGGAATCTCATATAAAC
ATTTCCATTCCTATCGACTCGTTAACAGCTGTCAAATAAGCTCTTAAAGATATTTTCAAT
TCTGACAGTTAAGATGAGCTCATTAACAATGAAAATATAAAATTCCATTATGATACTATT
GAGAGTGTTTATGAAAGTGATTCAACTTCAACAACTAAATAAGAAGTCCCTTAAACTGCT
GGCACTAACAGTTCATTTACTCTTTTCAATAAAAGCAAGTTATTAGCGTCTTAATAAGAA
AGAAAAAAAGACTTTTCATACTTGACAAACATGCTCCAAACAAGCTTTAACAACTCAATT
CAATAGTCAGATTTCTATCCTTCTGAATTGACCAAAGTCAGTACATCAAATAAAAGCTTG
TTTCCAAAGTATAAAATGCTTTCAGAGGATGTCTTTAGCAAATTTGATCTAGAAACTCTT
TTCTTTATTTTCTACTTTTAGAAAAATACTTATGAACAATACAATGCAGCTAAAACTCTT
AAAAATAAGAGCTGGAGATATCACAAGAAGTATATGACTTGGTTCCAAAGATTAGAAGCT
CCAAAAATTTAAGAAGAAGAATATGAACAGGGAACATATGTAATTTTTGATTATGAAAAG
GGCTGGATCTAGAGAAAGAAAGTAGACTTTAATTTCAAATATACATATTTGGAAGATGAA
TTAAAAGTCTGA

>TTHERM_00161070(protein)
MSKKRTPEEVEEAAKNVLKLCESVENQIKSLKQDQHSNDQRDSIVKAISRDLSNLKSIRK
NQLTDVVLKQHGSFQFQFNKEAIYTLQNIVNHADNVIRKVEQNFPNAQKDEFLQWYQDFR
EIMNHRIKELKQKQQQPNNKKVKKPLNQKQNDKNDQLIEAIEFHQQKLDEIKMFLESHIN
ISIPIDSLTAVKQALKDIFNSDSQDELINNENIKFHYDTIESVYESDSTSTTKQEVPQTA
GTNSSFTLFNKSKLLASQQERKKDFSYLTNMLQTSFNNSIQQSDFYPSELTKVSTSNKSL
FPKYKMLSEDVFSKFDLETLFFIFYFQKNTYEQYNAAKTLKNKSWRYHKKYMTWFQRLEA
PKIQEEEYEQGTYVIFDYEKGWIQRKKVDFNFKYTYLEDELKV

>TTHERM_00161070(gene)
ATGTCTAAAAAAAGAACTCCTGAAGAGGTTGAAGAAGCAGCTAAAAATGTCCTTAAAGTA
ATTAGCTATTTTATAAAATTGATTATGTTTCATTTAATTAAAATTTTCAAATTTTTCAAT
CATAATAGTTATGCGAAAGTGTAGAAAATTAAATAAAAAGTCTTAAACAAGATTAGCACT
CAAATGATTAAAGAGATTCAATAGTTAAGGCAATAAGCAGAGATTTGAGCAATCTGAAAA
GGTAAAAATTCAATTCTAAATTAGAATTAATTTATATCTAATTGCTAATATTTAAATAAA
GTTCTATATATTATTCAAATATTACTTAAAAGCATAAGGAAAAATTAGCTTACTGATGTC
GTTTTAAAATAGCACGGCTCATTCTAATTCTAATTCAATAAAGAAGCAATCTACACTCTT
TAGAATATTGTTAACCACGCTGACAATGTAATAAACATTTTTTGTTTTATCTAGTATTAT
TTACATTATTGAAAAGCAACAAATCCAATTTAATTTTATGAAAAGGTGATTAGAAAAGTA
GAATAGAATTTCCCAAATGCACAAAAGGACGAATTCTTATAATGGTAAAATAATTAATGA
AAGAAGAGGTTTATTCAAACTAAAATTGTAATTAGGTATTAAGATTTCAGAGAAATAATG
AATCATAGAATAAAGGAACTTAAGCAAAAGCAACAATAACCAAATAACAAGAAGGTAATT
AATATTTTTATAAAATAAGTAAATTTATTGTATCGTTTAAATAAAAAGGTCAAAAAACCA
TTAAACTAGAAGCAAAACGACAAAAATGATCAGCTTATTGAAGCCATTGAATTCCATCAA
CAAAAGCTAGATGAAATAAAAATGTTCTTGGAATCTCATATAAACATTTCCATTCCTGTA
TTTACAAATTAAAAAATAAGCACTTTACTATCTTTTTAATTATTAAATAGATCGACTCGT
TAACAGCTGTCAAATAAGCTCTTAAAGATATTTTCAATTCTGACAGTTAAGATGAGCTCA
TTAACAATGAAAATATAAAATTCGTAAATATAATTACTATTGCTAAAAATTGAAATAAAT
TACTTTTAACTATTTAATAAAGCATTATGATACTATTGAGAGTGTTTATGAAAGTGATTC
AACTTCAACAACTAAATAAGAAGTCCCTTAAACTGCTGGCACTAACAGTTCATTTACTCT
TTTCAATAAAAGCAAGTTATTAGCGTCTTAATAAGAAAGAAAAAAAGACTTTTCATACTT
GACAAACATGCTCCAAACAAGCTTTAACAACTCAATTCAATAGTCAGATTTCTATCCTTC
TGAATTGACCAAAGTCAGTACATCAAATAAAAGCTTGTTTCCAAAGTATAAAATGCTTTC
AGAGGATGTCTTTAGCAAATTTGATCTAGAAACTCTTTTCTTTATTTTCTACTTTTAGAA
AGTAAGTTTGATTAGAAAATTTATGAAAATAAAATTTTAATGTATTAATAATTTAATAAG
AATACTTATGAACAATACAATGCAGCTAAAACTCTTAAAAATAAGAGCTGGAGATATCAC
AAGAAGTATATGACTTGGTTCCAAAGATTAGAAGCTCCAAAAGTAAAATAAATTTACATT
TAATAAAGAAAAAGATATTAAAACAGAATTATATTTATTCAGATATTGACAAAAAGAAAT
AATAATTTTTAAAAAACAAAAGATTTAAGAAGAAGAATATGAACAGGGAACATATGTAAT
TTTTGATTATGAAAAGGGCTGGATCTAGAGAAAGAAAGTAGACTTTAATTTCAAATATAC
ATATTTGGAAGATGAATTAAAAGTCTGA