Identifiers and Description
Gene Model Identifier
TTHERM_00161070Standard Name
NOT2 (NOT2/NOT3/NOT5 family protein, subunit of the CCR4-NOT complex)Aliases
PreTt28499 | 13.m00458 | 3829.m01320Description
NOT2 NOT2/NOT3/NOT5 family protein; NOT2 / NOT3 / NOT5 family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- nucleus (IEA) | GO:0005634
Molecular Function
- obsolete transcription regulator activity (IEA) | GO:0030528
Biological Process
- regulation of transcription (IEA) | GO:0045449
Domains
- ( PF04153 ) NOT2 / NOT3 / NOT5
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.9%
TetraMine Data
TTHERM_00161070
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_05364.1 9.997093137033517e-262 NOT2/NOT3/NOT5 family protein
(402 aa)
DictyBase DDB_G0272056 5.998312950603665e-35 DDB_G0272056 on chromosome: 2
position 1115108 to 1118319
WormBase WBGene00003826 9.998720540547892e-23 locus:ntl-3 status:Confirmed
UniProt:Q0PDJ7 protein_id
:CAB07318.1
Oxytricha Contig21723.0.g24 2.0004286606204839e-16 NOT2 / NOT3 / NOT5 family
Stentor Coeruleus SteCoe_25327 0.000000000000001713908431542013 SGD YPR072W 0.000000000010004361180063202 NOT5 Subunit of the CCR4-NOT c
omplex, which is a global tran
scriptional regulator with rol
es in transcription initiation
and elongation and in mRNA de
gradation
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00161070(coding)
ATGTCTAAAAAAAGAACTCCTGAAGAGGTTGAAGAAGCAGCTAAAAATGTCCTTAAATTA
TGCGAAAGTGTAGAAAATTAAATAAAAAGTCTTAAACAAGATTAGCACTCAAATGATTAA
AGAGATTCAATAGTTAAGGCAATAAGCAGAGATTTGAGCAATCTGAAAAGCATAAGGAAA
AATTAGCTTACTGATGTCGTTTTAAAATAGCACGGCTCATTCTAATTCTAATTCAATAAA
GAAGCAATCTACACTCTTTAGAATATTGTTAACCACGCTGACAATGTGATTAGAAAAGTA
GAATAGAATTTCCCAAATGCACAAAAGGACGAATTCTTATAATGGTATTAAGATTTCAGA
GAAATAATGAATCATAGAATAAAGGAACTTAAGCAAAAGCAACAATAACCAAATAACAAG
AAGGTCAAAAAACCATTAAACTAGAAGCAAAACGACAAAAATGATCAGCTTATTGAAGCC
ATTGAATTCCATCAACAAAAGCTAGATGAAATAAAAATGTTCTTGGAATCTCATATAAAC
ATTTCCATTCCTATCGACTCGTTAACAGCTGTCAAATAAGCTCTTAAAGATATTTTCAAT
TCTGACAGTTAAGATGAGCTCATTAACAATGAAAATATAAAATTCCATTATGATACTATT
GAGAGTGTTTATGAAAGTGATTCAACTTCAACAACTAAATAAGAAGTCCCTTAAACTGCT
GGCACTAACAGTTCATTTACTCTTTTCAATAAAAGCAAGTTATTAGCGTCTTAATAAGAA
AGAAAAAAAGACTTTTCATACTTGACAAACATGCTCCAAACAAGCTTTAACAACTCAATT
CAATAGTCAGATTTCTATCCTTCTGAATTGACCAAAGTCAGTACATCAAATAAAAGCTTG
TTTCCAAAGTATAAAATGCTTTCAGAGGATGTCTTTAGCAAATTTGATCTAGAAACTCTT
TTCTTTATTTTCTACTTTTAGAAAAATACTTATGAACAATACAATGCAGCTAAAACTCTT
AAAAATAAGAGCTGGAGATATCACAAGAAGTATATGACTTGGTTCCAAAGATTAGAAGCT
CCAAAAATTTAAGAAGAAGAATATGAACAGGGAACATATGTAATTTTTGATTATGAAAAG
GGCTGGATCTAGAGAAAGAAAGTAGACTTTAATTTCAAATATACATATTTGGAAGATGAA
TTAAAAGTCTGA>TTHERM_00161070(protein)
MSKKRTPEEVEEAAKNVLKLCESVENQIKSLKQDQHSNDQRDSIVKAISRDLSNLKSIRK
NQLTDVVLKQHGSFQFQFNKEAIYTLQNIVNHADNVIRKVEQNFPNAQKDEFLQWYQDFR
EIMNHRIKELKQKQQQPNNKKVKKPLNQKQNDKNDQLIEAIEFHQQKLDEIKMFLESHIN
ISIPIDSLTAVKQALKDIFNSDSQDELINNENIKFHYDTIESVYESDSTSTTKQEVPQTA
GTNSSFTLFNKSKLLASQQERKKDFSYLTNMLQTSFNNSIQQSDFYPSELTKVSTSNKSL
FPKYKMLSEDVFSKFDLETLFFIFYFQKNTYEQYNAAKTLKNKSWRYHKKYMTWFQRLEA
PKIQEEEYEQGTYVIFDYEKGWIQRKKVDFNFKYTYLEDELKV>TTHERM_00161070(gene)
ATGTCTAAAAAAAGAACTCCTGAAGAGGTTGAAGAAGCAGCTAAAAATGTCCTTAAAGTA
ATTAGCTATTTTATAAAATTGATTATGTTTCATTTAATTAAAATTTTCAAATTTTTCAAT
CATAATAGTTATGCGAAAGTGTAGAAAATTAAATAAAAAGTCTTAAACAAGATTAGCACT
CAAATGATTAAAGAGATTCAATAGTTAAGGCAATAAGCAGAGATTTGAGCAATCTGAAAA
GGTAAAAATTCAATTCTAAATTAGAATTAATTTATATCTAATTGCTAATATTTAAATAAA
GTTCTATATATTATTCAAATATTACTTAAAAGCATAAGGAAAAATTAGCTTACTGATGTC
GTTTTAAAATAGCACGGCTCATTCTAATTCTAATTCAATAAAGAAGCAATCTACACTCTT
TAGAATATTGTTAACCACGCTGACAATGTAATAAACATTTTTTGTTTTATCTAGTATTAT
TTACATTATTGAAAAGCAACAAATCCAATTTAATTTTATGAAAAGGTGATTAGAAAAGTA
GAATAGAATTTCCCAAATGCACAAAAGGACGAATTCTTATAATGGTAAAATAATTAATGA
AAGAAGAGGTTTATTCAAACTAAAATTGTAATTAGGTATTAAGATTTCAGAGAAATAATG
AATCATAGAATAAAGGAACTTAAGCAAAAGCAACAATAACCAAATAACAAGAAGGTAATT
AATATTTTTATAAAATAAGTAAATTTATTGTATCGTTTAAATAAAAAGGTCAAAAAACCA
TTAAACTAGAAGCAAAACGACAAAAATGATCAGCTTATTGAAGCCATTGAATTCCATCAA
CAAAAGCTAGATGAAATAAAAATGTTCTTGGAATCTCATATAAACATTTCCATTCCTGTA
TTTACAAATTAAAAAATAAGCACTTTACTATCTTTTTAATTATTAAATAGATCGACTCGT
TAACAGCTGTCAAATAAGCTCTTAAAGATATTTTCAATTCTGACAGTTAAGATGAGCTCA
TTAACAATGAAAATATAAAATTCGTAAATATAATTACTATTGCTAAAAATTGAAATAAAT
TACTTTTAACTATTTAATAAAGCATTATGATACTATTGAGAGTGTTTATGAAAGTGATTC
AACTTCAACAACTAAATAAGAAGTCCCTTAAACTGCTGGCACTAACAGTTCATTTACTCT
TTTCAATAAAAGCAAGTTATTAGCGTCTTAATAAGAAAGAAAAAAAGACTTTTCATACTT
GACAAACATGCTCCAAACAAGCTTTAACAACTCAATTCAATAGTCAGATTTCTATCCTTC
TGAATTGACCAAAGTCAGTACATCAAATAAAAGCTTGTTTCCAAAGTATAAAATGCTTTC
AGAGGATGTCTTTAGCAAATTTGATCTAGAAACTCTTTTCTTTATTTTCTACTTTTAGAA
AGTAAGTTTGATTAGAAAATTTATGAAAATAAAATTTTAATGTATTAATAATTTAATAAG
AATACTTATGAACAATACAATGCAGCTAAAACTCTTAAAAATAAGAGCTGGAGATATCAC
AAGAAGTATATGACTTGGTTCCAAAGATTAGAAGCTCCAAAAGTAAAATAAATTTACATT
TAATAAAGAAAAAGATATTAAAACAGAATTATATTTATTCAGATATTGACAAAAAGAAAT
AATAATTTTTAAAAAACAAAAGATTTAAGAAGAAGAATATGAACAGGGAACATATGTAAT
TTTTGATTATGAAAAGGGCTGGATCTAGAGAAAGAAAGTAGACTTTAATTTCAAATATAC
ATATTTGGAAGATGAATTAAAAGTCTGA