Gene Model Identifier
TTHERM_00384800
Standard Name
NOPP52
Aliases
PreTt24772 | 41.m00179
Description
Nopp52 RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP protein; Nucleolar phosphoprotein; domain structure similar to vertebrate nucleolin and yeast NSR1; localized to macronuclear nucleoli where it is closely associated with rDNA; in vitro substrate for casein kinase II
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Cellular Component
( PF07382 ) Histone H1-like nucleoprotein HC2
( TIGR01622 ) splicing factor, CC1-like family
( PF08186 ) Wound-inducible basic protein family
( PF00076 ) RNA recognition motif. (a.k.a. RRM,
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00384800
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No Data fetched for StockID
(v.2006 protein sequences)
Source Identifier Score Description
SGD YNL175C 7.002638123733849e-21 NOP13 Nucleolar protein found
Tetrahymena borealis EI9_01741.1 2.9992476920535046e-16 hypothetical protein (295 aa)
Stentor Coeruleus SteCoe_35142 0.00000000000003442477108469977
WormBase WBGene00003902 0.00000000000009996062864481225 locus:pab-1 status:Partially
Oxytricha Contig11442.0.g16 0.0000000000002999981760818895 RNA recognition motif_ (a_k_a_
DictyBase DDB_G0275459 0.0000000020002373268528243 DDB_G0275459 on chromosome: 2
No Data fetched for General Information
Ref:11381093 : Savino TM, Gébrane-Younès J, De Mey J, Sibarita JB, Hernandez-Verdun D (2001) Nucleolar assembly of the rRNA processing machinery in living cells. The Journal of cell biology 153(5):1097-110Ref:9017598 : McGrath KE, Smothers JF, Dadd CA, Madireddi MT, Gorovsky MA, Allis CD (1997) An abundant nucleolar phosphoprotein is associated with ribosomal DNA in Tetrahymena macronuclei. Molecular biology of the cell 8(1):97-108Ref:9109258 : Smothers JF, Madireddi MT, Warner FD, Allis CD (1997) Programmed DNA degradation and nucleolar biogenesis occur in distinct organelles during macronuclear development in Tetrahymena. The Journal of eukaryotic microbiology 44(2):79-88
>TTHERM_00384800(coding)ATG TCC AAA TAA GTT AAG AAG GGT CAA GTT GAA AAG AAG ATT AAG GCT GAA GAA GAA AAG AAG AAG GTT GTC TAA CAA TCC TCC GAT GAT AGT GAC GAT TCT TCC AGC GAA GAT GAA AAG CCT GTT GTC AAT AAC AAG AAG AAC CAA AAG GTT TAA GAA AAG GCT GCT GAA AAG GTT ACC AAG GCT AAG AAG CAA GTT TCT GAA TCT TCT GAT GAC AGT GAA TCT GAA GAA GAA AAG CCT GCC CCC AAG AAG GCT GTC GCT GCT AAG ACT GCT CCT GTT GCC AAG AAG GCT GTT GCC AAG AAG GAA TCC TCT GAT TCT GAT GAC AGT GAA TCT GAA GAA GAA AAG CCT GCC CCC AAG AAG GCT GTC GCT GCT AAG ACT GCT CCT GTT GCC AAG AAG GCT GTT GCC AAG AAG GAA TCC TCT GAT TCT GAT GAC AGT GAA TCT GAA GAA GAA AAG CCT GCC CCC AAG AAG GCT GTC GCT GCT AAG ACT GCT CCT GCT GCC AAG AAG GCT GTT GCC AAG AAG GAA TCC TCT GAT TCT GAT GAC AGT GAA TCT GAA GAA CAA AAG CCT GCC CCC AAG AAG GCT GCC GTT AAA CCC GCT GCC AAG AAG TAA GAA TCT GAA GAT GAA GAC AGT GAT GAA TCA GAA GAA TAA AAG CCT GCT ACC AAG AAG GCT GAA AAG ATG TAA GTC GAA GAA GAA TCT TCT GAA GAA TAA AAG CCT ATT AAA TAA GAC CAA CCT ATC CAA AAG GCC TAA AAC GGT AAT GCC AAC GGT AAA TAA GGT GGT GAC AAG TTC TCT AAT GAA GTT ATC GTT AAG GGT TTG AGC TTT GAT GCT GAT GAA AAC GAT ATT GGT AAC TTC TTA GAC GAA AAC TGC GGT TCC GTT GCT AGA GTT AAC CTC TTA AAG AAC GAA TAA GGA CGT TCT AAG GGT ATT GCC TTC GTC AGC TTT GAA ACT GAA GAA GGT TGC AAC AAG GCT GTT GAA ATG AGC AAC TCT GAA TTC ATG GGT AGA TAT CTT ATT ATT GAA AAG ACC AAG CCC AAG ACT GAA AGA CCT GCT CAC TTA CCT GTT GAT GAA GAC TCC AAG ACT ATC TTT GTT GGT AAC CTC TCT TTC AGA ACC GAC AAG GAA ACT CTT AAG AAG TTC TTC GCC TCT TGC GGT AAG GTT GCT GAT GCT CGT ATC GCT GAA GCT GAT GGA AAG AGC AGA GGT TTC GGT CAC GTT GAA TTC GAA GAA AGA TCC GGT GTT GAA AAT GCT TTA AAG AAG GTT GGT GAA TAA ATC GAC GGA AGA CCC ATC AAG GTT GAT GTC GCT GCT TCC AGA GGT AAA CGT GAA GGT TTC AAC AGA TCC TAA GGA AAC TTC AAT AAC AAC AGA GGT GGT CCC CGT GGT GGT AAC AAC TCT TTT GCT AAC GAA AGA AAG GGT GCC ATT ACT TAA TTC TAA GGA AAA ATC CAA TCT CTC TGA >TTHERM_00384800(protein)M S K Q V K K G Q V E K K I K A E E E K K K V V Q Q S S D D S D D S S S E D E K P V V N N K K N Q K V Q E K A A E K V T K A K K Q V S E S S D D S E S E E E K P A P K K A V A A K T A P V A K K A V A K K E S S D S D D S E S E E E K P A P K K A V A A K T A P V A K K A V A K K E S S D S D D S E S E E E K P A P K K A V A A K T A P A A K K A V A K K E S S D S D D S E S E E Q K P A P K K A A V K P A A K K Q E S E D E D S D E S E E Q K P A T K K A E K M Q V E E E S S E E Q K P I K Q D Q P I Q K A Q N G N A N G K Q G G D K F S N E V I V K G L S F D A D E N D I G N F L D E N C G S V A R V N L L K N E Q G R S K G I A F V S F E T E E G C N K A V E M S N S E F M G R Y L I I E K T K P K T E R P A H L P V D E D S K T I F V G N L S F R T D K E T L K K F F A S C G K V A D A R I A E A D G K S R G F G H V E F E E R S G V E N A L K K V G E Q I D G R P I K V D V A A S R G K R E G F N R S Q G N F N N N R G G P R G G N N S F A N E R K G A I T Q F Q G K I Q S L >TTHERM_00384800(gene)ATG TCC AAA TAA GTT GTA AGA ATT TTA TTC ATA ATT TTT TAG CTA TTA TAA AAC TAA TTC ACT TTA TAA ATC ATT TTA TTA ATC TAT TCT TTA ATC ATT ATA GAA GAA GGG TCA AGT TGA AAA GAA GAT TAA GGC TGA AGA AGA AAA GAA GAA GGT TGT CTA ACA ATC CTC CGA TGA TAG TGA CGA TTC TTC CAG CGA AGA TGA AAA GCC TGT TGT CAA TAA CAA GAA GAA CCA AAA GGT TTA AGA AAA GGC TGC TGA AAA GGT TAC CAA GGC TAA GAA GCA AGT TTC TGA ATC TTC TGA TGA CAG TGA ATC TGA AGA AGA AAA GCC TGC CCC CAA GAA GGC TGT CGC TGC TAA GAC TGC TCC TGT TGC CAA GAA GGC TGT TGC CAA GAA GGA ATC CTC TGA TTC TGA TGA CAG TGA ATC TGA AGA AGA AAA GCC TGC CCC CAA GAA GGC TGT CGC TGC TAA GAC TGC TCC TGT TGC CAA GAA GGC TGT TGC CAA GAA GGA ATC CTC TGA TTC TGA TGA CAG TGA ATC TGA AGA AGA AAA GCC TGC CCC CAA GAA GGC TGT CGC TGC TAA GAC TGC TCC TGC TGC CAA GAA GGC TGT TGC CAA GAA GGA ATC CTC TGA TTC TGA TGA CAG TGA ATC TGA AGA ACA AAA GCC TGC CCC CAA GAA GGC TGC CGT TAA ACC CGC TGC CAA GAA GTA AGA ATC TGA AGA TGA AGA CAG TGA TGA ATC AGA AGA ATA AAA GCC TGC TAC CAA GAA GGC TGA AAA GAT GTA AGT CGA AGA AGA ATC TTC TGA AGA ATA AAA GCC TAT TAA ATA AGA CCA ACC TAT CCA AAA GGC CTA AAA CGG TAA TGC CAA CGG TAA ATA AGG TGG TGA CAA GTT CTC TAA TGA AGT TAT CGT TAA GGG TTT GAG CTT TGA TGC TGA TGA AAA CGA TAT TGG TAA CTT CTT AGA CGA AAA CTG CGG TTC CGT TGC TAG AGT TAA CCT CTT AAA GAA CGA ATA AGG ACG TTC TAA GGG TAT TGC CTT CGT CAG CTT TGA AAC TGA AGA AGG TTG CAA CAA GGC TGT TGA AAT GAG CAA CTC TGA ATT CAT GGG TAG ATA TCT TAT TAT TGA AAA GAC CAA GCC CAA GAC TGA AAG ACC TGC TCA CTT ACC TGT TGA TGA AGA CTC CAA GAC TAT CTT TGT TGG TAA CCT CTC TTT CAG AAC CGA CAA GGA AAC TCT TAA GAA GTT CTT CGC CTC TTG CGG TAA GGT TGC TGA TGC TCG TAT CGC TGA AGC TGA TGG AAA GGT AAC TAA CCA ATT TAA ATT TAT ATC TAA TAT AAT TTT TAT CTG AAA ATG TGA TGG GGT ATA GCT TGC TTA TTA TTT ATT TTA GGG AAA TAT TTT ATT TGA GAT TAA TTA AGG GAT AAA AGT TAT AAT TAG GAA CAT ACT ATA CTT ATT AGA GAG TTA AGT AGG AGT TTA CAA TAT TAA GAT ATA AAA ATA ATA AAT TAC AAA TAA AAA AAA AAT AAA TTG ATT AAT AAA TAA ATA AAT TAA TCA ATC AAT TAA TAA TAG TAT CTT CGT TCG TTA ATA GAC AAA CAC AAT AAA AAA TAA ATA AAA TTT CCC AAA TTA ATT AAT TAA TCA ATT AGT AAT GAA TAA GTA ACA TTG ATT ATA TTT CCC TAA ATA AAT CAC TAA GAT AAT AAA TTA ATT AAT TAA TTA CAT GAT AAC TTT TAA CTT TAT TCA AAT ATT AAA TAT AAT TTT TAA AAA TTT AGA GCA GAG GTT TCG GTC ACG TTG AAT TCG AAG AAA GAT CCG GTG TTG AAA ATG CTT TAA AGA AGG TTG GTG AAT AAA TCG ACG GAA GAC CCA TCA AGG TTG ATG TCG CTG CTT CCA GAG GTA AAC GTG AAG GTT TCA ACA GAT CCT AAG GAA ACT TCA ATA ACA ACA GAG GTG GTC CCC GTG GTG GTA ACA ACT CTT TTG CTA ACG AAA GAA AGG GTG CCA TTA CTT AAT TCT AAG GAA AAA TCC AAT CTC TCT GA
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Identifiers and Description
Gene Ontology Annotations 
Domains
Gene Expression Profile
Signal Peptide
Homologs (v.2006 protein sequences)
General Information 
Associated Literature 
Sequences
