Identifiers and Description
Gene Model Identifier
TTHERM_00470530Standard Name
NMD3 (nonsense-mediated mRNA decay protein 3)Aliases
PreTt22467 | 56.m00171 | 3686.m00014Description
NMD3 60S ribosomal export protein NMD3 putative; NMD3 family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 19.4%
TetraMine Data
TTHERM_00470530
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_11389.1 9.997093137033517e-262 NMD3 family protein (628 aa)
Oxytricha Contig20934.0.g47 4.998599334973554e-137 NMD3 family
DictyBase DDB_G0271306 4.000347951747671e-122 nmd3 on chromosome: 2 position
129822 to 131608
SGD YHR170W 1.0000409741368237e-118 NMD3 Protein involved in nucle
ar export of the large ribosom
al subunit; acts as a Crm1p-de
pendent adapter protein for ex
port of nascent ribosomal subu
nits through the nuclear pore
complex
WormBase WBGene00012030 4.0002634815779907e-110 status:Confirmed UniProt:Q22
792 protein_id:CAA96689.2
Stentor Coeruleus SteCoe_14944 3.817497188671175e-54
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00470530(coding)
ATGTAGGGAGCCTCATAGTTATTAAACATTAGTGCAAGATCAAATGGATCTCAATTTATG
AGCAGCACTTTCTAAAGAGTCACCGCAAACATCCTCTGTTGTATGTGTGGTGTCTCCTTT
AATGCTGCCTAAACAAGAACAAATATGTGTGTTAATTGTTTAACCAATTAACAAGATATT
ACTACAGGAATTACTAAATAGGGAGTAGTTAATTTTTGTCGTATGTGCAGACGTTACAAC
AAACCACCTTGGGTTTATTGTGAACGTGAAAGCAAAGAAATGCTCTCTCTTTGTCTTAAG
AAGATTAAGGGTCTTGAGAAGGTTAAACTCATAGACAGTGCTTTCTTGTATACTGAACCC
CATTCTCGTCGTATTCGTATCCGTCTTACTATCTAAAAAGAAGTCATGAATAATACTTCT
ATCTAATAAAATTTTGTCGTTGAATTCGTAGAACACTACGGCTAGTGTGATGACTGTAAA
AAGGAATTTACTCCTCACACATGGGGTGCTTAAGTCTAACTTCGTTAAAAAGTTGAACAC
AAAAAGACTTTCTTCTTCTTAGAATAAGTTATGTTAAAGCATAATGCTCACGATAAAGTT
TTGAAAGTAGAAGAAAAGGATGATGGTTTAGATTTCTTCTATAAAAATAAAATGTAAGCA
AATCGTTTGGTAGACTTCATATAAAGTGTTATCCCCTGCAAGATTAAGCCTTCCAAACAG
CTTATCGGACTTGACGATCGTAACAATATTTACAATTACAAATATTCTTGGTCTGTTGAA
ATTCCTAAAATATGCAAGGATGACTTGTGTGTTTTCCCTCCTAGATTATGCAAAGAGTTA
GGAGGTATCAGTCCTCTTGTATTATGTGTTAAAGTTAGCAATATGCTCCATTTCGTAGAT
ACTCACACTCATAAGCGTATTGACATCACTGCTGAAAGATACTTCCATTATGAAAACGAC
ATTATTGTTCTCTCCTTAAAGAAAAACTCTACTGAATTTATGGTTACTGGTATTGAAAAA
ATTGAAAATGAATTTACTAATCCCTAAAGCTTGAATGAATCCTCTGTTAACACCAGTTAC
ATGTCTTCAATCAGCAACGTTTACTAAGATAAACTAGCTCACTTAACCCTCATGCGTACT
AGCGATTGGAAAGAATTCCATGCTAAAGCACATCTTGGTGAAATTATTAAGGAAGGATGC
ATGGTTTTGGGTTATGATTTGACAACATTGAACTACTCTGAAGACCTTGAAGTTCTTAAA
AATGCTCCTGAAATTATTATTGTCAAACGTATTTATGATAAGGAAAATAAAGCCCGTATT
TGGAAGCTTAAGCGTTTATAGATGGATGGTGTTATGGTTGAAGAAAATACCGAAGAAGCT
AATAAGAAGGGCAAGAAAAAAATAGTCTCAGACTAGGATAAAGAATAAGATTTTGAAGAG
TTTATGGATGACATAGAACGTGATCCTCTTATGCGTGAAAAAATTAATTTATATAAGGAT
GATGAAGGAATTAAAAAGCTCTCAGATAAGGAACTTGCAAGAAAGCAATAACTTTCCAGA
CGTCTTAAAAGAAAAATGCTTAAAGTTATTAACGTTAAAGTTAAAGATCCCTAAGAAATT
ATCAGATAACAAGAAGAAGAATTATAAGAGAAGCTTCGTATCGCAGAAGAAAAGAGGGCT
GAAAAGGAAGCTAAAAAGAAAGAAAAGGAAGACGAAGAAGACTACAACCGTAACGAAGTT
AAGTTGGCTGAATTATTAGAAGATCTTAATCTTGAAGAAGATAAAGGTGAAGAAGATGGA
GACAAAGTCTTTGATGAAGACAATTTCATTGACGAATTTATTAAAAGACTTGATCATATT
AAAATTGAAAAGTAATGA>TTHERM_00470530(protein)
MQGASQLLNISARSNGSQFMSSTFQRVTANILCCMCGVSFNAAQTRTNMCVNCLTNQQDI
TTGITKQGVVNFCRMCRRYNKPPWVYCERESKEMLSLCLKKIKGLEKVKLIDSAFLYTEP
HSRRIRIRLTIQKEVMNNTSIQQNFVVEFVEHYGQCDDCKKEFTPHTWGAQVQLRQKVEH
KKTFFFLEQVMLKHNAHDKVLKVEEKDDGLDFFYKNKMQANRLVDFIQSVIPCKIKPSKQ
LIGLDDRNNIYNYKYSWSVEIPKICKDDLCVFPPRLCKELGGISPLVLCVKVSNMLHFVD
THTHKRIDITAERYFHYENDIIVLSLKKNSTEFMVTGIEKIENEFTNPQSLNESSVNTSY
MSSISNVYQDKLAHLTLMRTSDWKEFHAKAHLGEIIKEGCMVLGYDLTTLNYSEDLEVLK
NAPEIIIVKRIYDKENKARIWKLKRLQMDGVMVEENTEEANKKGKKKIVSDQDKEQDFEE
FMDDIERDPLMREKINLYKDDEGIKKLSDKELARKQQLSRRLKRKMLKVINVKVKDPQEI
IRQQEEELQEKLRIAEEKRAEKEAKKKEKEDEEDYNRNEVKLAELLEDLNLEEDKGEEDG
DKVFDEDNFIDEFIKRLDHIKIEKQ>TTHERM_00470530(gene)
ATGTAGGGAGCCTCATAGTTATTAAACATTAGTGCAAGATCAAATGGATCTCAATTTATG
AGCAGCACTTTCTAAAGAGTCACCGCAAACATCCTCTGTTGTATGTGTGGTGTCTCCTTT
AATGCTGCCTAAACAAGAACAAATATGTGTGTTAATTGTTTAACCAATTAACAAGATATT
ACTACAGGAATTACTAAATAGGGAGTAGTTAATTTTTGTCGTATGTGCAGACGTTACAAC
AAACCACCTTGGGTTTATTGTGAACGTGAAAGCAAAGAAATGCTCTCTCTTTGTCTTAAG
AAGATTAAGGGTCTTGAGAAGGTTAAACTCATAGACAGTGCTTTCTTGTATACTGAACCC
CATTCTCGTCGTATTCGTATCCGTCTTACTATCTAAAAAGAAGTCATGAATAATACTTCT
ATCTAATAAAATTTTGTCGTTGAATTCGTAGAACACTACGGCTAGTGTGATGACTGTAAA
AAGGAATTTACTCCTCACACATGGGGTGCTTAAGTCTAACTTCGTTAAAAAGTTGAACAC
AAAAAGACTTTCTTCTTCTTAGAATAAGTTATGTTAAAGCATAATGCTCACGATAAAGTT
TTGAAAGTAGAAGAAAAGGATGATGGTTTAGATTTCTTCTATAAAAATAAAATGTAAGCA
AATCGTTTGGTAGACTTCATATAAAGTGTTATCCCCTGCAAGATTAAGCCTTCCAAACAG
CTTATCGGACTTGACGATCGTAACAATATTTACAATTACAAATATTCTTGGTCTGTTGAA
ATTCCTAAAATATGCAAGGATGACTTGTGTGTTTTCCCTCCTAGATTATGCAAAGAGTTA
GGAGGTATCAGTCCTCTTGTATTATGTGTTAAAGTTAGCAATATGCTCCATTTCGTAGAT
ACTCACACTCATAAGCGTATTGACATCACTGCTGAAAGATACTTCCATTATGAAAACGAC
ATTATTGTTCTCTCCTTAAAGAAAAACTCTACTGAATTTATGGTTACTGGTATTGAAAAA
ATTGAAAATGAATTTACTAATCCCTAAAGCTTGAATGAATCCTCTGTTAACACCAGTTAC
ATGTCTTCAATCAGCAACGTTTACTAAGATAAACTAGCTCACTTAACCCTCATGCGTACT
AGCGATTGGAAAGAATTCCATGCTAAAGCACATCTTGGTGAAATTATTAAGGAAGGATGC
ATGGTTTTGGGTTATGATTTGACAACATTGAACTACTCTGAAGACCTTGAAGTTCTTAAA
AATGCTCCTGAAATTATTATTGTCAAACGTATTTATGATAAGGAAAATAAAGCCCGTATT
TGGAAGCTTAAGCGTTTATAGATGGATGGTGTTATGGTTGAAGAAAATACCGAAGAAGCT
AATAAGAAGGGCAAGAAAAAAATAGTCTCAGACTAGGATAAAGAATAAGATTTTGAAGAG
TTTATGGATGACATAGAACGTGATCCTCTTATGCGTGAAAAAATTAATTTATATAAGGAT
GATGAAGGAATTAAAAAGCTCTCAGATAAGGAACTTGCAAGAAAGCAATAACTTTCCAGA
CGTCTTAAAAGAAAAATGCTTAAAGTTATTAACGTTAAAGTTAAAGATCCCTAAGAAATT
ATCAGATAACAAGAAGAAGAATTATAAGAGAAGCTTCGTATCGCAGAAGAAAAGAGGGCT
GAAAAGGAAGCTAAAAAGAAAGAAAAGGAAGACGAAGAAGACTACAACCGTAACGAAGTT
AAGTTGGCTGAATTATTAGAAGATCTTAATCTTGAAGAAGATAAAGGTGAAGAAGATGGA
GACAAAGTCTTTGATGAAGACAATTTCATTGACGAATTTATTAAAAGACTTGATCATATT
AAAATTGAAAAGTAATGA