Identifiers and Description

Gene Model Identifier

TTHERM_00590240

Standard Name

NIP7 (60S ribosome subunit biogenesis protein NIP7)

Aliases

PreTt24138 | 81.m00195 | 3726.m00071

Description

60S ribosome subunit biogenesis protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF01472 ) PUA domain
• ( PF03657 ) Uncharacterised protein family (UPF0113)

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.7%

TetraMine Data

TTHERM_00590240

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_16968.1	9.998173848842182e-134	60S ribosome subunit biogenesi s protein (189 aa)
Oxytricha	Contig10478.0.g26	1.9993206333383003e-80	Uncharacterised protein family (UPF0113)
SGD	YPL211W	2.0001503375893664e-79	NIP7 Nucleolar protein require d for 60S ribosome subunit bio genesis, constituent of 66S pr e-ribosomal particles; physica lly interacts with Nop8p and t he exosome subunit Rrp43p
DictyBase	DDB_G0295477	5.997225115851065e-74	nip7 on chromosome: 2 position 615393 to 616101
WormBase	WBGene00016607	4.997593565024277e-70	60S ribosome subunit biogenesi s protein NIP7 homolog statu s:Confirmed UniProt:P91154 protein_id:CCD65161.1
Stentor Coeruleus	SteCoe_18271	7.281290178321643e-33

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00590240(coding)
ATGAGATTATTAACTGACGAAGAAACTAAAGTCTTTTTCACTAAGCTTTCAGAATACATT
GGCCCAAACATTAAATTCTTAATCGATAGAACTGATGAACCTCACGTTTTCCGTCTTGTA
AAAGATCGTGTTTATTACATGAGTGAATCAATTATGAAATAAGCTCAAAATATTGGCAGA
GACTAGTTGATGCACGCTGGTACATGCTTTGGTAAATTCACTAAGGGTGGAAAATTCAGA
TTGAGCATCACTTGTTTAGATTATTTAGCCAAGTTTGCCAAGAATAAAGTCTGGCTCAAA
CCTTAGGGTGAACAATCTTACTGTTACGGTAACCACGTTATTAAGGCCCACGTAGGTAGA
ATGACTGAAAATATAGTTTAATACGCTGGTGTTGTTATTTTCTCTATGAATGACATGCCT
CTTGGTTTTGGTATTGCTGCCAGGGGTACTCTTTAAGCCAAGGATATGGATCCTACTGGT
GTTGTTGTTTTCAATCAAAGTGATGTGGGTGAATATTTACGTAACGAAGACGAAGAAAGA
TCTGCTGCTTAATAAAATCAATAATAGTGA

>TTHERM_00590240(protein)
MRLLTDEETKVFFTKLSEYIGPNIKFLIDRTDEPHVFRLVKDRVYYMSESIMKQAQNIGR
DQLMHAGTCFGKFTKGGKFRLSITCLDYLAKFAKNKVWLKPQGEQSYCYGNHVIKAHVGR
MTENIVQYAGVVIFSMNDMPLGFGIAARGTLQAKDMDPTGVVVFNQSDVGEYLRNEDEER
SAAQQNQQQ

>TTHERM_00590240(gene)
ATGAGATTATTAACTGACGAAGAAACTAAAGTCTTTTTCACTAAGCTTTCAGAATACATT
GGCCCAAACATTAAATTCTTAATCGATAGAACTGATGAACCTCACGTTTTCCGTCTTGTA
AAAGATCGTGTTTATTACATGAGTGAATCAATTATGAAATAAGCTCAAAATATTGGCAGA
GACTAGTTGATGCAGTAATTTTTTATAAATTTTTTCATTTAAATTTTATCCTTAGTTATC
ACTCTAGCAAATAATCTACATTTTTTGTCAATAAATGGCTAAATTGTCAATTATTGAAAA
TAAAAAAAGCACTTTAATTTTAATTAAGAGCAAGCAAGCAATAACATCTAATTCTACTTT
GAGAATTTTACAAATCTTTATGATAATTAATGTCAAAATGTATTAATAAATTATTATTTA
CTACTAATTAGCGCTGGTACATGCTTTGGTAAATTCACTAAGGGTGGAAAATTCAGATTG
AGCATCACTTGTTTAGATTATTTAGCCAAGTTTGCCAAGAATAAAGTCTGGCTCAAACCT
TAGGGTGAACAATCTTACTGTTACGGTAACCACGTTATTAAGGCCCACGTAGGTAGAATG
ACTGAAAATATAGTTTAATACGCTGGTGTTGTTATTTTCTCTATGAATGACATGCCTCTT
GGTTTTGGTATTGCTGCCAGGGGTACTCTTTAAGCCAAGGATATGGATCCTACTGGTGTT
GTTGTTTTCAATCAAAGTGATGTGGGTGAATATTTACGTAACGAAGACGAAGAAAGATCT
GCTGCTTAATAAAATCAATAATAGTGA