Identifiers and Description

Gene Model Identifier

TTHERM_00637360

Standard Name

NAF1 (Nuclear Assembly Factor)

Aliases

PreTt19739 | 91.m00154

Description

Gar1/NAF1 RNA-binding region protein; NAF1 domain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF05492 ) NAF1 domain
• ( PF06357 ) Omega-atracotoxin
• ( PF04410 ) Gar1 protein RNA binding region

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00637360

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_03553.1	1.9991691033935208e-179	NAF1 domain-containing protein (547 aa)
Oxytricha	Contig11754.0.g93	0.000000000000006999063783600386	Gar1/Naf1 RNA binding region
SGD	YNL124W	0.0000000010002658722841845	NAF1 RNA-binding protein requi red for the assembly of box H/ ACA snoRNPs and thus for pre-r RNA processing, forms a comple x with Shq1p and interacts wit h H/ACA snoRNP components Nhp2 p and Cbf5p; similar to Gar1p
WormBase	WBGene00009132	0.000008000552149328928	status:Confirmed UniProt:Q19 788 protein_id:CAA93283.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00637360(coding)
ATGGATCAAGAAGATATATAATAGTAATTCTCTTAAGAAAATTAGAATATTTAGTTTGTT
AATACAAATACTACATCTAACATTTTACCCATCACTGTTTAGAATTCAGAGTAGCTAAAC
ATAGAAAATTAGCAGGATCCTACAACTCTGTAAGCTGATAACTAAAAATAGGTAACATAC
TACTTTAGGGATTCAGACTAATCTGAATGGAGTTCAAGTGAAAGTGAGGGAGAAGATAAT
TAAAATGAAGACAACTTATAAGAAAATTAAATTGAATAAGAAGAAAATAATATGGAAAAT
GATTAAGCTAATAAAAAGAAGAAAAATAAAAATAAGAATACCAAAAAATATGATGAAGAT
TTTTTTGAAGAAGAGGATATTGTAATTGATCCTAAAGGTGAATAAATGAAAACCAAAAAT
GAAGCAAAGCCTTAAAAGTATGAAAAGTTTGAATCAGACATGGAAAGACTTGTAAGATTT
GGAGTTTAATTTAAAGGAAACGAGGTTTTGGTAGAGCTTGGATAAATTATGACTATAGTA
GATGACAAGATCATTATTGCTACTAACAATGAAATGAGAGAAGCAGAAAAAAGAATCATT
GTTGACCTCGACAATATTATATTTAATGAATAAAAAAATATTATTGGAAATGTAGATGAT
GTATTTGGAAATATTAAAAATCCATTTTATTGTGTTATTATAGACAAATACACTGAGGAA
ATGATAGCTTAGAAGAGATTATAAGTAGGTTAAAAAGTTTATATGATTGAAGGTTATAAT
AAGTTGTTAATGAAAGCCTAATTAGAATTCCTGTTAAGATAAAAAGGATGCGATGCTTCA
AATAGATTTGATGAAGAAGTGCTAAATGACAATGAAATAGAGTATTCAGATGATGAAATG
GAGTCAAAAGCTAAAACTAAAAGAAATAACAAAGAGAGAAAATAAGATTTGGAAGATGTA
GAAGAAGAAGTTAGAAATGAAGAAAAGCAAAATCCTATTAAATAAAAGAAGAATAAGAAA
ATTATGGTCATGAAAAATGAAAATGGTGTTTTAAAAAGAATATTTTTAAAGCCTTCTGAG
TTTGAAAGCTTGAAAAATAATCCTAATAACAAGATACAGCAGCTTCCATCAGGATATAAT
CCAAATAAATTCCCTAAAGGTGGTAATCCAAATAATTAATAGTAATAATTCAGTATTCCA
AGTGGATAAAATCCTCACTATTAGAAGCCCAACTATTAATAAAATAAATAATATAGGCCA
AATAATAATCCAAATTATTAGAAATAAAACTACTATTAGAATTAGCAAAATTATTAAGGA
TAGCAATCTTCTTAAAATTATTAATACTAGCAATAAACTCCATTTACAAATTACTAAAAC
TAATAACAATAATATGGCTATCAAAATTAATAGCAGTTTAATCAAATTCCCTAGCAATAG
TAGTAATATTATCAAAATAATGATTACTAATAAAATTAATAAAATAATTAAGACCAAAAT
TTCTAAAATTAAAACAACTATTAAAACTTTAACAATATGTAGCAATAATAATAGCACTAC
CAATAATCACCTTAAAATTTTCAATAAAACAATTAAATGAATTGA

>TTHERM_00637360(protein)
MDQEDIQQQFSQENQNIQFVNTNTTSNILPITVQNSEQLNIENQQDPTTLQADNQKQVTY
YFRDSDQSEWSSSESEGEDNQNEDNLQENQIEQEENNMENDQANKKKKNKNKNTKKYDED
FFEEEDIVIDPKGEQMKTKNEAKPQKYEKFESDMERLVRFGVQFKGNEVLVELGQIMTIV
DDKIIIATNNEMREAEKRIIVDLDNIIFNEQKNIIGNVDDVFGNIKNPFYCVIIDKYTEE
MIAQKRLQVGQKVYMIEGYNKLLMKAQLEFLLRQKGCDASNRFDEEVLNDNEIEYSDDEM
ESKAKTKRNNKERKQDLEDVEEEVRNEEKQNPIKQKKNKKIMVMKNENGVLKRIFLKPSE
FESLKNNPNNKIQQLPSGYNPNKFPKGGNPNNQQQQFSIPSGQNPHYQKPNYQQNKQYRP
NNNPNYQKQNYYQNQQNYQGQQSSQNYQYQQQTPFTNYQNQQQQYGYQNQQQFNQIPQQQ
QQYYQNNDYQQNQQNNQDQNFQNQNNYQNFNNMQQQQQHYQQSPQNFQQNNQMN

>TTHERM_00637360(gene)
ATGGATCAAGAAGATATATAATAGTAATTCTCTTAAGAAAATTAGAATATTTAGTTTGTT
AATACAAATACTACATCTAACATTTTACCCATCACTGTTTAGAATTCAGAGTAGCTAAAC
ATAGAAAATTAGCAGGATCCTACAACTCTGTAAGCTGATAACTAAAAATAGGTAACATAC
TACTTTAGGGATTCAGACTAATCTGAATGGAGTTCAAGTGAAAGTGAGGGAGAAGATAAT
TAAAATGAAGACAACTTATAAGAAAATTAAATTGAATAAGAAGAAAATAATATGGAAAAT
GATTAAGCTAATAAAAAGAAGAAAAATAAAAATAAGAATACCAAAAAATATGATGAAGAT
TTTTTTGAAGAAGAGGATATTGTAATTGATCCTAAAGGTGAATAAATGAAAACCAAAAAT
GAAGCAAAGCCTTAAAAGTATGAAAAGTTTGAATCAGACATGGAAAGACTTGTAAGATTT
GGAGTTTAATTTAAAGGAAACGAGGTTTTGGTAGAGCTTGGATAAATTATGACTATAGTA
GATGACAAGATCATTATTGCTACTAACAATGAAATGAGAGAAGCAGAAAAAAGAATCATT
GTTGACCTCGACAATATTATATTTAATGAATAAAAAAATATTATTGGAAATGTAGATGAT
GTATTTGGAAATATTAAAAATCCATTTTATTGTGTTATTATAGACAAATACACTGAGGAA
ATGATAGCTTAGAAGAGATTATAAGTAGGTTAAAAAGTTTATATGATTGAAGGTTATAAT
AAGTTGTTAATGAAAGCCTAATTAGAATTCCTGTTAAGATAAAAAGGATGCGATGCTTCA
AATAGATTTGATGAAGAAGTGCTAAATGACAATGAAATAGAGTATTCAGATGATGAAATG
GAGTCAAAAGCTAAAACTAAAAGAAATAACAAAGAGAGAAAATAAGATTTGGAAGATGTA
GAAGAAGAAGTTAGAAATGAAGAAAAGCAAAATCCTATTAAATAAAAGAAGAATAAGAAA
ATTATGGTCATGAAAAATGAAAATGGTGTTTTAAAAAGAATATTTTTAAAGCCTTCTGAG
TTTGAAAGCTTGAAAAATAATCCTAATAACAAGATACAGCAGCTTCCATCAGGATATAAT
CCAAATAAATTCCCTAAAGGTGGTAATCCAAATAATTAATAGTAATAATTCAGTATTCCA
AGTGGATAAAATCCTCACTATTAGAAGCCCAACTATTAATAAAATAAATAATATAGGCCA
AATAATAATCCAAATTATTAGAAATAAAACTACTATTAGAATTAGCAAAATTATTAAGGA
TAGCAATCTTCTTAAAATTATTAATACTAGCAATAAACTCCATTTACAAATTACTAAAAC
TAATAACAATAATATGGCTATCAAAATTAATAGCAGTTTAATCAAATTCCCTAGCAATAG
TAGTAATATTATCAAAATAATGATTACTAATAAAATTAATAAAATAATTAAGACCAAAAT
TTCTAAAATTAAAACAACTATTAAAACTTTAACAATATGTAGCAATAATAATAGCACTAC
CAATAATCACCTTAAAATTTTCAATAAAACAATTAAATGAATTGA