Identifiers and Description
Gene Model Identifier
TTHERM_00600670Standard Name
LSD2Aliases
PreTt22130 | 83.m00199 | 3685.m00091Description
flavin containing family amine oxidaseGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- oxidoreductase activity (IEA) | GO:0016491
- electron transfer activity (IEA) | GO:0009055
Domains
- ( TIGR02731 ) phytoene desaturase
- ( TIGR02734 ) phytoene desaturase
- ( TIGR02732 ) carotene 7,8-desaturase
- ( PF01266 ) FAD dependent oxidoreductase
- ( TIGR00031 ) UDP-galactopyranose mutase
- ( PF01593 ) amine oxidase, flavin-containing
- ( TIGR00137 ) tRNA:m(5)U-54 methyltransferase
- ( PF03778 ) Protein of unknown function (DUF321)
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 44.9%
TetraMine Data
TTHERM_00600670
WebApollo
Fullscreen View
Tetrahymena Stock Center
- ( SD01740 ) Micronucleus: PAR1 gene partially replaced by neo4-KanR2 cassette. Macronucleus: LSD2 gene partially replaced by neo4-KanR2 cassette.
Homologs (v.2006 protein sequences)
Source Identifier Score Description Stentor Coeruleus SteCoe_4768 0 Tetrahymena borealis EI9_14924.1 9.997093137033517e-262 amine oxidase, flavin-containi
ng family protein (455 aa)
DictyBase DDB_G0289265 2.0008113830639685e-30 DDB_G0289265 on chromosome: 5
position 2564981 to 2566834
WormBase WBGene00000137 1.000116773704384e-19 locus:amx-1 Amine oxidase fa
mily member 1 status:Partial
ly_confirmed UniProt:Q21988
protein_id:CAA84671.3
SGD YMR020W 0.0000000039998859049333245 FMS1 Polyamine oxidase, conver
ts spermine to spermidine, whi
ch is required for the essenti
al hypusination modification o
f translation factor eIF-5A; a
lso involved in pantothenic ac
id biosynthesis
Oxytricha Contig18181.0.g40 0.000000004999139696582238 Flavin containing amine oxidor
eductase
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00600670(coding)
ATGAGTACCAAACGGAAATCTGTTTTAATTATTGGTGCTGGTATATCTGGTTTAGCTGCT
GCTCATTCTTTGCATGAGAATGGATTTGATGTTCAAATTTTTGAAGCTCGAAAGGAGTTT
GGAGGAAGAATACGTAAGGATGATTCATTTGCTGGGTTCACCCTCGAGGTAGGCGGCGAG
GAAATCCACAAAGTGAACAGTCCTTATTACCATCTAGCCCTGAAAATGGGAGCTGATCTT
AAACCTGATGACACACTCAATCATTACTTTGAAGACATTGAAAAAGAAGAACTCATTGAT
AGAGAAGAATTTTTAAACAAGTACAATGACTAATACTTCTACAATGAAGTTGTTTAAAAT
AGAGACATCTAAGACGACTCTCAGTCACTCTAAAATTTCTTTACCAAAAAGGGACTAAAA
TCTCAATTTTACCAGTGGTACGAAGCTTTCTGGGGTATTGAAAACGGAGGTTCTCTGAAT
GAAATTTCTGTAAAAGCATACGGAGATTACGAAAGTGGTAGAAAGAGTGATCATGACTTA
AATTTCATATTGATGAACACTTCTCACTATGAGATCATTGAAAAAGCTTTTGAATCTGTA
TTACCTTTCATTCATTACTCTACTCCTATCACTGAAATCAACTACTTTGGTGAAAAAGAA
CACCCATTATAAAGAGACGAAGATGATGAAGATGAAGATAATGACGAAGATGACTGTAAA
GGAAAGGATTTCAATAGAGTTATCATTTTCGATAAGTAGGGAAATAGATACGAAGGAGAC
TATATCATTGTCACAGTTCCTATTTCTTAGTTGTAAAATAAAACAATTCGCTTTAATCCA
GAATTACCACCTTAAAAGTAAGATGCTATTCGTCGTATGAAGCTCGGAAGAGGAGGTAAA
ATCCATTTCAAATTTAAGAATAGATTCTGGCCTGATAATGCAAGGACAATCTTTTTAAGA
TCTAAAATCAGTTTCTTGTGGAATCAATACCACGAATAGAAAGATACTGATGAAATTCAA
ACTAATGTCTTGGCTGGTCTTTTAGCTGGTGATATTATGGATGAAATGCAAGATCCTGAA
AAAAGGTAGGCTCTTATTGATGAAGTTTTAGAAAAAATGACTCGTGTCTTCAAATACCCA
AATGCAAAGGAAGAATTATTAGATGTTATGTGGAATGATTTTACTAATTTTGAATACATC
TAAGGTAACTACTCAATGCCAACTTTAAATATTGGTAGCTCTCGCTATATTTATTAATAG
CCAGTTGATAACATACTATTCTTTGCTGGAGAAGCTTCTCATACTACCGATTCGATGACA
ATTCATGGTGCTTATGAGACAGGTTTGCGTGACGCATAGCGCATCATCGATCTTCAGAAG
GAAAAGAAGTGA>TTHERM_00600670(protein)
MSTKRKSVLIIGAGISGLAAAHSLHENGFDVQIFEARKEFGGRIRKDDSFAGFTLEVGGE
EIHKVNSPYYHLALKMGADLKPDDTLNHYFEDIEKEELIDREEFLNKYNDQYFYNEVVQN
RDIQDDSQSLQNFFTKKGLKSQFYQWYEAFWGIENGGSLNEISVKAYGDYESGRKSDHDL
NFILMNTSHYEIIEKAFESVLPFIHYSTPITEINYFGEKEHPLQRDEDDEDEDNDEDDCK
GKDFNRVIIFDKQGNRYEGDYIIVTVPISQLQNKTIRFNPELPPQKQDAIRRMKLGRGGK
IHFKFKNRFWPDNARTIFLRSKISFLWNQYHEQKDTDEIQTNVLAGLLAGDIMDEMQDPE
KRQALIDEVLEKMTRVFKYPNAKEELLDVMWNDFTNFEYIQGNYSMPTLNIGSSRYIYQQ
PVDNILFFAGEASHTTDSMTIHGAYETGLRDAQRIIDLQKEKK>TTHERM_00600670(gene)
ATGAGTACCAAACGGAAATCTGTTTTAATTATTGGTGCTGGTATATCTGGTTTAGCTGCT
GCTCATTCTTTGCATGAGAATGGATTTGATGTTCAAATTTTTGAAGCTCGAAAGGAGTTT
GGAGGAAGAATACGTAAGGATGATTCATTTGCTGGGTTCACCCTCGAGGTAGGCGGCGAG
GAAATCCACAAAGTGAACAGTCCTTATTACCATCTAGCCCTGAAAATGGGAGCTGATCTT
AAACCTGATGACACACTCAATCATTACTTTGAAGACATTGAAAAAGAAGAACTCATTGAT
AGAGAAGAATTTTTAAACAAGTACAATGACTAATACTTCTACAATGAAGTTGTTTAAAAT
AGAGACATCTAAGACGACTCTCAGTCACTCTAAAATTTCTTTACCAAAAAGGGACTAAAA
TCTCAATTTTACCAGTGGTACGAAGCTTTCTGGGGTATTGAAAACGGAGGTTCTCTGAAT
GAAATTTCTGTAAAAGCATACGGAGATTACGAAAGTGGTAGAAAGAGTGATCATGACTTA
AATTTCATATTGATGAACACTTCTCACTATGAGATCATTGAAAAAGCTTTTGAATCTGTA
TTACCTTTCATTCATTACTCTACTCCTATCACTGAAATCAACTACTTTGGTGAAAAAGAA
CACCCATTATAAAGAGACGAAGATGATGAAGATGAAGATAATGACGAAGATGACTGTAAA
GGAAAGGATTTCAATAGAGTTATCATTTTCGATAAGTAGGGAAATAGATACGAAGGAGAC
TATATCATTGTCACAGTTCCTATTTCTTAGTTGTAAAATAAAACAATTCGCTTTAATCCA
GAATTACCACCTTAAAAGTAAGATGCTATTCGTCGTATGAAGCTCGGAAGAGGAGGTAAA
ATCCATTTCAAATTTAAGAATAGATTCTGGCCTGATAATGCAAGGACAATCTTTTTAAGA
TCTAAAATCAGTTTCTTGTGGAATCAATACCACGAATAGAAAGATACTGATGAAATTCAA
ACTAATGTCTTGGCTGGTCTTTTAGCTGGTGATATTATGGATGAAATGCAAGATCCTGAA
AAAAGGTAGGCTCTTATTGATGAAGTTTTAGAAAAAATGACTCGTGTCTTCAAATACCCA
AATGCAAAGGAAGAATTATTAGATGTTATGTGGAATGATTTTACTAATTTTGAATACATC
TAAGGTAACTACTCAATGCCAACTTTAAATATTGGTAGCTCTCGCTATATTTATTAATAG
CCAGTTGATAACATACTATTCTTTGCTGGAGAAGCTTCTCATACTACCGATTCGATGACA
ATTCATGGTGCTTATGAGACAGGTTTGCGTGACGCATAGCGCATCATCGATCTTCAGAAG
GAAAAGAAGTGA