Identifiers and Description

Gene Model Identifier

TTHERM_00849260

Standard Name

LIA6 (localized in macronuclear anlagen 6)

Aliases

PreTt24927 | 149.m00053 | 3750.m00283

Description

hypothetical protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00849260

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_18705.1	1.999489510516749e-128	hypothetical protein (568 aa)

General Information

No Data fetched for General Information

Associated Literature

1. Ref:26688337: Kataoka K, Mochizuki K (2015) Phosphorylation of an HP1-like Protein Regulates Heterochromatin Body Assembly for DNA Elimination. Developmental cell 35(6):775-88
2. Ref:17519286: Yao MC, Yao CH, Halasz LM, Fuller P, Rexer CH, Wang SH, Jain R, Coyne RS, Chalker DL (2007) Identification of novel chromatin-associated proteins involved in programmed genome rearrangements in Tetrahymena. Journal of cell science 120(Pt 12):1978-89

Sequences

>TTHERM_00849260(coding)
ATGGAAAGCTAAGTTGTAAATAATTCAGATGTTAAGAATCTTTAGACTCTCTCGATGATA
CTTGACACCTACCTTGAAAATTGTATTCAAAATACTGATTGGGAAAATAAAGCTAATTCT
TAAAGGGAGAAAGAAAAGCTTTACTAAAAAATTTTAAAGACCATAAACTAAATATTTAGC
AGGATTGGCGTTGCTGCAGCAACACTTGCTATGCAACCTTAATTGAATCCATAAGAAAAA
TAACTAAATGATGCTTAAGTTTAATAATAAGATTAAATAAACACTAATAAAAATCCCAAT
ATGGAAACTGAAAATGCAGTAAATGTAAATGGTTAGTTGAATTAAAATAAAGTTGACCAA
TTTTATGGAAACGGCTAAGCCCAAAAACTTTAAGATGGACAATAAGACAAAAATAACATG
GTTCAAGTAAATAAGAATCAAATGGAAGATGAGTCTGGCTATTGCTAAAAAGTTGTGATT
AATGCTCATCCTTTTAAGCAAAGATTAATTAACTAATAATAACGTATGTAGCAAGAGTTA
AAATAAAAGAACGATCAATAATCTGATGAAGAAGATTACGATCCACCAGATAATAGTAGT
GATAGTGATTTTAGATCAAGTGATGAAGAATATTCTGATAAAAAGAAAAAGTTAATTCAT
AAGAAAAAGCACAATAACTACTTCTCTTATAATAGCCAAAACACTTCACAAACATCTTCG
AGGCCAAGAGGCAGACCTCCCAGCTTTGCTAATAGTGAGAACGGTACAGTAAGCATATAA
GTAGCTCCAGTGAGTGAATAAAAAAAAATACTTGAGTACTTTAATCAACACTATGACCCA
TAAAAAAGGAATAAGATATATGTGATTAACTAGATCACCAAATAATTTAACTACTCCTAT
TCTAGTGTTTACTATCTCGTAACTAAATAGGTTGTAACAGAAGAACAAGAATACCATGAA
TAGATCTAGAAGCATAAACAATAATAGCATAGAAGCTCAAACTAATTCTAGACATAACTG
TAGAGGTAATAAATGTAATAATAGTAATATTACTAAAATTAGTTTAGTCAATATAGTTAT
AAAAGTGAATAATTTAATAATGGTTATCCTCGCTAAGGCCAATCGCAATCTTCTTAACTC
CACCAGAGTGACATGTAAAAAAGGAATCCTTCATATTATGAGTAGTAAAGGTAGTAGATG
AGAGAAAATAAAATATCTCCAAATGATCGTTTTGCTTAAAATCTTTTAAATTAACCAAAC
TCTCAACCTTCTTATAATACTTAAAATCAACAGCGTAGAAATCCTATCAATTAATACTCA
TAGTAGTAAGGAAATTATTAAAACAGTAACTATTAGGCCTAGGAAATGTCACAAACAGAC
TCAGACTCTGGGTTATTCCAAAACTAAGCACACAACAGATAGATGTATCCTAAGGCAGAA
GATGAATTGTTTAGAAATGATCTTAAGGTTGAATCCTTACAAGAATCTCGCAGAGTTAGT
GAGCAAGGATAAGATTTACAAGCAAAGCAAATTCCAGGCAATTAATAAAATCGTCTAGTC
TCATCAGAAAATAGATAAAATTTATATGGAGAATACCATCGCAGTGCCTCAAGTAGAGAT
ACTATTTAAATTTAGTAGAAGCAAGAATGA

>TTHERM_00849260(protein)
MESQVVNNSDVKNLQTLSMILDTYLENCIQNTDWENKANSQREKEKLYQKILKTINQIFS
RIGVAAATLAMQPQLNPQEKQLNDAQVQQQDQINTNKNPNMETENAVNVNGQLNQNKVDQ
FYGNGQAQKLQDGQQDKNNMVQVNKNQMEDESGYCQKVVINAHPFKQRLINQQQRMQQEL
KQKNDQQSDEEDYDPPDNSSDSDFRSSDEEYSDKKKKLIHKKKHNNYFSYNSQNTSQTSS
RPRGRPPSFANSENGTVSIQVAPVSEQKKILEYFNQHYDPQKRNKIYVINQITKQFNYSY
SSVYYLVTKQVVTEEQEYHEQIQKHKQQQHRSSNQFQTQLQRQQMQQQQYYQNQFSQYSY
KSEQFNNGYPRQGQSQSSQLHQSDMQKRNPSYYEQQRQQMRENKISPNDRFAQNLLNQPN
SQPSYNTQNQQRRNPINQYSQQQGNYQNSNYQAQEMSQTDSDSGLFQNQAHNRQMYPKAE
DELFRNDLKVESLQESRRVSEQGQDLQAKQIPGNQQNRLVSSENRQNLYGEYHRSASSRD
TIQIQQKQE

>TTHERM_00849260(gene)
ATGGAAAGCTAAGTTGTAAATAATTCAGATGTTAAGAATCTTTAGACTCTCTCGATGATA
CTTGACACCTACCTTGAAAATTGTATTCAAAATACTGATTGGGAAAATAAAGCTAATTCT
TAAAGGGAGAAAGAAAAGCTTTACTAAAAAATTTTAAAGACCATAAACTAAATATTTAGC
AGGATTGGCGTTGCTGCAGCAACACTTGCTATGCAACCTTAATTGAATCCATAAGAAAAA
TAACTAAATGATGCTTAAGTTTAATAATAAGATTAAATAAACACTAATAAAAATCCCAAT
ATGGAAACTGAAAATGCAGTAAATGTAAATGGTTAGTTGAATTAAAATAAAGTTGACCAA
TTTTATGGAAACGGCTAAGCCCAAAAACTTTAAGATGGACAATAAGACAAAAATAACATG
GTTCAAGTAAATAAGAATCAAATGGAAGATGAGTCTGGCTATTGCTAAAAAGTTGTGATT
AATGCTCATCCTTTTAAGCAAAGATTAATTAACTAATAATAACGTATGTAGCAAGAGTTA
AAATAAAAGAACGATCAATAATCTGATGTAAATTTTTTTTATATGAAATAATTTATTAAA
CTAACTTAAAATACTTTAGGAAGAAGATTACGATCCACCAGATAATAGTAGTGATAGTGA
TTTTAGATCAAGTGATGAAGAATATTCTGATAAAAAGAAAAAGTTAATTCATAAGAAAAA
GCACAATAACTACTTCTCTTATAATAGCCAAAACACTTCACAAACATCTTCGAGGCCAAG
AGGCAGACCTCCCAGCTTTGCTAATAGTGAGAACGGTACAGTAAGCATATAAGTAGCTCC
AGTGAGTGAATAAAAAAAAATACTTGAGTACTTTAATCAACACTATGACCCATAAAAAAG
GAATAAGATATATGTGATTAACTAGATCACCAAATAATTTAACTACTCCTATTCTAGTGT
TTACTATCTCGTAACTAAATAGGTTGTAACAGAAGAACAAGAATACCATGAATAGATCTA
GAAGCATAAACAATAATAGCATAGAAGCTCAAACTAATTCTAGACATAACTGTAGAGGTA
ATAAATGTAATAATAGTAATATTACTAAAATTAGTTTAGTCAATATAGTTATAAAAGTGA
ATAATTTAATAATGGTTATCCTCGCTAAGGCCAATCGCAATCTTCTTAACTCCACCAGAG
TGACATGTAAAAAAGGAATCCTTCATATTATGAGTAGTAAAGGTAGTAGATGAGAGAAAA
TAAAATATCTCCAAATGATCGTTTTGCTTAAAATCTTTTAAATTAACCAAACTCTCAACC
TTCTTATAATACTTAAAATCAACAGCGTAGAAATCCTATCAATTAATACTCATAGTAGTA
AGGAAATTATTAAAACAGTAACTATTAGGCCTAGGAAATGTCACAAACAGACTCAGACTC
TGGGTTATTCCAAAACTAAGCACACAACAGATAGATGTATCCTAAGGCAGAAGATGAATT
GTTTAGAAATGATCTTAAGGTTGAATCCTTACAAGAATCTCGCAGAGTTAGTGAGCAAGG
ATAAGATTTACAAGCAAAGCAAATTCCAGGCAATTAATAAAATCGTCTAGTCTCATCAGA
AAATAGATAAAATTTATATGGAGAATACCATCGCAGTGCCTCAAGGTAACAATACTTAAA
ATTAACTAAAACATATTTATATTTTAAATTTATAAAGTAGAGATACTATTTAAATTTAGT
AGAAGCAAGAATGA