Gene Model Identifier
TTHERM_00085600
Standard Name
LIA4
Aliases
PreTt16408 | 6.m00482 | 3836.m02076
Description
LIA4 hypothetical protein; Localize In macronuclear Anlagen 4 protein - involved in macronuclear differentiation.
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Cellular Component
( PF03869 ) Arc-like DNA binding domain
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00085600
Fullscreen View
No Data fetched for StockID
(v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_02454.1 3.00125275364795e-159 hypothetical protein (994 aa)
Paragraph No Gene Name Paragraph Text 22 LIA4 LIA4 is expressed exclusively during conjugation and Lia4p localizes to developing macronuclei. It is required for completion of conjugation, DNA rearrangement, chromosome breakage, and Pdd1 foci (dumposome) formation (Horrell SA and Chalker DL, unpublished data).
Ref:25084866 : Horrell SA, Chalker DL (2014) LIA4 encodes a chromoshadow domain protein required for genomewide DNA rearrangements in Tetrahymena thermophila. Eukaryotic cell 13(10):1300-11Ref:17519286 : Yao MC, Yao CH, Halasz LM, Fuller P, Rexer CH, Wang SH, Jain R, Coyne RS, Chalker DL (2007) Identification of novel chromatin-associated proteins involved in programmed genome rearrangements in Tetrahymena. Journal of cell science 120(Pt 12):1978-89
>TTHERM_00085600(coding)ATG GTT GAT ATT GTT GAT GAT AGT ATG CAT AAT ATG CCT AAT ATT GAT ATA AAA GAA GAA GAG GAA GTT GAT TTT AAT TTA AAT GAA GCT GGA AAT AAG AAA AAG CTT TAC AGC TCT GAT GAT TCA AAA GAT TAA AAT GAT AAT TAA AAT AAT GTT CTT GAG CCT TCT GTT TTG AAT GTA GAA GCT ACA AAC GGT AAT ATA CCA GAA AGT GAT ATT CTA TAA TAA GTA AAC GAA ACT ATG GAC ATC GAA TAA AAA GAA AAA GCA AGT GAA AGC AAA CAA AAA AAA TAA TAA AAA GAC AAC AAC AAA GAT ATG TCA GAA GGT AGC TAA TTA GAA AAT GAA GAT TAT AAA GAT GCT GAG TCA AGC TAA AGC AAA ACA ACT TCA GAT GAA GAT TAC TAA AAT CCC TTA GAA AAG GGA ATG GTA ATG GAA GAA TAT GAA GAT GAT GAT GAG TTT ATT GGT GTA GAA GAA GAG ATT CCT TCC ACT CAA TTA GAG CAA AGG AAG AAT TCT AGG AAA TCA AAT GAG AAA AGA GGG CAG AGA AAG AAA AAA ATG ATT GAA TCT GAA GAA GGA GAT GAG GAA GAT TCT TCT AAT TCA AGT TCT GGT TTT TCA TAA AGA AAA AAC TAA CTT AAT TAA AAG AGA AAT ACT TCT ACA AGA ACT AGG AGA AGA AGA AGA TAA AAC AGT TAA ATT AAT GAT TCT ACT TTT AGT GAA ATA AAA CCA TAG AAA AGA ACT CGT AGA AAA AAA ACA AAT GTA GAT GAA TCA GGA TTA AGT TTC AAT AAT AAA GAA GAT AAT CAA CTC ATA CAA GAT GCA ATA GAT TTT ATT AAA AGT AAA CCG AGA AGA AGA AGG ACA AGC AAA AAA GAA AAT GTA AAA TTG GAT TCT GAA TTT TTA GAA AAA ATA CAA AAA AAA GCA AAA TCA AAT GAA AAA GAA GTT CCT AAT AAT TTA TAG CAA ATT AAT TTA AAT TAA AAT GGC TAA GGA CAA CAA AAT GGG AAT ATA CCA TAA TAA TTC ATT GAT CTA AAT AAG ACA ATC TCA AAT GAA ATT TAA TTT TAA CAA ATA AAT CCT TAA TTG ATA CAG TAA TAG TTA TAA TTT TAA AAC TTA GCC TAG CTC TAG TTA TAA GCA ATG CAG CAA TTA CCA TTT ATA TTA TAG AAA TAA CAG CAA TAA TAA TAA TAA TAG TAG TAA TAG TAG AAT TAA CAA TAA AAT GGC TAA TTA CAA GCA GCT TTA GCT AAT CCA CTT TTA CTT TAG AAT TAC TAA AAT TAA TTT CTT TTG TAA GCT TAA AGA AAC GCT GAA ATG CTC ATG AAT GTT AAA AAG GAG GAT CTT TCA AAT TAA CCA CTA CTA AAT CTA GGT TTG CAG TAA CAA AAT TTA GAG GAT AAT AAA AAT TTA CCA AAG TAA ACA ACT CAA CTT GTA CAA TAG AAT TCT AAC AGC AAC CAA ACA AAC GGA AGA CAT AGA ACT GGA AGG AGA GGA AGA GGT AGT GTT TAA TCT AAC TAA ACT AGT GGG AAA AAT TCT AAA GTA GAT GAA AGT TTT ACT GTA GAT GAT TTA GGA AGA AGA AAG AAG TAT AAT ACG AGA AGG AAG ATT CAA AAA TAG AAC TAT GCT GAA AGT CCT TTG AAT GAA GAT AGA GAT AAG GAG GAG AAT AAA ACC TCT GAA TAA AAA GAG AAA TCT GGA AAT AAA GAT TAA AGA AGT TTA GAA GAA GTT GGT AAT GCT GCA ATA GAT GAG TCA AAT ATA GAG TTA ATT GAG AAA ATT CAA AAG AAA GCT GAA GAA AAA AAA TTA GGA AAG GAA ATT GAA TAA TAG TTA AAA GAT TTG TTG AGC AAA ATA GAA AAT GAA AAG TAA AAT TAA ATT CTT AGT CAG ATA GTG AAT AAA TAC AAC TTA AAC ACT GAA AAA ATA AAA GAA TCA TAA CCT CCA AAG TAA AAC AGT AAA ACT AAA GAA GAT GTA AAG AAA AAA GGA ACT ACA AAA GAA ATA ATA TTG AAT CCT CAT TAA ACT CTT ACA TAA TAA CTT GAA GTT ATT GAT AAT ATA TCT GTT GAT AGT GCA AAC GGT GTT AAC ATT AAT TAC AGA GAG TCA GGT TCG TCA GAT GAA AAT CTG AAT CAA ATT AAA AAT GTT GTA GAT CTT GAT AAA GAA AAA GAG CTG AAA AAA CCA AAA TAG TTA TAA ACA TCA TAC AAG TTG TTG AAT TAT GAT AAG TTA GAA TAA AAA GGT AAT ATT TGT TCA AAA GGA AGA CAA GAT GAC AAA AAG ACT GCT TAG CCT GCG AAT AAT CTA GAT TAA GCA TCT TAA AAT GAA GAA AGT GAT GAA GAA GAT GAT TAT ATT AGA GAT GAA GTA ATT CCA ATT ACA GGT CAT TTT AAA TAT AAA GAT AAA GCT GCT GGA GTC CTT TCA TCA AAA ATA TTA AAT AAA AAT ATA TAT CTT GAA ATA TAA TGG GAA AAA AGA AAA AAT GGT GTG ACA CCA ACT CCT ACC ATC ATT AAT ACT CAT GAA GTA AAA GCA TAT GAC ACT GAT TTC TTA ATA GAT TTT TAT GAA TCT AAA ATA TTA AAA ACA AAT GAA TCA AAA GCC TAA AGA CTA CCT AAT CAA TAA GTT AGT GGT TCT AAG AAT TCA CAT ATT GAG TAA CTC AGA TAA GAT GTT CAT AAA AAC TAA ATG CAA GTA TCT TTA CAG CAA AAA GAT AAA TAT TAT AAA TTA GTA GAA CCC AAA GAA AAC TAA GCA CTC TCT TTA CTT GAT AGC CAG ACA AAT TAA TCT AAA AAT ACA GAA AAT AAA ACT GTG AGT AAC AAT TAA GGT AAC ACC AGC AAC GTT CTA AAC CAA AAC AAA AAG TAA ATC GAC CTT GAT TAG TAA AGT GAT AAC GAA AGC GGT GAT GAG GAA ATT ACC CAA AAA GAT AAA AAT AAA ATC TAT TAA ATA GAT ACA CCA TCT AGT AAA TCA AGT GAA GAA TTT TGC ATT GAT CCT TAC AGA AAA TTC ATA GAG GAT GAA GGT CTT CTC CCA GAA TAA TTA CAA TAA GAA TTA AAA GAA AAA CTC GTT TTT TGA >TTHERM_00085600(protein)M V D I V D D S M H N M P N I D I K E E E E V D F N L N E A G N K K K L Y S S D D S K D Q N D N Q N N V L E P S V L N V E A T N G N I P E S D I L Q Q V N E T M D I E Q K E K A S E S K Q K K Q Q K D N N K D M S E G S Q L E N E D Y K D A E S S Q S K T T S D E D Y Q N P L E K G M V M E E Y E D D D E F I G V E E E I P S T Q L E Q R K N S R K S N E K R G Q R K K K M I E S E E G D E E D S S N S S S G F S Q R K N Q L N Q K R N T S T R T R R R R R Q N S Q I N D S T F S E I K P Q K R T R R K K T N V D E S G L S F N N K E D N Q L I Q D A I D F I K S K P R R R R T S K K E N V K L D S E F L E K I Q K K A K S N E K E V P N N L Q Q I N L N Q N G Q G Q Q N G N I P Q Q F I D L N K T I S N E I Q F Q Q I N P Q L I Q Q Q L Q F Q N L A Q L Q L Q A M Q Q L P F I L Q K Q Q Q Q Q Q Q Q Q Q Q Q N Q Q Q N G Q L Q A A L A N P L L L Q N Y Q N Q F L L Q A Q R N A E M L M N V K K E D L S N Q P L L N L G L Q Q Q N L E D N K N L P K Q T T Q L V Q Q N S N S N Q T N G R H R T G R R G R G S V Q S N Q T S G K N S K V D E S F T V D D L G R R K K Y N T R R K I Q K Q N Y A E S P L N E D R D K E E N K T S E Q K E K S G N K D Q R S L E E V G N A A I D E S N I E L I E K I Q K K A E E K K L G K E I E Q Q L K D L L S K I E N E K Q N Q I L S Q I V N K Y N L N T E K I K E S Q P P K Q N S K T K E D V K K K G T T K E I I L N P H Q T L T Q Q L E V I D N I S V D S A N G V N I N Y R E S G S S D E N L N Q I K N V V D L D K E K E L K K P K Q L Q T S Y K L L N Y D K L E Q K G N I C S K G R Q D D K K T A Q P A N N L D Q A S Q N E E S D E E D D Y I R D E V I P I T G H F K Y K D K A A G V L S S K I L N K N I Y L E I Q W E K R K N G V T P T P T I I N T H E V K A Y D T D F L I D F Y E S K I L K T N E S K A Q R L P N Q Q V S G S K N S H I E Q L R Q D V H K N Q M Q V S L Q Q K D K Y Y K L V E P K E N Q A L S L L D S Q T N Q S K N T E N K T V S N N Q G N T S N V L N Q N K K Q I D L D Q Q S D N E S G D E E I T Q K D K N K I Y Q I D T P S S K S S E E F C I D P Y R K F I E D E G L L P E Q L Q Q E L K E K L V F >TTHERM_00085600(gene)ATG GTT GAT ATT GTT GAT GAT AGT ATG CAT AAT ATG CCT AAT ATT GAT ATA AAA GAA GAA GAG GAA GTT GAT TTT AAT TTA AAT GAA GCT GGA AAT AAG AAA AAG CTT TAC AGC TCT GAT GAT TCA AAA GAT TAA AAT GAT AAT TAA AAT AAT GTT CTT GAG CCT TCT GTT TTG AAT GTA GAA GCT ACA AAC GGT AAT ATA CCA GAA AGT GAT ATT CTA TAA TAA GTA AAC GAA ACT ATG GAC ATC GAA TAA AAA GAA AAA GCA AGT GAA AGC AAA CAA AAA AAA TAA TAA AAA GAC AAC AAC AAA GAT ATG TCA GAA GGT AGC TAA TTA GAA AAT GAA GAT TAT AAA GAT GCT GAG TCA AGC TAA AGC AAA ACA ACT TCA GAT GAA GAT TAC TAA AAT CCC TTA GAA AAG GGA ATG GTA ATG GAA GAA TAT GAA GAT GAT GAT GAG TTT ATT GGT GTA GAA GAA GAG ATT CCT TCC ACT CAA TTA GAG CAA AGG AAG AAT TCT AGG AAA TCA AAT GAG AAA AGA GGG CAG AGA AAG AAA AAA ATG ATT GAA TCT GAA GAA GGA GAT GAG GAA GAT TCT TCT AAT TCA AGT TCT GGT TTT TCA TAA AGA AAA AAC TAA CTT AAT TAA AAG AGA AAT ACT TCT ACA AGA ACT AGG AGA AGA AGA AGA TAA AAC AGT TAA ATT AAT GAT TCT ACT TTT AGT GAA ATA AAA CCA TAG AAA AGA ACT CGT AGA AAA AAA ACA AAT GTA GAT GAA TCA GGA TTA AGT TTC AAT AAT AAA GAA GAT AAT CAA CTC ATA CAA GAT GCA ATA GAT TTT ATT AAA AGT AAA CCG AGA AGA AGA AGG ACA AGC AAA AAA GAA AAT GTA AAA TTG GAT TCT GAA TTT TTA GAA AAA ATA CAA AAA AAA GCA AAA TCA AAT GAA AAA GAA GTT CCT AAT AAT TTA TAG CAA ATT AAT TTA AAT TAA AAT GGC TAA GGA CAA CAA AAT GGG AAT ATA CCA TAA TAA TTC ATT GAT CTA AAT AAG ACA ATC TCA AAT GAA ATT TAA TTT TAA CAA ATA AAT CCT TAA TTG ATA CAG TAA TAG TTA TAA TTT TAA AAC TTA GCC TAG CTC TAG TTA TAA GCA ATG CAG CAA TTA CCA TTT ATA TTA TAG AAA TAA CAG CAA TAA TAA TAA TAA TAG TAG TAA TAG TAG AAT TAA CAA TAA AAT GGC TAA TTA CAA GCA GCT TTA GCT AAT CCA CTT TTA CTT TAG AAT TAC TAA AAT TAA TTT CTT TTG TAA GCT TAA AGA AAC GCT GAA ATG CTC ATG AAT GTT AAA AAG GAG GAT CTT TCA AAT TAA CCA CTA CTA AAT CTA GGT TTG CAG TAA CAA AAT TTA GAG GAT AAT AAA AAT TTA CCA AAG TAA ACA ACT CAA CTT GTA CAA TAG AAT TCT AAC AGC AAC CAA ACA AAC GGA AGA CAT AGA ACT GGA AGG AGA GGA AGA GGT AGT GTT TAA TCT AAC TAA ACT AGT GGG AAA AAT TCT AAA GTA GAT GAA AGT TTT ACT GTA GAT GAT TTA GGA AGA AGA AAG AAG TAT AAT ACG AGA AGG AAG ATT CAA AAA TAG AAC TAT GCT GAA AGT CCT TTG AAT GAA GAT AGA GAT AAG GAG GAG AAT AAA ACC TCT GAA TAA AAA GAG AAA TCT GGA AAT AAA GAT TAA AGA AGT TTA GAA GAA GTT GGT AAT GCT GCA ATA GAT GAG TCA AAT ATA GAG TTA ATT GAG AAA ATT CAA AAG AAA GCT GAA GAA AAA AAA TTA GGA AAG GAA ATT GAA TAA TAG TTA AAA GAT TTG TTG AGC AAA ATA GAA AAT GAA AAG TAA AAT TAA ATT CTT AGT CAG ATA GTG AAT AAA TAC AAC TTA AAC ACT GAA AAA ATA AAA GAA TCA TAA CCT CCA AAG TAA AAC AGT AAA ACT AAA GAA GAT GTA AAG AAA AAA GGA ACT ACA AAA GAA ATA ATA TTG AAT CCT CAT TAA ACT CTT ACA TAA TAA CTT GAA GTT ATT GAT AAT ATA TCT GTT GAT AGT GCA AAC GGT GTT AAC ATT AAT TAC AGA GAG TCA GGT TCG TCA GAT GAA AAT CTG AAT CAA ATT AAA AAT GTT GTA GAT CTT GAT AAA GAA AAA GAG CTG AAA AAA CCA AAA TAG TTA TAA ACA TCA TAC AAG TTG TTG AAT TAT GAT AAG TTA GAA TAA AAA GGT AAT ATT TGT TCA AAA GGA AGA CAA GAT GAC AAA AAG ACT GCT TAG CCT GCG AAT AAT CTA GAT TAA GCA TCT TAA AAT GAA GAA AGT GAT GAA GAA GAT GAT TAT ATT AGA GAT GAA GTA ATT CCA ATT ACA GGT CAT TTT AAA TAT AAA GAT AAA GCT GCT GGA GTC CTT TCA TCA AAA ATA TTA AAT AAA AAT ATA TAT CTT GAA ATA TAA TGG GAA AAA AGA AAA AAT GGT GTG ACA CCA ACT CCT ACC ATC ATT AAT ACT CAT GAA GTA AAA GCA TAT GAC ACT GAT TTC TTA ATA GAT TTT TAT GAA TCT AAA ATA TTA AAA ACA AAT GAA TCA AAA GCC TAA AGA CTA CCT AAT CAA TAA GTT AGT GGT TCT AAG AAT TCA CAT ATT GAG TAA CTC AGA TAA GAT GTT CAT AAA AAC TAA ATG CAA GTA TCT TTA CAG CAA AAA GAT AAA TAT TAT AAA TTA GTA GAA CCC AAA GAA AAC TAA GCA CTC TCT TTA CTT GAT AGC CAG ACA AAT TAA TCT AAA AAT ACA GAA AAT AAA ACT GTG AGT AAC AAT TAA GGT AAC ACC AGC AAC GTT CTA AAC CAA AAC AAA AAG TAA ATC GAC CTT GAT TAG TAA AGT GAT AAC GAA AGC GGT GAT GAG GAA ATT ACC CAA AAA GAT AAA AAT AAA ATC TAT TAA ATA GAT ACA CCA TCT AGT AAA TCA AGT GAA GAA TTT TGC ATT GAT CCT TAC AGA AAA TTC ATA GAG GAT GAA GGT CTT CTC CCA GAA TAA TTA CAA TAA GAA TTA AAA GAA AAA CTC GTT TTT TGA
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