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Identifiers and Description
Gene Model Identifier
TTHERM_00569290Standard Name
LIA2 (localized in macronuclear anlagen 2)Aliases
PreTt10459 | 76.m00161 | 3810.m02020 | DRH3Description
DEAD/DEAH box helicase family proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Molecular Function
- ATP-dependent helicase activity (IEA) | GO:0008026
- ATP binding (IEA) | GO:0005524
- helicase activity (IEA) | GO:0004386
- nucleic acid binding (IEA) | GO:0003676
Domains
No Data fetched for Domains
Gene Expression Profile
- Tetrahymena Functional Genomics Database: TTHERM_00569290
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_03481.1 9.99709313703352e-262 DEAD/DEAH box helicase (58...
Oxytricha Contig21312.0.g80 6.9984550256737e-155 DEAD/DEAH box helicase
ToxoDB 46.m00027 1.00001985756599e-106 Toxoplasma gondii DEAD/DEAH bo
x helicase, putative
DictyBase DDB0219818 1.00043485889854e-105 ddx17 DEAD/DEAH box helicase p
utative RNA helicase
DictyBase DDB0233431 1.00043485889854e-105 ddx17 DEAD/DEAH box helicase p
utative RNA helicase
TAIR AT1G55150 1.00026461339066e-103 DEAD box RNA helicase, putativ
e (RH20)
ParameciumDB GSPATP00010683001 9.99679536751975e-103 Paramecium tetraurelia GSPATP0
0010683001 protein
SGD YNL112W 9.99924209282795e-100 DBP2 SGDID:S000005056, Chr XIV
from 413641-414913,415916-416
283, Verified ORF, "Essential
ATP-dependent RNA helicase of
the DEAD-box protein family, i
nvolved in nonsense-mediated m
RNA decay and rRNA processing"
IPI(HUMAN) IPI:IPI00023785.5 4.00017901319196e-98 1|TREMBL:Q59F66|ENSEMBL:ENSP0
0000216019|REFSEQ:NP_006377 |H
- INV:HIT000008259;HIT00001500
4;HIT000026686;HIT000029762| V
EGA:OTTHUMP00000028920 Tax_Id=
9606 Splice Isoform 1 of Proba
ble ATP-dependent RNA helicase
DDX17
FlyBase FBgn0035720 9.99828570147986e-93 WormBase F58E10.3 1.00024349209755e-91 WBGene00010260 ATP-dependent h
elicase (DEAD box)
PlasmoDB PFL1310c 5.99971392284393e-73 Plasmodium falciparum PFL1310c
CryptoDB EAK87812 3.00148023798786e-60 Cryptosporidium parvum (Iowa)
protein EAK87812
General Information
No Data fetched for General Information
Associated Literature
- Ref:17519286: Yao MC, Yao CH, Halasz LM, Fuller P, Rexer CH, Wang SH, Jain R, Coyne RS, Chalker DL (2007) Identification of novel chromatin-associated proteins involved in programmed genome rearrangements in Tetrahymena. Journal of cell science 120(Pt 12):1978-89
Sequences
>TTHERM_00569290(coding)
ATGTGGGGAAATAGCTACAATAATAATAGTTCTAGTAATGGATACTCAAATAACAAAAGC
AACGGATATTCAAGCAGCAATAATAATGGAAACTCCTATGGAACCGGTGGCAAGTGGAAT
GATAACGGAGTTGGTTAAAATTTGGCTGCAATCGATTGGACAAAAGAAAATCTTACTACA
TTTTAGAAAGTTTTTTATAAGGAAAGTTAGAAAATAAGAACTGAAGAAGAAATCGAAGAA
TTTTACCGCCAGAACCACATCTCAGCCAAATCACCTCATGGAAAAGTACCTGACCCTTTT
TTAAGCTGGACAGATACTCACTTCCCTTAATATATTATGAATGAAGTTACTCACGCTAAA
TTTGAAAAACCCTCTCCTATTTAGTCTTTAGCATTCCCTGTAGTCCTTAGTGGTCACGAT
TTGATTGGTATTGCAGAAACAGGTAGTGGAAAAACTCTTTCCTTCCTTTTACCCTCAATA
GTTCATATTAATGCTCAACCAACTGTCAAAAAGGGAGATGGTCCTATCGTCCTCGTTCTT
GCTCCTACTAGAGAACTTGCTATGCAAATCGAAAGAGAGTCCGAAAGATTTGGTAAATCC
TCTAAGCTTAAATGTGCTTGTATCTATGGTGGTGCTGACAAATACTCCTAAAGAGCACTT
CTCCAATAAGGTGTAGATGTAGTTATTGCTACTCCTGGTAGACTTATTGACTTTTTAGAA
AGTGAAACTACTACTTTACGTAGAGTTACTTATCTCGTATTAGATGAAGCAGATAGAATG
TTAGATATGGGTTTTGAAATTTAAATTAGAAAAATCTTGGGTTAAATTAGACCTGATCGT
TAAACATTGATGTTTTCTGCTACCTGGCCTAAGAATGTTTAGAATCTTGCTTAAGATTAT
TGCAAGAATACTCCCGTTTATGTTCAAATCGGAAAACATGAATTAGCTATTAACGAAAGA
ATTAAATAAATTGTTTATGTTACAGATCAATCAAAGAAAATCAATCAACTTATCAAGCAA
TTAGATTGTTTGACTTAGAAAGATAAAGTATTGATTTTCGCTTAAACAAAGAAGGGATGT
GAAAGCATGAGTCGTATTTTGAATAAAGAAGGATTTAAGTGTCTTGCTATCCATGGTGAC
AAAGCCTAAAAAGACAGAGACTATGTTATGAACAAGTTCAAAAGCGGAGAATGCAGAATC
CTTATTGCTACAGACGTAGCCAGTAGAGGTTTGGATGTTAAGGATGTCTCCCACGTATTT
AATTACGATTTCCCAAAGGTTATGGAAGACTATGTCCATAGAATCGGTAGAACAGGTAGA
GCTGGAGCATATGGTTGTGCAGTATCTTTCCTTACTTTTGAAGATGATAAAAAGATATCA
AGGGAATATGTCCAAATGCTTCATGACGCTAAGTAAGAAATTCCCATTGATCTTCTTGAT
CTTGCTAGTATTAATCCCAGATACAGAACTTAATATAAAACTGTTTCCTCTTCATACTAT
GATATTAAGAAATTTAACAGTGCTGATACTTCAAAGCCTTCAGAAAATCAGAATGTTTCA
AATACTGCAAATAGCAGCGACAAGTACACCAGCAGTAGCAGCTACAATTAATATAAAAGC
AAAAAAGATGAAGATGACAAGAGAAGTAGAAGTAGAAGTCCATATAAATCTGAAAATAAC
AACAGATGGGATAAATATAATCGCACAAAAAGCCCAGAATACCGCAGTTCTAATGGATCT
TCTCATTATAACAACGTTAACAAGTATTCTTCAAATTCTAATAATAATTCAAGTTCATAT
TCAAAGAATTAATCCTCCACATCATCATCTTCTTCCTATGGATAGAATAATTAATCATCC
AATTTAATGAGTAAACCATCTAGTAAATTCTCTGCTCCTACAAATGGTAGTTACACAAAT
GGATTTTCTTCAGTCTAATAAAATTCTCAAGTTTAAAATCCATTTATGCCAATCAATCCT
TTACCTCAACCTTTTATGTACTAAATTCCTGGATTTAATGGTTTCCCTAATCAAGGTTTC
AATAACTTTTACACTGGTATGGTTCCTCCTCCTCCACTCCCTACTGGTGCTCCCTCATAA
TAATAAAATGGATTTGCTTAAAATACAACAACATCTTCTTGA>TTHERM_00569290(protein)
MWGNSYNNNSSSNGYSNNKSNGYSSSNNNGNSYGTGGKWNDNGVGQNLAAIDWTKENLTT
FQKVFYKESQKIRTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMNEVTHAK
FEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVL
APTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLE
SETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDY
CKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLIKQLDCLTQKDKVLIFAQTKKGC
ESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRGLDVKDVSHVF
NYDFPKVMEDYVHRIGRTGRAGAYGCAVSFLTFEDDKKISREYVQMLHDAKQEIPIDLLD
LASINPRYRTQYKTVSSSYYDIKKFNSADTSKPSENQNVSNTANSSDKYTSSSSYNQYKS
KKDEDDKRSRSRSPYKSENNNRWDKYNRTKSPEYRSSNGSSHYNNVNKYSSNSNNNSSSY
SKNQSSTSSSSSYGQNNQSSNLMSKPSSKFSAPTNGSYTNGFSSVQQNSQVQNPFMPINP
LPQPFMYQIPGFNGFPNQGFNNFYTGMVPPPPLPTGAPSQQQNGFAQNTTTSS>TTHERM_00569290(gene)
ATGTGGGGAAATAGCTACAATAATAATAGTTCTAGTAATGGATACTCAAATAACAAAAGC
AACGGATATTCAAGCAGCAATAATAATGGAAACTCCTATGGAACCGGTGGCAAGTAATAT
TTCTATTTCACTTTTCTTAAATTTTCTTATCTCTCTTAGCTCCTTTTAGGCTAAGAGCTT
AGCAAGATATTTAAATCAAAGTCTGGGACAATGATTTGAAACATTTCTATTTAAAAATTA
GGTGGAATGATAACGGAGTTGGTTAAAATTTGGCTGCAATCGATTGGACAAAAGAAAATC
TTACTACATTTTAGAAAGTTTTTTATAAGGAAAGTTAGAAAATAAGAACTGAAGAAGAAA
TCGAAGAATTTTACCGCCAGAACCACATCTCAGCCAAATCACCTCATGGAAAAGTACCTG
ACCCTTTTTTAAGCTGGACAGATACTCACTTCCCTTAATATATTATGAATGAAGTTACTC
ACGCTAAATTTGAAAAACCCTCTCCTATTTAGTCTTTAGGTATTGTTTGATTGAATTTAA
ACCAACAAACCAACCTACGATGGAACATTTTGAAACATAAATAAATAAATAAAAACCTAC
ACACATAGTTTGTTTAAAATATATTTGCAAAAAATAAACATTTAAACAAGCCAATTTCTA
CACTTAGCATACAAAATTCAAATCACAAACGAGTGTGTGTAATTTAATTAACAATATATA
TCAATGCGGGAATCAATCAATCAATGTTAAGAAGAAGCCAAAGGTTATTCCTTAAGAATA
AGCATCGCTCAATGTTTCCAAAGAGACCAATGTATTTATTCAATATGAATCTACTTGAAT
AAAGGTGAATTTATTCTTTCTGAGGGAATTATTGATCGAAGTGCTTATCATCCTCATTCT
TAATATTGTTTGTACAGCAGATTATTATCAGGAGGAGAACGAAATGGATCCAAAAAAGAT
AATCAGAGCTGAATGTAACTGTACTGTCATTTATCTTTTTGATTCATTTCAATTCTCTTG
AAAAACTGCATTTTCCCTTCAGAATTTTGATTTTCAAATCAATCATCCATTCTATTTCAC
ATTTCCATCTTAAAAAAGAAACAATCATCCCCGTCATTTATTTATTCCTTACAGCCAACA
AATTTCATTTATAAACTTATATTTATTTTAATAATCCTTCAGTATAACCATATAATTTGG
CTTTTTTGCTAAATTTTAAACACAAATCAATCAATCAATCAAAAATAAATTTAAATAGGA
TAGACAGATGTATCAATTTGCATATATTTAAAATAAATAGCCTTTGCAAATTTTCAAATT
TGCTTTATTATATAATTAATTTGTCTAATAACTTTAATCTAATTTTTTTTTTTTTCATTA
TTGATTGATAGAGGATTGACAAACAAAATTATCTTTTTTTTAAACAAATAATGAAATTTA
CAAGAGTTTGAAAAATCAAATTCTAAAGGGAAAATTATTTTTATCGCTCAATATTGTTTC
TTTTCATTATAGATTATTTTATCAAAAGCTCTATTTATTGGAAAAATTTACTTACCAATT
TATAGCTGATTAATAATTACTACTCACAAATGATTAAATATTTATAAGTTTGATTTTCCC
TAAAATTAACTAGCATTCCCTGTAGTCCTTAGTGGTCACGATTTGATTGGTATTGCAGAA
ACAGGTAGTGGAAAAACTCTTTCCTTCCTTTTACCCTCAATAGTTCATATTAATGCTCAA
CCAACTGTCAAAAAGGGAGATGGTCCTATCGTCCTCGTTCTTGCTCCTACTAGAGAACTT
GCTATGCAAATCGAAAGAGAGTCCGAAAGATTTGGTAAATCCTCTAAGCTTAAATGTGCT
TGTATCTATGGTGGTGCTGACAAATACTCCTAAAGAGCACTTCTCCAATAAGGTGTAGAT
GTAGTTATTGCTACTCCTGGTAAATATATATCAACATTTGAACACTTTTAACCAACTTTC
AAATAAATTTCTTAAATTAAACTTTTTTTTAATTTAAATTACAGGTAGACTTATTGACTT
TTTAGAAAGTGAAACTACTACTTTACGTAGAGTTACTTATCTCGTATTAGATGAAGCAGA
TAGAATGTTAGATATGGGTTTTGAAATTTAAATTAGAAAAATCTTGGGTTAAATTAGACC
TGATCGTTAAACATTGATGTTTTCTGCTACCTGGCCTAAGAATGTTTAGAATCTTGCTTA
AGATTATTGCAAGAATACTCCCGTTTATGTTCAAATCGGAAAACATGAATTAGCTATTAA
CGAAAGAATTAAATAAATTGTTTATGTTACAGATCAATCAAAGAAAATCAATCAGTATTT
AAATATTTTAACAATTATTTTTTCAATTATCTAAATATTCTTTTTTAATTAATAGACTTA
TCAAGCAATTAGATTGTTTGACTTAGAAAGATAAAGTATTGATTTTCGCTTAAACAAAGA
AGGGATGTGAAAGCATGAGTCGTATTTTGAATAAAGAAGGATTTAAGTGTCTTGCTATCC
ATGGTGACAAAGCCTAAAAAGACAGAGACTATGTTATGAACAAGTTCAAAAGCGGAGAAT
GCAGAATCCTTATTGCTACAGACGTAGCCAGTAGAGGTTTGGATGTTAAGGATGTCTCCC
ACGTATTTAATTACGATTTCCCAAAGGTTATGGAAGACTATGTCCATAGAATCGGTAGAA
CAGGTAGAGCTGGAGCATATGGTTGTGCAGTATCTTTCCTTACTTTTGAAGATGATAAAA
AGATATCAAGGGAATATGTCCAAATGCTTCATGACGCTAAGTAAGAAATTCCCATTGATC
TTCTTGATCTTGCTAGTATTAGTAATTATTTATTAATATGAATTCAATTCTAAATTTTTT
ACTTAAATAAAATAGATCCCAGATACAGAACTTAATATAAAACTGTTTCCTCTTCATACT
ATGATATTAAGAAATTTAACAGTGCTGATACTTCAAAGCCTTCAGAAAATCAGAATGTTT
CAAATACTGCAAATAGCAGCGACAAGTACACCAGCAGTAGCAGCTACAATTAATATAAAA
GCAAAAAAGATGAAGATGACAAGAGAAGTAGAAGTAGAAGTCCATATAAATCTGAAAATA
ACAACAGATGGGATAAATATAATCGCACAAAAAGCCCAGAATACCGCAGTTCTAATGGAT
CTTCTCATTATAACAACGTTAACAAGTATTCTTCAAATTCTAATAATAATTCAAGTTCAT
ATTCAAAGAATTAATCCTCCACATCATCATCTTCTTCCTATGGATAGAATAATTAATCAT
CCAATTTAATGAGTAAACCATCTAGTAAATTCTCTGCTCCTACAAATGGTAGTTACACAA
ATGGATTTTCTTCAGTCTAATAAAATTCTCAAGTTTAAAATCCATTTATGCCAATCAATC
CTTTACCTCAACCTTTTATGTACTAAATTCCTGGATTTAATGGTTTCCCTAATCAAGGTT
TCAATAACTTTTACACTGGTATGGTTCCTCCTCCTCCACTCCCTACTGGTGCTCCCTCAT
AATAATAAAATGGATTTGCTTAAAATACAACAACATCTTCTTGA
