Identifiers and Description

Gene Model Identifier

TTHERM_00030210

Standard Name

LC7B

Aliases

PreTt14252 | 2.m02399 | 3825.m02639

Description

Dynein light chain 2B, cytoplasmic, putative, Light chain subunit of ciliary three-headed outer arm dynein (OAD), two-headed inner arm dynein (IAD) complex 1, and non-axonemal dynein complex 1

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• cytoplasmic dynein complex (ISS) | GO:0005868 | Ref:16933976
• inner dynein arm (ISS) | GO:0036156 | Ref:16933976
• outer dynein arm (ISS) | GO:0036157 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.3%

TetraMine Data

TTHERM_00030210

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00811.1	4.001968334034435e-68	dynein light chain 2B, cytopla smic (104 aa)
Oxytricha	Contig16690.0.g70	2.999534586690157e-23	Roadblock/LC7 domain
WormBase	WBGene00012004	4.997543945741262e-17	locus:dyrb-1 status:Confirme d UniProt:Q22752 protein_i d:CAA90946.1
DictyBase	DDB_G0285855	0.000000000000020000882446601127	dlcC on chromosome: 4 position 3725623 to 3726100

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00030210(coding)
ATGATCTATAAAACTTCAAAAGAAATTTAAAAGAGTGACTAAAGAATAATTTAATAAAGA
GTAGAGAATTCAATTATTAATAATCAAATATATCAAAAATCTCTTAAGCGAAAAACAAGC
AAAAGAAAAGTAAGGCACTAAGCAAACAAAAAAAATTTTTAAAAAGAAATGTCTGAAGTT
GAGGATACTTTAAATAGAATAAAGACACATAAAACAGTTTTAGGCTACTTGATTGTTAAT
AGTGAAGGTGGTGTTGTTAGAGGTGCCTTTAAGGATGAGGAAGAAAGCAAAAATATCGCA
AATTCAATTCCTCTACTCACAAAAAAGGCTCGCTCTGTTGTAAGAGACTTAGACCCTACA
AATGATTTAGTTTTCTTGCGTATATAAACTAAGCTTAATGAGATTATGGTTGCTCCTGAT
GATGAATTCTCTTTAATCGTAATATAAACTAAAGGTGAAAAGCGTGATGAAAACGATTGA

>TTHERM_00030210(protein)
MIYKTSKEIQKSDQRIIQQRVENSIINNQIYQKSLKRKTSKRKVRHQANKKNFQKEMSEV
EDTLNRIKTHKTVLGYLIVNSEGGVVRGAFKDEEESKNIANSIPLLTKKARSVVRDLDPT
NDLVFLRIQTKLNEIMVAPDDEFSLIVIQTKGEKRDEND

>TTHERM_00030210(gene)
ATGATCTATAAAACTTCAAAAGAAATTTAAAAGAGTGACTAAAGAATAATTTAATAAAGA
GTAGAGAATTCAATTATTAATAATCAAATATATCAAAAATCTCTTAAGCGAAAAACAAGC
AAAAGAAAAGTAAGGCACTAAGCAAACAAAAAAAATTTTTAAAAAGAAATGTCTGAAGTT
GAGGATACTTTAAATAGAATAAAGACACATAAAACAGTTTTAGGCTACTTGATTGTTAAT
AGTGAAGGTGGTGTTGTTAGAGGTGCCTTTAAGGATGAGGAAGAAAGCAAAAATATCGCA
AATTCAATTCCTCTACTCACAAAAAAGGCTCGCTCTGTTGTAAGAGACTTAGACCCTACA
AATGATTTAGTTTTCTTGCGTATATAAACTAAGCTTAATGAGATTATGGTTGCTCCTGAT
GATGAATTCTCTTTAATCGTAATATAAACTAAAGGTGAAAAGCGTGATGAAAACGATTGA