Identifiers and Description

Gene Model Identifier

TTHERM_00152040

Standard Name

LC7A

Aliases

PreTt20862 | 12.m00536 | 3700.m00255

Description

Light chain subunit of ciliary three-headed outer arm dynein (OAD), two-headed inner arm dynein (IAD) complex 1, and non-axonemal dynein complex 1

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• cytoplasmic dynein complex (ISS) | GO:0005868 | Ref:16933976
• inner dynein arm (ISS) | GO:0036156 | Ref:16933976
• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• outer dynein arm (ISS) | GO:0036157 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976
• microtubule-based process (ISS) | GO:0007017 | Ref:16933976

Domains

• ( PF03259 ) Roadblock/LC7 domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.9%

TetraMine Data

TTHERM_00152040

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_05152.1	5.999140071902665e-66	dynein light chain 2B, cytopla smic (106 aa)
Oxytricha	Contig16690.0.g70	8.001486403440551e-25	Roadblock/LC7 domain
WormBase	WBGene00012004	4.999245259173412e-21	locus:dyrb-1 status:Confirme d UniProt:Q22752 protein_i d:CAA90946.1
DictyBase	DDB_G0285855	1.999598840915195e-17	dlcC on chromosome: 4 position 3725623 to 3726100

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00152040(coding)
ATGTCTGAAGTTGAAGAAACCCTTAATAGAATCAAAACCCATAAATCAGTTTAAGGAATT
GTTATCGTTAATAATGAAGGTAATATTATCAGAACCACATATGAAGGAGATTAAAAAAGT
TTAGGTGAAAAGATTGCCATTAACATACCTTAATTGGCAGCTAAGGCAAAATCTACTGTC
AGAGATCTTGATGAGAATAATCATTTAGTATTTCTGAGAATTAAATCTGATCGTAACGAA
ATAATGGTTGCCCCTGATAAAGATTTTATGCTTATAGTTGTTTAAGGTAAAAGTGATAAA
AAGGAAGATGCTGATTGA

>TTHERM_00152040(protein)
MSEVEETLNRIKTHKSVQGIVIVNNEGNIIRTTYEGDQKSLGEKIAINIPQLAAKAKSTV
RDLDENNHLVFLRIKSDRNEIMVAPDKDFMLIVVQGKSDKKEDAD

>TTHERM_00152040(gene)
ATGTCTGAAGTTGAAGAAACCCTTAATAGAATCAAAACCCATAAATCAGTTTAAGGAATT
GTTATCGTTAATAATGAAGGTAATATTATCAGAACCACATATGAAGGAGATTAAAAAAGT
TTAGGTGAAAAGATTGCCATTAACATACCTTAATTGGCAGCTAAGGCAAAATCTACTGTC
AGAGATCTTGATGAGAATAATCATTTAGTATTTCTGAGAATTAAATCTGATCGTAACGAA
ATAATGGTTGCCCCTGATAAAGATTTTATGCTTATAGTTGTTTAAGGTAAAAGTGATAAA
AAGGAAGATGCTGATTGA