Identifiers and Description

Gene Model Identifier

TTHERM_01075620

Standard Name

LC4A (Light chain subunit of ciliary three-headed outer ... )

Aliases

PreTt02674 | 219.m00027

Description

LC4A dynein 18 kDa light chain flagellar outer arm protein; Light chain subunit of ciliary three-headed outer arm dynein (OAD)

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• outer dynein arm (ISS) | GO:0036157 | Ref:16933976
• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• axonemal dynein complex (ISS) | GO:0005858 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based process (ISS) | GO:0007017 | Ref:16933976
• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976
• cilium movement (ISS) | GO:0003341 | Ref:16933976

Domains

• ( PF00036 ) EF hand

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.9%

TetraMine Data

TTHERM_01075620

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_15342.1	1.9992560499818233e-109	EF hand family protein (161 aa )
Oxytricha	Contig22680.0.g50	1.0002335610448659e-38	EF hand
Stentor Coeruleus	SteCoe_5094	7.781132241133797e-20
SGD	YBR109C	0.000000000000001999258566166494	CMD1 Calmodulin; Ca++ binding protein that regulates Ca++ in dependent processes (mitosis, bud growth, actin organization , endocytosis, etc.) and Ca++ dependent processes (stress-ac tivated pathways), targets inc lude Nuf1p, Myo2p and calcineu rin
WormBase	WBGene00000552	0.00000000000004998767099442072	locus:cmd-1 Calmodulin sta tus:Confirmed UniProt:O16305 protein_id:CCD69969.1
DictyBase	DDB_G0279407	0.0000000000008001317446409227	calA on chromosome: 3 position 2244074 to 2245039

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01075620(coding)
ATGGCGAGTGAAGTTATGAACTTATCTGAAGAAGATATCTAGTTCTGCCAGAAAGCTTTC
TCTGATTATGATGAAGATGGATTAGGAGCTATTAAGGTTTCTGATTTGAAGCTTGCTTTA
GAGAATATAGGATGTTCTCTTAGCGAAAACGATTTATTTAAAATGATTAGTGAGGTTGAT
GAGAAGAATACAGGTCTCATCAAGTTTTCTGATTTTTTGAATATTTATTACAAATAAAAA
TATGCAAATCTTGGAGATGATGATTAGGATTTAGTTGATGCTTTTGTGGCTATGGGCGGT
AATGCCGATACCACAGGCTCCGTAGATGCAAACCGTCTCATATAAATAGTAAAAGAAGAG
TTCGAAATGACTATTGACATAGTTGGATTGATTCGTGAAATTGATAAGGATGGATCTGGA
GAAATCGAATATGAAGAATTTAAATTGCTTCTCAAATCAGGTTTTGCTAATGAGGGAAAC
TGA

>TTHERM_01075620(protein)
MASEVMNLSEEDIQFCQKAFSDYDEDGLGAIKVSDLKLALENIGCSLSENDLFKMISEVD
EKNTGLIKFSDFLNIYYKQKYANLGDDDQDLVDAFVAMGGNADTTGSVDANRLIQIVKEE
FEMTIDIVGLIREIDKDGSGEIEYEEFKLLLKSGFANEGN

>TTHERM_01075620(gene)
ATGGCGAGTGAAGTTATGAACTTATCTGAAGAAGATATCTAGTTCTGCCAGAAAGCTTTC
TCTGATTATGATGAAGATGGATTAGGAGCTATTAAGGTTTCTGATTTGAAGCTTGCTTTA
GAGAATATAGGATGTTCTCTTAGCGAAAACGATTTATTTAAAATGATTAGTGAGGTTGAT
GAGAAGAATACAGGTCTCATCAAGTTTTCTGATTTTTTGAATATTTATTACAAATAAAAA
TATGCAAATCTTGGAGATGATGATTAGGATTTAGTTGATGCTTTTGTGGCTATGGGCGGT
AATGCCGATACCACAGGCTCCGTAGATGCAAACCGTCTCATATAAATAGTAAAAGAAGAG
TTCGAAGTAAAAAATTAAATTAATTTTTTTCTTTCTCTATAATAAAGATAACTTTCATTC
AAAACTTTACAAAACAATTTGCAAAAATTTTATGATAATTGTTCAAATGTTTTTTGCTTA
TCACCTAGACCAAATCCGAATTCTTTTTTCTATAGAATTGGGTAGACCAGTGAACAAAAA
TAAATAAATATCTTTAAAATTACAAAATTAATTTCTATCTTTAATTAATAAAACTGTTTT
GATAATATTTTAGATGACTATTGACATAGTTGGATTGATTCGTGAAATTGATAAGGATGG
ATCTGGAGAAATCGAATATGAAGAATTTAAATTGCTTCTCAAATCAGGTTTTGCTAATGA
GGGAAACTGA